Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre06g2513 ATGGCGCGCAAGAAGAGAAACACTGATCCGCGTGCTAAACAATCTCCGGCGGGTCCAAGTGTGTCGAACGCGGCGGAAAAGAGTTCAGTATCTGACAGGGCAAGTAATCAGAACCAAAGTAGGATTGAGCCAGTGGTTATCGATGAATCCGATGGCTTGCCTTCTTCTACAATTAAACTCGAATGCGAGAAGGCTCTTACTGCAATTCGGCGTGGGAACCACACTAAGGCACTTAGGCTTATGAAGGAGTTGAGTTCGAGAAATGAGAACTCTGTTCACTCTGCATTGATTCATCGGGTTCAGGGTACTATTTTTGTAAAAGTAGCGTCGATTATTGATGACCTGAATACAAAGCAGCGACATTTGAAGAATGCGATTGAGTCTGCTCGCAAAGCAGTCCAGCTCTCCCCAAACTCGATTGAGTTTTCTCATTTCTATGCAAATTTGCTATACGAGGCTGCAAATGATGCCAAGGAGTACGAGGAGGTGGTGCAAGAATGTGAGCGGGCCCTTGGAATTGAAAACCCAATTGATCCCGCAAAAGAAAGCTTGCAAGATGAAAAGAGTCAGAAAATACCTACTGCCGAAGCAAGAATTACACATGTTCAGACTGAATTGAGGCAGTTGATTCAAAAATCAAATATATATTCCCTATCATCTTGGATGAAGAACTTGGGTAACGGGGAGGAGAAGTTTAGGTCAATTACGATTAGAAGAGTGGCAGAGGACCCGATGGAGGTGAGGATGGTTCAAGCTAGAAGGGCAAACGAAATCAAGAAAGCAACCAAAACGCCTGAGGAGCGAAGGAAGGAGATCGAAGTTCGTGTTGCTGCTGCAAGGCTGGTGCAACAGAAGTCTGAGACGCCTCAAATGCAGAATGAAGGAGGTAAAGCTGATCGAACCCCGGAATCATCTTCAGGGCCTAGTACAAGAGTTGGTGAGCGGCGGAAACATGGCAATGTGCGGAAACTTGGCTCTTCAGCTGAGAGAAAGAATTGGGTTTGTTCTTTTTGGAGTTCCATGAGTACAGAATCAAAGAAAGATTTGCTCAAGATCAAAATTAGTGATCTTGAGACTTATTTTAGTTCCTTAAAGGATGCCTCGGCAAATGAAGTTATTTTAGAAGCTTTGTCCTTTTATGACGCCAATAAAACATGGAAATTCTGGGTTTGCTGCAAATGTGATAAGAAATCTGTGGATTCGGAATCCCATATGCACCACGTGGTTCAGGAACACCTGGGAAACCTTTTGCCGAAAATGCAATCTATCTTGCCACATAATGTTGATAATGATTGGAGTGAAATGCTTCTTAATTGCTCTTGGAAACCATTGGATGTTTCAGCTACAGCTAGAATGCTCACAGATCAAACAAAATGCAAAGATTCTGAGTTGGCTGAAGATATCTGCCCACAACATCATTCAGAATGTGATGAGTGTTTCAAAGATGCATGGGATTCTTCTCCAGAGAAGCATGATTATGGGAATAGTTTAAATGAATTCAATCTTTATGAGAAAATTAGCAACAGCGGATTTCCAGTACTTGATAGTTTTCCAGTATCTGACGACTCTGAGCGTACAAAGCTTCTTGAGAAAATTCATGCGGTATTTGAGTTACTTATTAAACATAAATATCTTGCTGCAAGCCATCTAAACAAGGTTATACAGTTTACAATGGATGAGTTACAGGGTCTTGTTTCTAGATCTCATCTTCTAAAGCAGGGTCTGGACCAAACACCACTATGTATTTGCTTTCTAGGCGCTTCTCAGCTTAGGAAAATCCTCAAGTTTTTGCAAGAATTATCTCACTCTTGTGGTGTAGGTAGATATTCTGATAGAAGTACTGATCAAATTGAAGATCCAAAGAGTGACAAACAAGTTGCTGATGTAGAAGAGAAAATTGTTCTCAATGGAGATGGGTCACTTCTCCTTCTCAATGAGTGTTTGCTGTCATCTGATATCCCTCATGCCAGTGGTCAGGTTGCAGCCTCAGATCAGATGCCTTCTGCAATTGGCAAGGATGCTGCAAATGAGGTTCTGTCTGATGGTGATCCTTTCCTGTCCTGGGTATATGCAGGTCCCTCTAGTGGGGAACAATTAGCATCATGGGCACAAAGAAAGGAAGAAAAGACACAACGACGAATGGAAATTTTTCAAACACTTGAGAAAGAATTTTACACTCTGCAGAACCTTTGTGAGAGAAAATGTGAGCATTTGAACTATGAGGAAGCATTGCAATCGGTGGAGGATCTCTGCCTTGAAGTGGGCAAGAAGAGGGAAGCTATGACTGAATTTATCCCCAAAAGTTATGAGTCAATCCTGCGGAAACGAAGAGAGGAGCTTATTGAGGCTGAAAATGATGCAATGTATATTGGCAGTAGGTTTGAGTTAGATGCTGTTACTAATATTTTGAAAGAAGCCGAAGCACTGAATGTTAATCAACTTAGATTTGAGGAAACTTCTGGCAGTGTGTCTTCTCAGCTATATGATTTGGAATCTGGTGAAGATGAAGATTGGAGGGCTAAGGATTATTTGCATCAAGTTGATACTTGCATAGAAGTTGCAATAAAGAGACAGAAGGAACAGCTATCTGTCGAGATTAGCAAAATTGATGCACGCATCATGCGAATTGTTACTGGAATGCAAGAGTTGGAACTTAAGCTCGAGCCTGTTTCGGCACATGATTACCAATCAATATTGTTGCCTCTTGTGAACTCATACTTGAGGGCACATTTAGAAGATTTGGCTGAAAAAGATGTCACAAAGAAGTCTGATGCTGCCAGAGAAGCATTTTTAGCTGAACTGGCACTGGATTCAAAAAAGGGTATCAAAGGTGGAAGTGATAATTCAAAACATGCACATGAAAAGCCGAAGGAAAAGAAAAAAAGCAAGGAGTTTAGGAAAGCCAAGGACTCTAAGGTGGTCAATGCTCCTGAGCAGGATGTGCTTCATGATGAGGCTGTTGATGGAGATCCCTGTCAAATTCCATCTGATGGTGATGCGGCGGAGGTGGACATTCCTGTTATTGAAAACTCTGACGCTTTAAGACTACAGGAGGAAGAGATAAGACGCAAAATTGAGCTGGAAGCAGATGAAAGAAAGCTAGAAGAGACTTTGGAGTATCAAAGACGAATTGAGAATGAGGCTAAACAAAAGCATCTGGCTGAATTACAAAAGAAATCTTCACAGACAAATCTAGAGGATAAAGCTGCTCTGGCAGTACATGATAATCTCATTGGACCTGCCCCCAGTGTTGAGGGTGTTGATGAGCATTTTAAGCCCTCTGTGATGGATCAATTGGCAGAAAGTGAATTGGTTCCTGACTGGTCAACACCGAAGGCTTCTTCAGCAGGTGCATCCAATGTAGCAATTCTAGAGACTAGTCTACCGTCTTCTGATAGGAGGAGGGGGAGGAAAGGTAGACGGCACAAGGCATCAATCAAACAAGTAGATGGAAATCAGCCTTCACAATCTGAGAAGGATAATGTATCCTTTGACAACCAATTGAATGAGCAAGTTAGACATCATGACAATCTCCTAGTAGATAGTGTTAAACCACTTTCTGAAGATTATAGTACAAAGACTTTGAGACAACAACATGCAGCGGATGATGAGGAAAGATTTCAAGCTGACCTTAAGAAGGCTGTACGGCAGAGCCTTGATGCATTTCAAGAAAAGCAGAAATTGCCCTTGGTTACAAGTTCTAGGACACCGTTGATCAGTCGTGGCGAAGTAGATAGTAATGATCCTCCATCAAATGAACTCAATGTAGACAATATCTGTGGTACAGGACTTAAGAATGAAGTTGGTGAATATAATTGCTTTCTGAATGTGATTATTCAGTCCTTGTGGCATTTAAGACGGTTTCGAGAAGAGTTTCTGAGAAGATCTATGACTGAGCATGTTCATGTTGGGGATCCCTGTGTTGTTTGTGCATTATATGAAATCTTCACTGCCTTGAGCATGGCTTCTGCAGATGCTAGAAGAGAAGCAGTTGCTCCCACTTCTCTAAGAATAGCTCTGAGCAATCTTTGTCCTGATAGTAATTTTTTCCAAGAGGGCCAGATGAATGACGCCTCTGAAGTGCTGGCTGTCATATTTGATTGCCTACACCAGTCATTGACTTCTAGTTCGAGCATTTCTGATACAGAATCAGTAGAAAGCAATTGCATGGGGTCGTGGGACTGTGCAAGTGACAGTTGTTTGGTACATTCCATCTTTGGCATGGACATTTTTGAACGAATGAATTGCTATAGTTGTGGCCTGGAATCTAGACATCTGAAGTACACTTCCTTCTTTCACAATATAAATGCCAGTGCCCTTCGAACAATGAAGGTTATGTGTACAGAAAGCTCCTTCGATGAACTTCTAAATGTTGTGGAAATGAATCATCAGCTAGCTTGTGATTTGGATGTCGGTGGTTGTGGAAAGCTCAATTACATTCATCACTTTCTCTCTGCACCACCACATGTGTTCACAACAGTCTTGGGCTGGCAGAACACTTGTGAGAATGCTGATGACATATCCGCAACATTAGCTGCTCTGAATACCGAGATAGATATCAGTGTTCTTTATCGGGGTCTAGATCCAAAGAATACACATAATTTGGTATCAGTGGTTTGCTATTATGGTCAGCACTATCATTGTTTTGCTTACAGTCACGACAAGAAATGCTGGATAAAGTATGATGATAGAACTGTCAAGGTAATTGGCGACTGGCCTGATGTTCTTACCATGTGCGAAAAAGGACATTTGCAACCTCAGATTTCAGTGAATCAATATGAATCAGTCTTCAAATTCCCTATTCTGCATTTGGTGCCTATCTGGATTTATTCAAAATCTTATATCTTCTCTGTTTACTGA 4860 41.71 MARKKRNTDPRAKQSPAGPSVSNAAEKSSVSDRASNQNQSRIEPVVIDESDGLPSSTIKLECEKALTAIRRGNHTKALRLMKELSSRNENSVHSALIHRVQGTIFVKVASIIDDLNTKQRHLKNAIESARKAVQLSPNSIEFSHFYANLLYEAANDAKEYEEVVQECERALGIENPIDPAKESLQDEKSQKIPTAEARITHVQTELRQLIQKSNIYSLSSWMKNLGNGEEKFRSITIRRVAEDPMEVRMVQARRANEIKKATKTPEERRKEIEVRVAAARLVQQKSETPQMQNEGGKADRTPESSSGPSTRVGERRKHGNVRKLGSSAERKNWVCSFWSSMSTESKKDLLKIKISDLETYFSSLKDASANEVILEALSFYDANKTWKFWVCCKCDKKSVDSESHMHHVVQEHLGNLLPKMQSILPHNVDNDWSEMLLNCSWKPLDVSATARMLTDQTKCKDSELAEDICPQHHSECDECFKDAWDSSPEKHDYGNSLNEFNLYEKISNSGFPVLDSFPVSDDSERTKLLEKIHAVFELLIKHKYLAASHLNKVIQFTMDELQGLVSRSHLLKQGLDQTPLCICFLGASQLRKILKFLQELSHSCGVGRYSDRSTDQIEDPKSDKQVADVEEKIVLNGDGSLLLLNECLLSSDIPHASGQVAASDQMPSAIGKDAANEVLSDGDPFLSWVYAGPSSGEQLASWAQRKEEKTQRRMEIFQTLEKEFYTLQNLCERKCEHLNYEEALQSVEDLCLEVGKKREAMTEFIPKSYESILRKRREELIEAENDAMYIGSRFELDAVTNILKEAEALNVNQLRFEETSGSVSSQLYDLESGEDEDWRAKDYLHQVDTCIEVAIKRQKEQLSVEISKIDARIMRIVTGMQELELKLEPVSAHDYQSILLPLVNSYLRAHLEDLAEKDVTKKSDAAREAFLAELALDSKKGIKGGSDNSKHAHEKPKEKKKSKEFRKAKDSKVVNAPEQDVLHDEAVDGDPCQIPSDGDAAEVDIPVIENSDALRLQEEEIRRKIELEADERKLEETLEYQRRIENEAKQKHLAELQKKSSQTNLEDKAALAVHDNLIGPAPSVEGVDEHFKPSVMDQLAESELVPDWSTPKASSAGASNVAILETSLPSSDRRRGRKGRRHKASIKQVDGNQPSQSEKDNVSFDNQLNEQVRHHDNLLVDSVKPLSEDYSTKTLRQQHAADDEERFQADLKKAVRQSLDAFQEKQKLPLVTSSRTPLISRGEVDSNDPPSNELNVDNICGTGLKNEVGEYNCFLNVIIQSLWHLRRFREEFLRRSMTEHVHVGDPCVVCALYEIFTALSMASADARREAVAPTSLRIALSNLCPDSNFFQEGQMNDASEVLAVIFDCLHQSLTSSSSISDTESVESNCMGSWDCASDSCLVHSIFGMDIFERMNCYSCGLESRHLKYTSFFHNINASALRTMKVMCTESSFDELLNVVEMNHQLACDLDVGGCGKLNYIHHFLSAPPHVFTTVLGWQNTCENADDISATLAALNTEIDISVLYRGLDPKNTHNLVSVVCYYGQHYHCFAYSHDKKCWIKYDDRTVKVIGDWPDVLTMCEKGHLQPQISVNQYESVFKFPILHLVPIWIYSKSYIFSVY 1619
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 32820782 32829311 + CrPI670011_06g025130.1 Cre06g2513 501975
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre06g2513 1619 MobiDBLite consensus disorder prediction 1 48 - -
Cre06g2513 1619 Pfam Protein of unknown function (DUF629) 335 853 IPR006865 -
Cre06g2513 1619 SUPERFAMILY Cysteine proteinases 1262 1577 IPR038765 -
Cre06g2513 1619 PANTHER UBIQUITIN SPECIFIC PROTEINASE 1 1588 IPR052398 -
Cre06g2513 1619 MobiDBLite consensus disorder prediction 1108 1127 - -
Cre06g2513 1619 MobiDBLite consensus disorder prediction 1108 1161 - -
Cre06g2513 1619 Coils Coil 150 170 - -
Cre06g2513 1619 CDD Peptidase_C19 1354 1576 - -
Cre06g2513 1619 MobiDBLite consensus disorder prediction 13 44 - -
Cre06g2513 1619 Gene3D Tetratricopeptide repeat domain 55 197 IPR011990 GO:0005515(InterPro)
Cre06g2513 1619 Coils Coil 1017 1047 - -
Cre06g2513 1619 ProSiteProfiles Ubiquitin specific protease (USP) domain profile. 1262 1596 IPR028889 -
Cre06g2513 1619 MobiDBLite consensus disorder prediction 941 974 - -
Cre06g2513 1619 MobiDBLite consensus disorder prediction 281 324 - -
Cre06g2513 1619 Pfam Protein of unknown function (DUF627) 65 174 IPR006866 -
Cre06g2513 1619 MobiDBLite consensus disorder prediction 310 324 - -
Cre06g2513 1619 MobiDBLite consensus disorder prediction 943 974 - -
Cre06g2513 1619 SUPERFAMILY TPR-like 58 175 IPR011990 GO:0005515(InterPro)
Cre06g2513 1619 MobiDBLite consensus disorder prediction 283 309 - -
Cre06g2513 1619 Gene3D Cysteine proteinases 1250 1594 - -
Cre06g2513 1619 Coils Coil 112 132 - -
Cre06g2513 1619 Pfam Ubiquitin carboxyl-terminal hydrolase 1263 1570 IPR001394 GO:0004843(InterPro)|GO:0016579(InterPro)
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre06g2513 - - - 0.0