Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre06g2461 ATGGGAGGAGAATTTTCTAGGGCTCCAAACCCTCGAATTCCTTTCTCCTCCCTTCTCCTCCTCCTCCTCTCTCTCTGCCTCTCCGCCGCTCTCTCCGCCGCCCAAACCCCCTCATTCCGTTCCTTCTCCCCTCGCGACGCTTATTTGATCAACTGCGGCTCCCCGGCCCAAACCCGTCTCGACGACGGCCGGATTTTCAAATCCGATCGCGAATCCACTTCTCTCCTTTCCACCGAAGAAGACGTTCAGATTTCCGTCGATTCCATTCCCTCAAACGCCGCTGTTTCGCCTCTCTCTTCTTGGTCATTACCTCTATTTTGCTCCGCTAGAATTTTCCCCGACGATTCCACCTACACTTTCTTCATTTCTCAGCTCGGCCGCCATTGGATCCGCCTCTACTTTTACCCTCTTCCTCACCCTAATTACAATCTCTCCGATTCCGTTTTCACCGTCACCACCGATACCTTCGTCCTCCTCCATGATTTCTCAATCAAACCGAATCCAAAAATCGTCTTCAAGGAATACCTAATCAACATTACCACCGATCGATTCTCCCTCCAGTTCAAACCTAAGAAGAATTCCTTCGCCTTCGTCAATGCCATTGAAATCGTCTCCGCTCCAGATTCTCTTTTTTCCGATTCCGCCAACTCTGTTTCTCCGGTGGGATTTTTCAACGGATTGTCGAACATTGCTCTGCAAATTTGCTACCGTGTTAATGTGGGTGGCCCTGAACTTGTTCCTAAAAACGATACGCTGTCAAGAACATGGGAAACGGATTATGCTTACAACAAATTTCCACAGGGTTCTAAAAATGTTTCTGTCGCTTTGAACTCCATTAGATACCCTGGAGATGAAGTGACTCCATTAATTGCTCCTAATTGGGTTTATGCAACTGCAGAGGATCTCCAAGATCCTGAAACGATTCAAGTAAATTTCAATATGAGTTGGAGTTTCAATGTGGAACCGAGTTACTCGTATTTGATCAGACTCCATTTCTGTGACATTGTGAGCAAAGTCCTCAACAGTTTGTACTTCAATGTCTACATCAATGGGATGATGGGTATTGCAGATCTTGATCTTTCTCAACTCACTGGTGATCTTTCCACTCCATACTATAGAGACCTTGTTCTCAATGCCTCTGACATCAAGAACAACACCATCATGATTCAGGTTGGTCCATCAAATTTGGATTCAGGGCTTCAAGATGCGATTCTGAATGGAGTGGAAATCATGAAGATGAGTAACGATGCACAAAGCTTGGATGGTTTGTTTTCAGTGGATGGGACATACATGGGAGGCTCAAGATTTAGCACAATGAAGGTTGTAGCTGCTGTAGCACTTGGAATGGCAGCCATTGCCATTGTATTTGTTGGAGTAATGTTCTTGAGATGGCAAAGAAGGCCTCAGGGATGGGAGAAGAGAAACAGTTTCTCTTCATGGCTTCTTCCTTTGAATTCAACTCACACTGCCAGTTTCTTCTCTTCAAAAAGCAGCTCCAGAAGATCATCAACCGTTTTTAGCTCTCGAAGGAGCAGGACTGGCCTCTCAGCCATTTACTCCAATGTCGGTCTTGGCCGTTTCTTCTCCCTCAACGAGTTACAGGCTGCTACCCAGAACTTCGAGGAGAAAGCAGTGATCGGCGTTGGTGGATTCGGCAAAGTCTACGTCGGAGCATTAGAAGATGGAACCAAAGTCGCGATTAAACGTGGGAACCCTAGTTCTGATCAAGGCATTAACGAGTTCAGAACTGAGATCGAAATGCTGTCTAAACTCCGCCATCGCCATCTCGTTTCTCTAATCGGTTACTGCGACGAGCAATCCGAGATGATTCTGGTTTACGAGTACATGGCCAATGGCCCATTTCGCGACCACTTGTATGGCTCTAATCTCCCTCCTTTGTCTTGGAAACAGAGGCTCGAAATCTGTATCGGCGCTGCCCGTGGCCTTCACTATCTCCACACTGGTGCGGCTCAGGGCATAATCCACCGTGATGTCAAGACCACTAACATTCTTCTTGATGAAAATTTTGTTGCCAAAGTTGCTGATTTTGGGCTTTCCAAAGCTGCGCCATCTTTGGAACAGACCCATGTGAGCACTGCAGTCAAGGGAAGTTTTGGTTACCTTGATCCTGAGTACTTCAGAAGACAGCAACTCACTGAGAAATCTGATGTTTACTCATTTGGGGTTGTTCTTTTTGAGGTTCTATGTGCAAGACAAGTCATCAATCCCACATTGCCGCGTGAGCAGGTAAATTTGGCGGAGTGGGCAATGCAAAATTACAGAAAAGGAAAGCTAGAGAAGATAATTGATCCTCAAATTAGCAGCTCAATTGTAGAGGGGTCACTGAAGAAATTTGTGGAAGCAGCAGAGAAATGCTTGGCTGAATATGGGGTTGATAGACCAAGCATGGGAGATGTGCTATGGAACTTAGAATACGCTTTGCAGCTACAAGAGGCTGTATCAGAGCTCGAGGACCCTGAGGAAGACAAATGCGAAGGCCTTGTGGCTTTGGACAAACCAAATGACAATGAACCAAAAGGAGGTACAAGTGCTTCTGTAAGTGATGATATTTCTGAAGTTTCAGTTAGTGCTCCTTTGTTTTCAGAAGTTCAAAATTTTCAGGGAAGATAA 2631 45.84 MGGEFSRAPNPRIPFSSLLLLLLSLCLSAALSAAQTPSFRSFSPRDAYLINCGSPAQTRLDDGRIFKSDRESTSLLSTEEDVQISVDSIPSNAAVSPLSSWSLPLFCSARIFPDDSTYTFFISQLGRHWIRLYFYPLPHPNYNLSDSVFTVTTDTFVLLHDFSIKPNPKIVFKEYLINITTDRFSLQFKPKKNSFAFVNAIEIVSAPDSLFSDSANSVSPVGFFNGLSNIALQICYRVNVGGPELVPKNDTLSRTWETDYAYNKFPQGSKNVSVALNSIRYPGDEVTPLIAPNWVYATAEDLQDPETIQVNFNMSWSFNVEPSYSYLIRLHFCDIVSKVLNSLYFNVYINGMMGIADLDLSQLTGDLSTPYYRDLVLNASDIKNNTIMIQVGPSNLDSGLQDAILNGVEIMKMSNDAQSLDGLFSVDGTYMGGSRFSTMKVVAAVALGMAAIAIVFVGVMFLRWQRRPQGWEKRNSFSSWLLPLNSTHTASFFSSKSSSRRSSTVFSSRRSRTGLSAIYSNVGLGRFFSLNELQAATQNFEEKAVIGVGGFGKVYVGALEDGTKVAIKRGNPSSDQGINEFRTEIEMLSKLRHRHLVSLIGYCDEQSEMILVYEYMANGPFRDHLYGSNLPPLSWKQRLEICIGAARGLHYLHTGAAQGIIHRDVKTTNILLDENFVAKVADFGLSKAAPSLEQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEVLCARQVINPTLPREQVNLAEWAMQNYRKGKLEKIIDPQISSSIVEGSLKKFVEAAEKCLAEYGVDRPSMGDVLWNLEYALQLQEAVSELEDPEEDKCEGLVALDKPNDNEPKGGTSASVSDDISEVSVSAPLFSEVQNFQGR 876
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 32434171 32440202 - CrPI670011_06g024610.1 Cre06g2461 501923
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre06g2461 876 Gene3D Transferase(Phosphotransferase) domain 1 616 833 - -
Cre06g2461 876 SMART serkin_6 540 813 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cre06g2461 876 Pfam Protein tyrosine and serine/threonine kinase 543 802 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cre06g2461 876 ProSiteProfiles Protein kinase domain profile. 540 813 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cre06g2461 876 MobiDBLite consensus disorder prediction 836 857 - -
Cre06g2461 876 FunFam Putative receptor-like protein kinase 47 207 - -
Cre06g2461 876 ProSitePatterns Serine/Threonine protein kinases active-site signature. 660 672 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cre06g2461 876 FunFam Receptor-like protein kinase FERONIA 231 415 - -
Cre06g2461 876 FunFam Receptor-like protein kinase FERONIA 616 830 - -
Cre06g2461 876 CDD STKc_IRAK 546 811 - -
Cre06g2461 876 Gene3D Phosphorylase Kinase; domain 1 502 615 - -
Cre06g2461 876 ProSitePatterns Protein kinases ATP-binding region signature. 546 568 IPR017441 GO:0005524(InterPro)
Cre06g2461 876 Pfam Malectin-like domain 50 412 IPR024788 -
Cre06g2461 876 SUPERFAMILY Protein kinase-like (PK-like) 514 811 IPR011009 -
Cre06g2461 876 PANTHER OS07G0166700 PROTEIN 528 818 IPR045272 GO:0004672(PANTHER)|GO:0004714(InterPro)|GO:0005886(PANTHER)|GO:0006468(InterPro)|GO:0009506(PANTHER)|GO:0046777(PANTHER)
Cre06g2461 876 Gene3D - 230 416 - -
Cre06g2461 876 Gene3D - 46 207 - -
Cre06g2461 876 FunFam receptor-like protein kinase FERONIA 502 615 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre02g2358 Cre-Chr2:37016091 Cre06g2461 Cre-Chr6:32434171 2.60E-216 dispersed
Cre04g2124 Cre-Chr4:38490545 Cre06g2461 Cre-Chr6:32434171 8.20E-178 dispersed
Cre06g2020 Cre-Chr6:27846546 Cre06g2461 Cre-Chr6:32434171 5.90E-60 dispersed
Cre06g2461 Cre-Chr6:32434171 Cre09g0221 Cre-Chr9:2312487 8.60E-255 dispersed
Cre05g2570 Cre-Chr5:36921576 Cre06g2461 Cre-Chr6:32434171 6.50E-28 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
64240 PF12819 Malectin_like 2.20E-35 CL0202 Cre PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre06g2461 - - - 0.0