Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre06g2537 ATGGCGATTCCCATTCCCAGCCGACAGCTGTTCATCGACGGCGAGTGGAGGGAACCAGTCCTCAAGAACCGCATCCCCATCATCAACCCCACTACTGAAGAAACAATCGGATCTATTCCCGCGGCTACTGCGGAAGATGTACAGTTAGCAGTTGATGCTGCTCGAAAAGCACTTGCGAGGAATAAAGGCAAAGATTGGGCCTCTGCTCCGGGGGCTCATCGTGCCAAGTATTTGCGTGCTATTGCTGCTAAGATAACAGAGAGGAAATCAGAATTAGCAAAACTTGAAGCAATAGACTGTGGAAAACCTCTGGAAGAAGCTGCATGGGACATGGATGATGTTGCTGGGTGCTTCGAGTACTATGCAGATCTTGCCGAAGGGTTGGATGCAAAGCAAAAAGCTCCTGTTTCTCTTCCCATGGATACATTCAAGAGCTATGTTCTTAAAGAACCCATTGGAGTTGTTGGGTTGATTACTCCCTGGAACTATCCTCTATTGATGTCTACATGGAAAGTTGCACCTGCCTTGGCTGCTGGGTGTGCTGCAATCCTGAAGCCATCAGAACTGGCATCTGTCACCTCTTTGGAATTGGGCGAAATCTGTAAAGATGTTGGTCTTCCATCTGGTATTTTGAATATTCTGACAGGATTTGGCCCCGAAGCTGGTGCTCCTCTAGCATCTCATCCTCACGTTGACAAGATTGCATTTACTGGGAGTGGTGCTACTGGAAGCAAGATTATGACAGCAGCTGCTCAACTTGTCAAGCCTGTTACCATGGAACTTGGTGGAAAAAGTCCAATTGTTGTTTTTGATGATGTCGACCTTGACAAGGCTGCCGAATGGACAGCATTTGGTTGCTTTTGGACAAATGGTCAGATTTGCAGTGCCACATCCCGTCTACTTGTACATGAAAACATTGCTGATGAATTCTTGGATAGGCTCGTGAAATGGTGCCAGAACATTAAGATTTCAGATCCTTTAGAAGAAGGTTGCAGGCTTGGCCCTGTTGTTAGTGCAGGACAGTATGAGAAAATATTGAAGTTTGTCTCAACTGCTGAGCACGAAGGTGCAAAGATTCTATATGGTGGAGTTCGCCCTAAGCACCTAAAGAAGGGATACTTCGTTGAACCAGCCATTATTACTAATGTTACAACCTCCATGCAAATATGGAAAGAAGAAGTCTTTGGACCTGTTCTGTGTGTGAAGACTTTTAGTTCTGAAGATGAAGCTATCGAATTAGCAAATGATACAATATATGGGCTAGGTGCTGCTGTAATATCAAATGATTTAGAAAGGTGTGATCGCGTAGCCAAGGCTTTACAGGCAGGAATTGTGTGGGTTAATTGCTCGCAACCATGCTTCACTCAAGCCCCATGGGGAGGCAACAAACGCAGTGGCTTTGGTCGAGAGCTAGGGGAATGGGGACTTGATAATTATCTAACCGTAAAGCAGGTTACTCAATATATATCCGACGAACCATGGGGATGGTACAAATCTCCTTCTAAACTGTAA 1512 45.44 MAIPIPSRQLFIDGEWREPVLKNRIPIINPTTEETIGSIPAATAEDVQLAVDAARKALARNKGKDWASAPGAHRAKYLRAIAAKITERKSELAKLEAIDCGKPLEEAAWDMDDVAGCFEYYADLAEGLDAKQKAPVSLPMDTFKSYVLKEPIGVVGLITPWNYPLLMSTWKVAPALAAGCAAILKPSELASVTSLELGEICKDVGLPSGILNILTGFGPEAGAPLASHPHVDKIAFTGSGATGSKIMTAAAQLVKPVTMELGGKSPIVVFDDVDLDKAAEWTAFGCFWTNGQICSATSRLLVHENIADEFLDRLVKWCQNIKISDPLEEGCRLGPVVSAGQYEKILKFVSTAEHEGAKILYGGVRPKHLKKGYFVEPAIITNVTTSMQIWKEEVFGPVLCVKTFSSEDEAIELANDTIYGLGAAVISNDLERCDRVAKALQAGIVWVNCSQPCFTQAPWGGNKRSGFGRELGEWGLDNYLTVKQVTQYISDEPWGWYKSPSKL 503
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 33005941 33010693 - CrPI670011_06g025370.1 Cre06g2537 501999
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre06g2537 503 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 24 483 IPR016162 GO:0016491(InterPro)
Cre06g2537 503 Pfam Aldehyde dehydrogenase family 20 485 IPR015590 GO:0016491(InterPro)
Cre06g2537 503 SUPERFAMILY ALDH-like 5 489 IPR016161 GO:0016491(InterPro)
Cre06g2537 503 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 287 298 IPR016160 GO:0016491(InterPro)
Cre06g2537 503 CDD ALDH_F10_BADH 27 487 - -
Cre06g2537 503 FunFam Betaine aldehyde dehydrogenase 263 454 - -
Cre06g2537 503 PANTHER BETAINE ALDEHYDE DEHYDROGENASE 1 502 - -
Cre06g2537 503 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 259 266 IPR029510 GO:0016491(InterPro)
Cre06g2537 503 FunFam NAD/NADP-dependent betaine aldehyde dehydrogenase 12 278 - -
Cre06g2537 503 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 267 458 IPR016163 GO:0016620(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre04g1447 Cre-Chr4:33279659 Cre06g2537 Cre-Chr6:33005941 4.60E-40 dispersed
Cre06g1221 Cre-Chr6:6087745 Cre06g2537 Cre-Chr6:33005941 3.90E-57 dispersed
Cre06g2537 Cre-Chr6:33005941 Cre06g2558 Cre-Chr6:33193422 1.40E-95 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre06g2537 K00130 - csv:101213657 954.896