Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre06g2320 ATGACCGATAGCGCTAAATCAATTCTCCAAGAGGAGACTTCGAAGCTCGAAACCAAGTCCAAGCGCGGCTCAGATGTCGAAGATGCTGATGTTACTGTGAAGAAGTTTAAAACGGAAGCTTCTGCCAATGAAACTGGACTCTGTACCGGTAGAAACTTGGAAGCTGTTAATGGTGACGAAGAACTTAAGGTCATCAGGAGGGGACTCGAGTTTGAAATTGAAGCGGATGCGGCCGAGGATAAAGGGTCTAGGCATACAATGGAAGATGCCTGGGTTTTGCTCTTGGATGCCAGCTTGGATTTTCCTGGGAAATTGAGATGTGCACATTTTGCTATCTATGATGGACACGGGGGTCGGTTAGCTGCCGAGCACGCTCAAAAGCATTTGCACAAGAATGTTCTCTCGGCCGGGTTACCACGTGAGTTGTTGGATGTAAAAGCAACTAAAAAGGCAATACTTGATGGGTTCCGGAAAACGGACGAGTCTCTTCTTCAAGAAAGTTCTGCAGGGGGATGGCAGGATGGTGCTACTGCTGTTTGCGTTTGGGTCTTAGGTCAAACAGTTTTTGTTGCTAATGTTGGTGATGCTAAAGCAGTTGTAGCCCGATCTTTGACTACTGATAAATCGACGAATAATCCTAATGGTGGAAGCTCTTTAAAGGCTATCGTTTTGACAAGGGAACATAAGGCAATCTACCCACAGGAGAGAGCTCGCATTCAAAAGGCTGGTGGCGTTGTTGGTTCAAACGGTCGATTGCAGGGTCGTCTTGAAGTTTCTCGGGCATTCGGAGATCGCCAATTTAAAAAGTTGGGTGTTATCGCAACTCCAGACATTCATTCTTTTGAATTGACTGATAGGGAGCATTTTATCATTCTTGGATGCGATGGACTTTGGGGGGTTTTTGGACCAAGTGATGCCGTTGATTTTGTCCAGAAATTATTGAAGGATGGCCTGCCCATAGCATCAATAAGTCGACGTCTCGTGAGGGAAGCAATTCGTGAACGGCGCTGCAAAGATAACTTTGCATTTCTTGAATATGCTTTTCTCTTGGTGGAAGAATCTCATGATTGGAAAGGATTTCACATTGTGTCAAGAGTTGCTTTAAACATTGGTGTTAGTAAAGTCGTTTATCCGGTGTATCGAAACGCGATAGCCTTAGCTCTGTTGAGTCCTTTTGCTTATTTTCTAGAGAAGAATGAAAGGCCACCTCTTACTTTCTCTTTGCTGTTTCAGTTCTTCCTTCTAGCTTTATTGGGAATTACTGCCAATCAAGGATTCTATCTCTTGGGGCTAAACTATGCATCTCCAACATTTGCTTCTGCAATGCAAAACTCAGTGCCTGCTATTACCTTTGTAATGGCTTGTGTTCTGAGACTTGAGCAAGTCAACTTCAGAAGAAGTGATGGTTTGGCAAAGATTTTGGGAACCATTGGGAGTGTTGGTGGTGCAACTGTGATCACTCTCTATAGAGGCCCTCCACTTCTCCACAACAACTACCTAACTCAAGGAAGTAGCATCTTAGAGATGGATGACCCAACAATTAAAGTGCAAAATTGGAGATGGGGTTGTATTTACCTGCTAGGCCACTGCCTTTCTTGGGCTGGTTGGATGGTTTTTCAGGCTTCTCTATTGAAAAAGTATCCAGCAAAACTAACAATAACTTCATACACATGCTTCTTTGGACTGATCCAATTCCTAGTCATAGCTGGCTTTGTGGAAACAGATTATCAGTACTGGAAAATCCAATCTGCTGAAGAACTCTTCACAATCTTATATGCTGGTGTTGTAGCTTCTGGCATTGTCTTCTCTCTCCAAACATGGTGCATCCACAAGAGTGATCCTGTTTTTGTTGCTGTCTTCCAGCCTCTCCAAACTTTCCTAGTAGCCATCATGGCATTTCTCATCCTCGGCGATCGGTTATTCTCCGGCGGGGTTATTGGTGCTGTTCTTATAACACTTGGGCTTTACTCAGTTCTGTGGGGAAAAAGTAAAGAAAAGGCATTGGAAGAAGAAGAAGATAAGTGTTTAAAACATCCCCTTTTGGATGCTCAAAAAGGAGACAAAGAAGACAATGTTGTTTCAGACATACCATGA 2094 43.65 MTDSAKSILQEETSKLETKSKRGSDVEDADVTVKKFKTEASANETGLCTGRNLEAVNGDEELKVIRRGLEFEIEADAAEDKGSRHTMEDAWVLLLDASLDFPGKLRCAHFAIYDGHGGRLAAEHAQKHLHKNVLSAGLPRELLDVKATKKAILDGFRKTDESLLQESSAGGWQDGATAVCVWVLGQTVFVANVGDAKAVVARSLTTDKSTNNPNGGSSLKAIVLTREHKAIYPQERARIQKAGGVVGSNGRLQGRLEVSRAFGDRQFKKLGVIATPDIHSFELTDREHFIILGCDGLWGVFGPSDAVDFVQKLLKDGLPIASISRRLVREAIRERRCKDNFAFLEYAFLLVEESHDWKGFHIVSRVALNIGVSKVVYPVYRNAIALALLSPFAYFLEKNERPPLTFSLLFQFFLLALLGITANQGFYLLGLNYASPTFASAMQNSVPAITFVMACVLRLEQVNFRRSDGLAKILGTIGSVGGATVITLYRGPPLLHNNYLTQGSSILEMDDPTIKVQNWRWGCIYLLGHCLSWAGWMVFQASLLKKYPAKLTITSYTCFFGLIQFLVIAGFVETDYQYWKIQSAEELFTILYAGVVASGIVFSLQTWCIHKSDPVFVAVFQPLQTFLVAIMAFLILGDRLFSGGVIGAVLITLGLYSVLWGKSKEKALEEEEDKCLKHPLLDAQKGDKEDNVVSDIP 697
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 31148932 31161275 + CrPI670011_06g023200.1 Cre06g2320 501782
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre06g2320 697 CDD PP2Cc 78 340 IPR001932 -
Cre06g2320 697 SMART PP2C_4 70 346 IPR001932 -
Cre06g2320 697 MobiDBLite consensus disorder prediction 10 28 - -
Cre06g2320 697 SUPERFAMILY PP2C-like 72 341 IPR036457 -
Cre06g2320 697 Gene3D - 60 348 IPR036457 -
Cre06g2320 697 PANTHER WAT1-RELATED PROTEIN 359 671 IPR030184 GO:0005886(PANTHER)|GO:0016020(InterPro)|GO:0022857(InterPro)
Cre06g2320 697 Pfam EamA-like transporter family 521 659 IPR000620 GO:0016020(InterPro)
Cre06g2320 697 Pfam EamA-like transporter family 379 466 IPR000620 GO:0016020(InterPro)
Cre06g2320 697 Pfam Protein phosphatase 2C 79 336 IPR001932 -
Cre06g2320 697 SUPERFAMILY Multidrug resistance efflux transporter EmrE 380 475 - -
Cre06g2320 697 MobiDBLite consensus disorder prediction 1 28 - -
Cre06g2320 697 SUPERFAMILY Multidrug resistance efflux transporter EmrE 576 664 - -
Cre06g2320 697 ProSiteProfiles PPM-type phosphatase domain profile. 74 348 IPR001932 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre05g2033 Cre-Chr5:32340675 Cre06g2320 Cre-Chr6:31148932 4.80E-101 dispersed
Cre06g2320 Cre-Chr6:31148932 Cre11g1745 Cre-Chr11:29068755 1.10E-60 dispersed
Cre06g2320 Cre-Chr6:31148932 Cre08g1412 Cre-Chr8:27110485 1.80E-106 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre06g2320 K17500 - csv:101210826 624.78