Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre06g2517 ATGGAAGTTTTTGGGTTTATGCCCAACAAATGGATTGCAACCGCCCTTGGAATTTGGATTCAATGTATCTGCGGTGCTTCCTACACCTTCAGCATCTATTCTTCCGCTCTCAAGTCCTCCCAGGCCTACGATCAATCCACCCTCGACATCGTTTCCGTTTTCAAAGACATCGGCGCCAACGCCGGCATCATTTCTGGTTTTCTTTACTCCGCCGTCACTCCCCCAGCCCCCCGCTGGGCCTTTGCCGGGCCATGGGTGGTTCACGCCGCCGGAGCGATTCAGTGCTTCCTCGGATATATATTCATATGGGCCGCTATCTCTGGAGTGATCGATCGGCCGCCGGTGCCGGCGATGTGCTTCTTCATGTTTCTGGCTGCACATGCGCAAACGTTTTTCAATACGGCGAATGTGGTAACTGGCGTGCACAATTTTGCGCACTATAGCGGGACGATTGTGGGAATCATGAAGGGATATCTTGGTCTCAGTGGAGCACTGCTAATCCAAGTTTATAATACGACTTGCAATGGAGATCCAAGCAATTTTCTCCTCATGCTGGCGGTTTTGCCCACACTTCTTTCCATCATGTTCATGTGGTTTGTTAGAATTGACAAAACAAAGTCTAGTAATGAGATGAAGCATTTGAATTCATTGTCTGCACTTGCTGTGATAGTTGCTTTTTACCTAATGGTTGTCATCATCTTGAACAACACTTTCTCCCTTTCTTCATGGACTCGTTTCTTTACATTCTCCATACTCTTGATTCTCCTTGCTGCTCCTCTTGCAATCGCCATTAATGCTCAGAGGGAAGACTTTAGAGAGTCATCTCCATCATTCCTCACTGAAAAAAGTCATGTTGTTAACAAACTCAAGTCAATGGATGCAGAGGATTCTGTTGAATATCATGAATTGCCCAGGGATGAGAGCCAGACAGTGGCTGTTTCCAACTCTAGAATTCCTCAAGCCATGAATGTCTTGGAAGCTATACGCACTATAAACTTCTGGCTGTTGTTTCTTGCCATGGTGTGCGGAATGGGTTCTGGATTGGCCACAATAAACAACATGAGCCAACTTGGCCAGTCTCTTGGTTACACAGCAACAGAGACGAAGACATTTGTTTCGTTATGGAGTATATGGAACTTTCTTGGACGTTTTGGAACTGGTTACACCTCTGATTTTCTTCTCCACTCATATGGGTGGGCAAGGCCACTGTTAATGGCAATTACTCTAATGATAATGAGTGGCGGCCACATCGTGATCGCCTCCGGTTTCTCTGGAAATCTGTATGTGGGTTCAATTCTTGTTGGCATATGCTATGGCTCACAATGGTCATTGATGCCTACAATCACTTCAGAGATATTTGGTTTAGAGCATATGGGTACTATTTTCAACACCATAGCCATCGCCAGCCCTTTGGGGTCTTACATTTTTTCTGTTCGAGTTATCGGTTACATTTACGACAGAGAATCTGCTGGAGAACATGGCTCCTGCTCTGGTACACACTGTTTGTTGATATCTTTTCTTGTCATGGCCGTCGTGGCTTTCTTGGGATCCCTTGTTGCTGCTGCACTCTTCTTCCGAACCAGGAGATTTTACCGACTGGCGTTGCAAAGAAGAGTGGAATGTCTAAGTTAG 1632 45.96 MEVFGFMPNKWIATALGIWIQCICGASYTFSIYSSALKSSQAYDQSTLDIVSVFKDIGANAGIISGFLYSAVTPPAPRWAFAGPWVVHAAGAIQCFLGYIFIWAAISGVIDRPPVPAMCFFMFLAAHAQTFFNTANVVTGVHNFAHYSGTIVGIMKGYLGLSGALLIQVYNTTCNGDPSNFLLMLAVLPTLLSIMFMWFVRIDKTKSSNEMKHLNSLSALAVIVAFYLMVVIILNNTFSLSSWTRFFTFSILLILLAAPLAIAINAQREDFRESSPSFLTEKSHVVNKLKSMDAEDSVEYHELPRDESQTVAVSNSRIPQAMNVLEAIRTINFWLLFLAMVCGMGSGLATINNMSQLGQSLGYTATETKTFVSLWSIWNFLGRFGTGYTSDFLLHSYGWARPLLMAITLMIMSGGHIVIASGFSGNLYVGSILVGICYGSQWSLMPTITSEIFGLEHMGTIFNTIAIASPLGSYIFSVRVIGYIYDRESAGEHGSCSGTHCLLISFLVMAVVAFLGSLVAAALFFRTRRFYRLALQRRVECLS 543
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 32851765 32854582 + CrPI670011_06g025170.1 Cre06g2517 501979
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre06g2517 543 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 9 531 - GO:0016020(PANTHER)
Cre06g2517 543 Gene3D MFS general substrate transporter like domains 211 524 IPR036259 -
Cre06g2517 543 Pfam Nodulin-like 10 264 IPR010658 -
Cre06g2517 543 CDD MFS_Mch1p_like 10 516 - -
Cre06g2517 543 SUPERFAMILY MFS general substrate transporter 216 529 IPR036259 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre06g2517 Cre-Chr6:32851765 Cre06g2519 Cre-Chr6:32862977 9.60E-164 dispersed
Cre06g2517 Cre-Chr6:32851765 Cre06g2518 Cre-Chr6:32857726 4.60E-190 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre06g2517 - - - 0.0