Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre06g2518 ATGGAAGCTCCTCCGATTCCGAGCAACAGATGGATGGCTACCGTTGCCAGCATTTGGATCCAGTGCATCTGCGGTCCATCCTACACCTTCAGCATCTACTCCGCCGCCCTCAAATCCACTCAAAACTACGATCAATCCACTCTCGACACTGTTTCCGTCGTCAAAGACATCGGCGCCACCGCCGGGGTTCTCTCCGGCCTCCTCTACTCCGCCGTCGTTTCCACAGACCACCCCCGTCGCCCATGGATCGTCCTCACCGTCGGAGCTATTCAATGTTTCCTTGGATACATTTTCATGTGGGCCGCCGTCTCCGGCTTAATCCCTCGACCGCCGGTGCCGACAATGTGTCTGTTCATGTTCTTAGCCGTCCATGCCCAAGTTTTCTTCAACACGGCTAATGTTGTCACTGGCGTTCATAATTTCCAGCTCTACAGCGGCACCATTGTCGGCATTCTAAAGGGATTTTTGGGTCTTAGTGCAGCAGTACTGATCCAATTCTCCAACGCATTCTTCAACGGAGACCCTGTAAATTATCTTTTGATGCTGGCGATTTTGCCGGCGCTTACGACTCTGTTGCTCATGAGATTCGTCGTAATCGACAATAAAACAGAGACCGGAAATGAATTGACCCATTTGAATTCCCTCTCGACAATTGCTCTAACAATCTGCGGATATCTCACGATTCTAATCATTTTAGACAACGTTCTCAATCTACCGACATGGGTTCGCATCTTCACCTTCATTCTCCTCCTCGCCTTTCTTGTTTCCCCTGTCGGAATCGCAATCAGAGCAAAAACAGAAGACTCTGTTTTCAAAACGAAGCTTCAAATTACCGAGAATCCCGTTGAATATCATCGCATTCCCAGCGAGGAGAAGATCAATGATGAGCTGGTGATTGTTAAAGACGGAGAAATGAATATAATCGAGGCAATTGGCACAATGAATTTCTGGCTATTGTTTCTCGCGATGATGTGCGGAATGGGTTCTGGGTTAGCCACCATAAACAACATGAACCAACTGTGCCAGTCCTTGGGATACAGAACAGTCGAAATCAATACATTCGTTTCACTTTGGAGCATTTGGAATTTCCTTGGGCGTTTGGGATCTGGCTATGCCTCTGATCTTCTCCTCTGGAAATTAGGGTGGGCGAGGCCATTGTTAATGGCCATTGCCTTGCTAACAATGAGCATCGGCCATATCATCGTAGCTTTAGGATTTCGTGGGAATTTGTACTTGGGATCGGTGATTGTCGGGATTTGTTACGGGTCTCAATGGTCGTTAATGCCGGCAATTACGTCGGAGATATTTGGAGTAAAGCATATGGGTACGATTTACAATACCATTGCTGTGGCTAGTCCGATTGGATCTTATGTTTTGTCTGTTAGAGTTATTGGGTATATTTACGACAGAGAAGCCTCCGCCGGAGATAACTCTTGCTCCGGTGGACACTGTTTTATGACGTCTTTTCTGATCATGGCGGCGGTGGCTTTCTTGGGGTTTGTGGTTGTTGTTGCTCTGTTTTTCCGGACCAGAAGATTCTATCAACTTCTTGTACAGAGAAGGCTCAAAGATTAG 1575 47.3 MEAPPIPSNRWMATVASIWIQCICGPSYTFSIYSAALKSTQNYDQSTLDTVSVVKDIGATAGVLSGLLYSAVVSTDHPRRPWIVLTVGAIQCFLGYIFMWAAVSGLIPRPPVPTMCLFMFLAVHAQVFFNTANVVTGVHNFQLYSGTIVGILKGFLGLSAAVLIQFSNAFFNGDPVNYLLMLAILPALTTLLLMRFVVIDNKTETGNELTHLNSLSTIALTICGYLTILIILDNVLNLPTWVRIFTFILLLAFLVSPVGIAIRAKTEDSVFKTKLQITENPVEYHRIPSEEKINDELVIVKDGEMNIIEAIGTMNFWLLFLAMMCGMGSGLATINNMNQLCQSLGYRTVEINTFVSLWSIWNFLGRLGSGYASDLLLWKLGWARPLLMAIALLTMSIGHIIVALGFRGNLYLGSVIVGICYGSQWSLMPAITSEIFGVKHMGTIYNTIAVASPIGSYVLSVRVIGYIYDREASAGDNSCSGGHCFMTSFLIMAAVAFLGFVVVVALFFRTRRFYQLLVQRRLKD 524
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 32857726 32859383 + CrPI670011_06g025180.1 Cre06g2518 501980
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre06g2518 524 CDD MFS_Mch1p_like 10 499 - -
Cre06g2518 524 Pfam Nodulin-like 10 261 IPR010658 -
Cre06g2518 524 Gene3D MFS general substrate transporter like domains 308 515 IPR036259 -
Cre06g2518 524 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 9 514 - GO:0016020(PANTHER)
Cre06g2518 524 SUPERFAMILY MFS general substrate transporter 219 512 IPR036259 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre06g2518 Cre-Chr6:32857726 Cre10g2113 Cre-Chr10:35730619 4.10E-87 dispersed
Cre06g2517 Cre-Chr6:32851765 Cre06g2518 Cre-Chr6:32857726 4.60E-190 tandem
Cre06g2518 Cre-Chr6:32857726 Cre06g2519 Cre-Chr6:32862977 7.10E-148 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre06g2518 - - - 0.0