Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre06g2459 ATGGCGCTGTTCAGAAGGTTCTTTTACAAGAAGCCGCCGGATCGGCTTCTTGAGATCTCCGAGAGAGTCTATGTGTTTGATTGTTGCTTCTCCACGGAAGTGTTGGAAGAAGAAGAATATAAGGTCTACTTGGATGGCATTGTAGCACAGTTACAGAGCCACTTTCCTGATGCCTCATTCATGGTTTTCAACTTCAGAGAAGGTGGTAGGCGAAGTCAAATTTCTGATGTACTGACTCAGTATGACATGACAGTTATGGACTATCCTCGGCAATATGAGGGGTGTCCTTTATTGCCATTGGAGATGATTCACCACTTCCTTCGATCAAGTGAAAGCTGGTTGTCACTGGAGGGTCAACAGAATGTGCTATTGATGCATTGTGAAAGAGGAGGATGGCCTGTTCTTGCATTCATGCTAGCTGGTCTTCTCTTGTACAGGAAACAATACAGTGGGGAGCAGAAGACTCTTGAAATGGTCTACAAGCAAGCTCCTAAGGAACTTCTCCATCTTTTGTCTCCTTTAAATCCTCAGCCTTCCCAGCTGAGATATCTTCAATACATTTCCAGGAGAAATTTAGGTTCTGATTGGCCTCCATCGGATACACCTCTAGTTTTGGATTGTTTAATACTAAGAGTTTTACCTCTTTTTGATGGGGGAAAAGGATGTAGGCCTGTTGTGCGTGTTTATGGTCAAGACCCCTCAGCACCGGCCAATAGAACTTCAAAGCTTTTATTTTCGACATCAATCAAAAGAAAACATATCCGCAACTACCTACAGGCAGAGTGTATGCTGGTGAAAATTGATATTCATTGCCATGTTCAAGGGGACGTAGTTCTTGAATGCATCCATATGGATGAAGATCTAGTACACGAGGAGATGATGTTTAGAGTTATGTTTCACACAGCATTTGTTAGATCAAACATAATGATGCTGAACCGTGATGAAGTTGATGTTTTATGGGATGCGAGGGAGCAGTATCCCAAGGACTTCAGAGTTGAGGCACTCTTTTTGGATGCTGATGCTGTTGTCCCCAGTCTCACCACATCCTTCGATGATGAAGATGGAAATGAAACTGGAGCTGCTTCTCCTGAAGAATTTTTTGAGGTCGAAGAGATCTTCAGTAGTGTAATTGATGGGCAGGAAGCAAAGGGGTCCAGTGATCCTCAAGTAGTCAATCATATAAACCGTAAAGAAGATTGGAAGGAGGACTTCGATCCTCCTGCATTCCAGGATTGTGACGATGGAAATATTAAGCATGATAAGAAATCAGATTTTGATGCAGTGAAGGACATTACTGTGGATGATGTGAAGTACAAACTGGATGAAAATATATATTCTGATCTTAATGCAGTTAAGGACATTGCTGTGGATGATGGGGATATGAATTCAAATTCCTTTTTGGTTGCTGCTAATGTCCCGACTCATGTGAAAATCCAGGGGTTGGTGGATGATGCATACGAGAAATGTGAAGATATGGAAGAAAAGGATGATGGAAGAGATACTACACCTGAGAAATTGGAAAACAAGGTTCTGCAGAAAAAGTTGAGTGCTGATGGTTCTAGACAAAAATCAGAAAAATTGCAAACACCGATTCCCAAGAAACAGCCTATTTCAAGTGGAAAACCGACCGCTGATATGGGTTTAGCCAAACAGAAAGTCAAACAACAAGAGACTCAAGGTTTCTCTGGAAAACAAGCGAAGCCAAATGCAGTTTCTAGGTGGATCCCTCCTAACAAAGGCTCCTATATGAATTCTATGCATGTTTCCTATCCACCTTCAAGATATAACAGTGCCCCAGCTGCTTTGGCAAGTATTGCATCATCGAAGGATGTAAATGCAAATTCCAAAACGAAGGCTGCTGCCACTACTGATTCTCTGGTTGCTACAGATGTTTTTACTGAACGAAAAAACTATGAAGTGGATTCTGTGAGGCCTTCACACTCCGCCCCTGGGAACCTCATGCTTGGCCCATCATCTCCAGTTGAGTCAATTGAGGAGACATATTCTTCCTCTGAAACTTTAAAACCATCACATAGTGATGCACAACTTGGAGTACCACTTCCCCCCCTGCCCACAAAGCCTCCATCTCCATATTTACCATCACCCCCCCGGGCAAATGAAATACCTCCTCCACCTCCTCCACCTCCTCCACCACCCACTTCATTTCATCATATAGCTACAAGGTCCTCTGCTCTACCACTTTCCGTGTCTTTAGCACCACCACACATAGTTAACTCACCAAAGGCAGTGAATACCCCTGCCCCTGCCCCTCCCCCTCCCCCTCCATCTAGTAGGCAGAATAGTGTTTTGCCCCATTCTTCAACACAACCATCATGGGAGCAAATATATTCTTCCGTTTCTACTGGAACAGTGACTGGTTCTATACCTCCTCCACCCCCACCTTCCTCTGTGGGCATGCCATCTACATTAAAGAATATTGTAAGTACTTCTCCTGTACCTGTTTTGTCACCTCTTTCAGCCCTACTTGCCTCATCACATAAAGGGATATCACTACCCCCACCCCCACCCCCACCTCCCCCTCCTCCACCTTCTATGAAACATGAAGCACTTGTTCCACCACCTCCTCCACCCCCGCCTCCACCGCCCCCACCCCCACCCCCATTAGTGCATGGGGCATTTCCTTCACCATCTCTAATGAAAACAGCACCACCCCCACCCTTGCATAGTGCATCTCCAGCACTACCTTTATTACATGGAGCCCCACCTCCACCATCTCCACCACCTTCAAAGCAGAGAGCATCACCTCCGCCACCTCCTCCTCCGCCACCTTCCATATACGGAGCCCCACCTCAGCCACCTCCTCCCCCACCACCTGCCGTGTACGGAGCCCCACCTCAGCCACCTCCTCCCCCACCACCTGCCGTGTATGGAGCCCCACCTTCACCACCTCCTCCCCCACCACCTGCCGTGTACGGAGCCCCACCTCCACCACCTCCTCCCCCACCACCTGTCGTGTACGGAGCCCCACCTCCACCACCTCCTCCCCCACCACCTGCCGTGTACGGAGCCCCACCTCCACCACCTCCTCCCCCACCACCTGCCGTGTACGGAGCCCCACCTCCACCACCTCCTCCTCCACCACCTTCCATGTACGGAGCCCCACCTCCACCACCTCCTCCTCCACCACCTTCCATGTATGCAGCCTCACCCCCACCACCTCCTCCCCCACCACCTTCCATGTATGGAGCCTCACCTCCACCACCTTCTATACATGGAGCCCCACCCCCACCTCCCCCACCACCTTCGATGTTTGGTGCAACTCCTCCTTTGACCCCTACAATGCGGGGGGTACCCCCTCCTCCTCCACCCTCCTCGATGCGTGGGGCTCCTCCACCCCCTCCACCTCCACCAATGCGTGAGGCTCCTCCACCGCCACCCTCCTTGCGTGGGGCTCCCCCACCACCGCCACCTCCACCTATGCATGGGGCTCCTCCACCACCACCACCACCACCACCTCCACCAATGCATGGGGCTCCTCCTCCACCACCACCTCCTCCAATGCATGGGGCTCCACCACCACCACCTCCTCCGATACGTGGGGCTCTTCCCCCACCACCACCCCCTCCAATGCATGGGGCTCCTCCACCACCGCCCCCTCCAATGCATGGAGCCCCTCCCCCACCGCCACCACCCGGGGGTGGTAGAGCCCCTCCCCCACCGCCCCCGCCCGGGGGTGGTAGAGCCCCTCCCCCTCCTCCCCCGCCCGGGGGTGGTAGAGCCCCTCCCCCACCTCCCCCGCCCGGGGGTGGTGGAGCACCAGCACCACCTCCCCCTCCTGGTGGAGGTCGTGGAGCACCTGCCCCTCCTAGACCTCCTGGTGTTGGACCTCCTCCACCTCCACCACTAGGTGCTAAAGGAGCAAATGCTCCACCTGACCCGAGAGGTTTGTCTTCTGGGAGAGGGCGTGGGCTAACACGCTCTACAGCTACAGCACCTCGAAGGTCCTCCTTGAAACCTCTACATTGGAGCAAAGTAACGAGGGCTCTGCAAGGGAGCTTGTGGGAAGAACTACAAAGATACGGCGAGCCTCAAATTGCTCCAGAGTTTGATGTGTCTGAGTTAGAGACTCTCTTTTCTGCAACTGTCCCCAAACCTGCTGATAAATCTGGAGGGCGAAGGAAGTCTGTTGGATCCAAAACTGACAAAGTTCACCTGATTGACCTCAGGAGAGCTAATAACACCGAAATTATGCTCACCAAAGTAAAGATGCCACTTCCTGATATGATGGCTGCAGTGCTAGCAATGGATGAGTCAGTTTTAGATGTTGATCAGGTGGAAAATCTCATAAAATTTTGTCCTACGAAGGAGGAGATGGAACTTCTTAAGGGATACACTGGTGATATGGATAACCTTGGAAAGTGTGAACAGTATTTTTTGGAGCTGATGAAAGTGCCTCGAGTAGAGTCAAAGATGAGAGTGTTTTCTTTTAAGATACAGTTCGGCTCTCAGATATCAGAATTTAAGAAGAGTTTAAATACTGTCAACTCTGCATGTGATGAGGTTAGGAATTCTACCAAATTGAAGGAGATTATGAAGAAAATTCTTTATCTGGGGAATACATTGAATCAAGGAACAGCAAGGGGTTCTGCAGTTGGCTTCAAGCTGGACAGTCTTTTAAAGCTTGCTGATACACGTGCTTCTAATAATAAGATGACACTCATGCACTATCTTTGCAAGGTCCTCGCTTCAAAGACACCAGCTCTTCTAAATTTTCATTTGGACCTGGGTAGCCTCGAGCCAGCAACCAAGATACAATTGAAATCTTTAGCAGAAGAAATGCAAGCTATAATTAAGGGGTTAGAAAAGGTCAGGCAGGAGCTTGTTGCTTCTGAAAGTGATGGTCCAGTCTCTGAAGTTTTTCGCAAGACGCTGAAAGAATTTATTGCTATTGCTGAGACAGAGGTGACATCTGTGACAAATCTATACTCTACTGTGGGTAGAAATGCAGATGCACTTGCACTATATTTTGGTGAGGATCCGGCTCGTTGTCCATTTGAGCAGGTTACAGTGACACTATTGAACTTCGTGAGATTATTTCGGAAAGCCCACGAAGAAAACTGCAAACAGGCTGAATTGGAAAAGAAAAAGGCCGAGAAGGAAGCCGAAATGGAGAATGCCAAAGGAATTAGCCTTACGAAGAAGAGTGTGAAATAG 5175 49.47 MALFRRFFYKKPPDRLLEISERVYVFDCCFSTEVLEEEEYKVYLDGIVAQLQSHFPDASFMVFNFREGGRRSQISDVLTQYDMTVMDYPRQYEGCPLLPLEMIHHFLRSSESWLSLEGQQNVLLMHCERGGWPVLAFMLAGLLLYRKQYSGEQKTLEMVYKQAPKELLHLLSPLNPQPSQLRYLQYISRRNLGSDWPPSDTPLVLDCLILRVLPLFDGGKGCRPVVRVYGQDPSAPANRTSKLLFSTSIKRKHIRNYLQAECMLVKIDIHCHVQGDVVLECIHMDEDLVHEEMMFRVMFHTAFVRSNIMMLNRDEVDVLWDAREQYPKDFRVEALFLDADAVVPSLTTSFDDEDGNETGAASPEEFFEVEEIFSSVIDGQEAKGSSDPQVVNHINRKEDWKEDFDPPAFQDCDDGNIKHDKKSDFDAVKDITVDDVKYKLDENIYSDLNAVKDIAVDDGDMNSNSFLVAANVPTHVKIQGLVDDAYEKCEDMEEKDDGRDTTPEKLENKVLQKKLSADGSRQKSEKLQTPIPKKQPISSGKPTADMGLAKQKVKQQETQGFSGKQAKPNAVSRWIPPNKGSYMNSMHVSYPPSRYNSAPAALASIASSKDVNANSKTKAAATTDSLVATDVFTERKNYEVDSVRPSHSAPGNLMLGPSSPVESIEETYSSSETLKPSHSDAQLGVPLPPLPTKPPSPYLPSPPRANEIPPPPPPPPPPPTSFHHIATRSSALPLSVSLAPPHIVNSPKAVNTPAPAPPPPPPSSRQNSVLPHSSTQPSWEQIYSSVSTGTVTGSIPPPPPPSSVGMPSTLKNIVSTSPVPVLSPLSALLASSHKGISLPPPPPPPPPPPPSMKHEALVPPPPPPPPPPPPPPPPLVHGAFPSPSLMKTAPPPPLHSASPALPLLHGAPPPPSPPPSKQRASPPPPPPPPPSIYGAPPQPPPPPPPAVYGAPPQPPPPPPPAVYGAPPSPPPPPPPAVYGAPPPPPPPPPPVVYGAPPPPPPPPPPAVYGAPPPPPPPPPPAVYGAPPPPPPPPPPSMYGAPPPPPPPPPPSMYAASPPPPPPPPPSMYGASPPPPSIHGAPPPPPPPPSMFGATPPLTPTMRGVPPPPPPSSMRGAPPPPPPPPMREAPPPPPSLRGAPPPPPPPPMHGAPPPPPPPPPPPMHGAPPPPPPPPMHGAPPPPPPPIRGALPPPPPPPMHGAPPPPPPPMHGAPPPPPPPGGGRAPPPPPPPGGGRAPPPPPPPGGGRAPPPPPPPGGGGAPAPPPPPGGGRGAPAPPRPPGVGPPPPPPLGAKGANAPPDPRGLSSGRGRGLTRSTATAPRRSSLKPLHWSKVTRALQGSLWEELQRYGEPQIAPEFDVSELETLFSATVPKPADKSGGRRKSVGSKTDKVHLIDLRRANNTEIMLTKVKMPLPDMMAAVLAMDESVLDVDQVENLIKFCPTKEEMELLKGYTGDMDNLGKCEQYFLELMKVPRVESKMRVFSFKIQFGSQISEFKKSLNTVNSACDEVRNSTKLKEIMKKILYLGNTLNQGTARGSAVGFKLDSLLKLADTRASNNKMTLMHYLCKVLASKTPALLNFHLDLGSLEPATKIQLKSLAEEMQAIIKGLEKVRQELVASESDGPVSEVFRKTLKEFIAIAETEVTSVTNLYSTVGRNADALALYFGEDPARCPFEQVTVTLLNFVRLFRKAHEENCKQAELEKKKAEKEAEMENAKGISLTKKSVK 1724
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 32402265 32422779 + CrPI670011_06g024590.1 Cre06g2459 501921
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre06g2459 1724 Gene3D - 205 336 - -
Cre06g2459 1724 MobiDBLite consensus disorder prediction 522 536 - -
Cre06g2459 1724 MobiDBLite consensus disorder prediction 832 1325 - -
Cre06g2459 1724 MobiDBLite consensus disorder prediction 662 678 - -
Cre06g2459 1724 MobiDBLite consensus disorder prediction 635 814 - -
Cre06g2459 1724 MobiDBLite consensus disorder prediction 751 766 - -
Cre06g2459 1724 MobiDBLite consensus disorder prediction 687 722 - -
Cre06g2459 1724 MobiDBLite consensus disorder prediction 552 566 - -
Cre06g2459 1724 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 13 188 IPR029021 -
Cre06g2459 1724 CDD PTP_PTEN-like 16 190 - -
Cre06g2459 1724 Coils Coil 1687 1716 - -
Cre06g2459 1724 Coils Coil 1593 1613 - -
Cre06g2459 1724 Gene3D Protein tyrosine phosphatase superfamily 11 204 IPR029021 -
Cre06g2459 1724 MobiDBLite consensus disorder prediction 767 792 - -
Cre06g2459 1724 SMART PTEN_C2_2 198 338 IPR014020 -
Cre06g2459 1724 Pfam C2 domain of PTEN tumour-suppressor protein 199 336 IPR014020 -
Cre06g2459 1724 ProSiteProfiles C2 tensin-type domain profile. 200 339 IPR014020 -
Cre06g2459 1724 Pfam Formin Homology 2 Domain 1319 1686 IPR015425 -
Cre06g2459 1724 SUPERFAMILY Formin homology 2 domain (FH2 domain) 1388 1713 - -
Cre06g2459 1724 SMART it6_source 710 1722 IPR015425 -
Cre06g2459 1724 MobiDBLite consensus disorder prediction 490 521 - -
Cre06g2459 1724 ProSiteProfiles Formin homology-2 (FH2) domain profile. 1314 1712 IPR015425 -
Cre06g2459 1724 MobiDBLite consensus disorder prediction 490 580 - -
Cre06g2459 1724 FunFam Formin-like protein 1314 1698 - -
Cre06g2459 1724 Gene3D Formin, FH2 domain 1311 1698 IPR042201 -
Cre06g2459 1724 MobiDBLite consensus disorder prediction 1699 1714 - -
Cre06g2459 1724 MobiDBLite consensus disorder prediction 1699 1724 - -
Cre06g2459 1724 PANTHER FORMIN-J 1 764 IPR051144 -
Cre06g2459 1724 MobiDBLite consensus disorder prediction 836 1294 - -
Cre06g2459 1724 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 201 336 IPR035892 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre05g1800 Cre-Chr5:29989797 Cre06g2459 Cre-Chr6:32402265 4.90E-252 dispersed
Cre06g2459 Cre-Chr6:32402265 Cre07g0594 Cre-Chr7:3745089 4.50E-199 dispersed
Cre05g1650 Cre-Chr5:27306911 Cre06g2459 Cre-Chr6:32402265 3.30E-25 transposed
Cre05g2663 Cre-Chr5:37607051 Cre06g2459 Cre-Chr6:32402265 3.20E-25 transposed
Cre01g1538 Cre-Chr1:28597524 Cre06g2459 Cre-Chr6:32402265 0.00E+00 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre06g2459 K28090 - csv:101215105 1310.05