Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre06g2487 ATGGACGCCACTTGGAGGCCGAAGTGTGAAGTAATGGCCTTTGAAGATTCTTTTCCTTTATCTTGTCAACTTTCTCCTCTCCCTTTTAGATCAAGCTACAACAATTATTCTGGATTGGATTGGAATTGCAACTTTGGGTTGCAAGATAACATTTTTGAAGTTGTTCCTTTGTTGGAGAGTTTCCCAAATAATGACTCGTTTTTGGAATCAAAGGATATAGTGCCTATTAACACCTTTATATCAGAAGATGGGGTTGGGATTTGGAGTGAAATGGAAAATGGGATATTTGGCTTTGTTGAGGAAGAACCTGTTTTATTGCTAGAAGGAGAAGATGGTGGAGGAAATGAAGAAAATAGAGAAGTGATGAAGAAGGGGAAAAGAAAGTATTTGAGATCAGAAAATAGCAAAAACAATGGGAGTTATTCAACATCATCATCATCTTCAAAAATGTTGTCAAGAAAAGCAATATCTGAGTATTTCTACATGCCCATAACTCAGGCTGCTAAAGAGCTTAATGTGGGACTCACTCTTTTGAAGAAGAGATGTAGAGAATTGGGAATAAGAAGATGGCCTCATAGGAAGTTGATGAGCCTACAAACCCTAATCAAGAATGTCAAGGAGATTCAAAAGGGAGAAGGAGAGGGAAATGGAGAGAATAAGTTGAAGAATGTATTGGAAATATTAGAGAATGAGAAGAAGTTAATGGAGGAAAGGCCAGATTTGCAATTAAAGGACAACACAAAGAGGCTTAGACAAGCTTGTTTCAAGGCCAACTACAAGAAAAGAAAGCTCTCAGGAATCATCTTCAATAATAACAATAATATAATTAATGAAGATAATTCCCAGTATTTCTCATCCTCCACCACCATTCATGATCAGGATGAAGAAGATGATGAAGAAATGAAATATCTCTTGTCAGATTGCTCATTTTCCTCAACTAACTGCACCCTGTTCATTCTGAAGAACATTCACCATACAACAAATCCGGCGGTTTTGAAGAACACCAACGACGGCCAAATTGGCGGTGGAGCCCCATAG 1038 37.96 MDATWRPKCEVMAFEDSFPLSCQLSPLPFRSSYNNYSGLDWNCNFGLQDNIFEVVPLLESFPNNDSFLESKDIVPINTFISEDGVGIWSEMENGIFGFVEEEPVLLLEGEDGGGNEENREVMKKGKRKYLRSENSKNNGSYSTSSSSSKMLSRKAISEYFYMPITQAAKELNVGLTLLKKRCRELGIRRWPHRKLMSLQTLIKNVKEIQKGEGEGNGENKLKNVLEILENEKKLMEERPDLQLKDNTKRLRQACFKANYKKRKLSGIIFNNNNNIINEDNSQYFSSSTTIHDQDEEDDEEMKYLLSDCSFSSTNCTLFILKNIHHTTNPAVLKNTNDGQIGGGAP 345
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 32600403 32604018 - CrPI670011_06g024870.1 Cre06g2487 501949
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre06g2487 345 MobiDBLite consensus disorder prediction 109 147 - -
Cre06g2487 345 Coils Coil 218 238 - -
Cre06g2487 345 Pfam RWP-RK domain 151 198 IPR003035 -
Cre06g2487 345 ProSiteProfiles RWP-RK domain profile. 134 219 IPR003035 -
Cre06g2487 345 PANTHER PROTEIN RKD4 133 278 IPR044607 GO:0003700(InterPro)
Cre06g2487 345 MobiDBLite consensus disorder prediction 112 133 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre04g1714 Cre-Chr4:35297006 Cre06g2487 Cre-Chr6:32600403 4.30E-15 dispersed
Cre05g1087 Cre-Chr5:10207638 Cre06g2487 Cre-Chr6:32600403 1.10E-28 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
53942 PF02042 RWP-RK 6.50E-21 No_clan Cre TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre06g2487 - - - 0.0