Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre06g2519 ATGGAATTGAAATCGGAGACTTCCAGCTTCAGCAACAAATGGGTATCAACAGTTGCTAGCGTATGGATTCAATGCACTAGCGGATCTCTTTACACTTTCTCCATATACTCCCAAACCCTCAAATCAACTCAGGGATACGATCAATCCACTTTGGATATTGTTTCTGTTTTCAAAGATATCGGTGTCAATTGTGGCGTCCTTGCGGGCTTTCTCTATTACTATGCCACCGCTGATGGTCGTCGTCCTGGGCCGTGGATTGTTCACTTGGCCGGTGCAATTCAGTGCTTCTTGGGGTATTTCTTTATCTGGGCTGCCGTTTCTGGGGTCTTTCCTCGGCCGCCGGTTCCCGTTATGTGCCTTTTCATGTTGGTGGCTGCTCATGCTCAGAGTTTCTTCAACACGGCTAACGTTGTCACTGGCGTTCGGAATTTCCCCAGTTATAGTGGGACGATTGTTGGAATCATGAAGGGGTTTCTTGGTTTGAGTGGAGCAATATTGATTCAAGTATACGAGACAATATTTAATGGGCAACCTACTTCGTTTCTTCTGATGTTGGCGCTGCTTCCAACCCTTAATTCCTTATTGTGTATGTGGTTCGTGAGAATCCACCATGCAGATAATGGGATTGAAAAAGAGCATCTGAATACCCTATCCATAATTACTCTGCTCGTTGCTACTTACCTTATGATCAAGATAGTTCTAGAGCATATTTTCACCTTCCAATTCCCTTTACATGTTGCTACATTTGTTCTACTTTTGATGTTGCTTGCATCTCCTCTATGTATTGCAATTAGAGCCCAACAGAGGGAGTCCAGAAGGATTTTGCACCCTTCTTTTACTGAGAGCGACCGGCTGATTGGTCGCTCCAATCAAGAGACTTCAGATTTTGACTATGAACGGAGAAGGGAATCTGAAGAAAGCCTGAACCTCTTTCAAGCTTTGTACACAATAGACTTCTGGATATTGTTTTTTGCGACTGCTTGTGGCATGGGAACAGGGTTAGCTACAGTGAATAATATCAGCCAGATAGGATTATCTCTCGGTTACACAAGCTTGGAGATAAATACTTTGGTTTCGTTGTGGAGTATTTGGAACTTTTTTGGTCGTTTTGGAGCTGGGTATGTGTCAGATTATTTTCTGCATGTCAAAGGATGGGCTAGGCCGTTGTTCATGTTCATCACTCTGACAACCATGGGCATTGGACATGTAGTGATTGCTTCTGGCCTGCCTGGTGCTCTTTTTGCTGGTTCGGTAGTAGTGGGTGTTTGTTATGGGTCTCAGTGGTCACTAATGCCAACAATTACTTCTGAAATATTTGGTGTTGTACACATGGGTACTATATTCAATGCCGTAACAGTAGCAAGCCCTGTTGGATCTTATTTATTTTCAGTTAGAGTTGTTGGGTATATATATGACAAGGAAGCATCAGAAGGCTGCAACACTCATGAAATGTGGAGGTTTTTCCTGGTTGCTGCTAGTAAGGTAGTTCAATTCTTTTGTGCGGAGTAG 1509 43.41 MELKSETSSFSNKWVSTVASVWIQCTSGSLYTFSIYSQTLKSTQGYDQSTLDIVSVFKDIGVNCGVLAGFLYYYATADGRRPGPWIVHLAGAIQCFLGYFFIWAAVSGVFPRPPVPVMCLFMLVAAHAQSFFNTANVVTGVRNFPSYSGTIVGIMKGFLGLSGAILIQVYETIFNGQPTSFLLMLALLPTLNSLLCMWFVRIHHADNGIEKEHLNTLSIITLLVATYLMIKIVLEHIFTFQFPLHVATFVLLLMLLASPLCIAIRAQQRESRRILHPSFTESDRLIGRSNQETSDFDYERRRESEESLNLFQALYTIDFWILFFATACGMGTGLATVNNISQIGLSLGYTSLEINTLVSLWSIWNFFGRFGAGYVSDYFLHVKGWARPLFMFITLTTMGIGHVVIASGLPGALFAGSVVVGVCYGSQWSLMPTITSEIFGVVHMGTIFNAVTVASPVGSYLFSVRVVGYIYDKEASEGCNTHEMWRFFLVAASKVVQFFCAE 502
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 32862977 32867299 + CrPI670011_06g025190.1 Cre06g2519 501981
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre06g2519 502 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 12 490 - GO:0016020(PANTHER)
Cre06g2519 502 Pfam Nodulin-like 13 264 IPR010658 -
Cre06g2519 502 ProSiteProfiles Major facilitator superfamily (MFS) profile. 317 502 IPR020846 GO:0022857(InterPro)
Cre06g2519 502 SUPERFAMILY MFS general substrate transporter 9 204 IPR036259 -
Cre06g2519 502 SUPERFAMILY MFS general substrate transporter 219 474 IPR036259 -
Cre06g2519 502 Pfam Major Facilitator Superfamily 324 472 IPR011701 GO:0022857(InterPro)|GO:0055085(InterPro)
Cre06g2519 502 CDD MFS_Mch1p_like 13 482 - -
Cre06g2519 502 Gene3D MFS general substrate transporter like domains 214 500 IPR036259 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre06g2517 Cre-Chr6:32851765 Cre06g2519 Cre-Chr6:32862977 9.60E-164 dispersed
Cre06g2519 Cre-Chr6:32862977 Cre10g2113 Cre-Chr10:35730619 1.40E-84 dispersed
Cre06g2518 Cre-Chr6:32857726 Cre06g2519 Cre-Chr6:32862977 7.10E-148 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre06g2519 - - - 0.0