Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cre06g2555 | ATGAGTAATGAGAGCAAGAGCAAGTCCCTAGCCATTGCAGCCAATAGCAAGAACAAGATAATCTCATTTCAGGTTTTTGGTTCTCTGTCCTTTCATTGTACTGTGGGAAAGCATTCTTGCTTGAGTTTGTTAGAGTTATCATCCACGGAGATGTTGGATTTTCCTCATACACCAAGAACGGTTCCACGGGTGATGACTGCTTCAGGAATATTTTCGGATAAGGACAGCGATTTGGAAGTTTCATCATCTAAATGCAGAGGGAGAAAAATTATAGTGGCAAATTTTCTCCCTCTTCATGCTAAAAAGGATCCAGATTCTGGAAAATGGAAATTCAGTTTTGATGAGGATTCAATTTTGCTTCAGCTGAAGGATGGCTTCTCACCTGATGTAGATGTTATATATGTTGGATCATTAAAGGTCGATGTTGATGTCCGAGAGCAAGATGAGGTTTCTCAGAAACTGCTGGAGGAATTCAACTGCGCACCAACTTTCATTCCTGCATACCTTCAGAAACAGTACTATCATGGATTCTGCAAGCAACATTTGTGGCCACTTTTTCATTACATGATGCCAATTTCCCCTTATCACGGATCTCGCTTTGATCGACATCTCTGGCAAGCGTATCTTTCAGTCAACAAAAGGTTTGCAGATAAAGTGATGGAGGTAATCAATCTTGAAGAAGATTATGTCTGGATTCATGATTATCACCTTATGGTTCTCCCTACTTTTTTGAGAAAACGCTACAGTCGAATTAAGCTCGGATTCTTCCTTCATAGTCTGTTTCCCTCATCAGAAATCTATCGAACTCTCCCTGTTAGAGATGAGATTCTGAGAGCATTACTTAACGTAGACCTAATCGGTTTCCATACATTTGATTATGCTCGCCACTTCCTATCTTGTTGTAGTAGACTGCTTGGTCTGGAGTATGAATCTAAACGTGGATATCTCACGCTCGAGTATTTTGGCCGTACGATATACATCAAGATTTTGCCTGTTGGAGTTCATATAGGTCGACTTGAATCTGCATTAAACCAACCGCACACTTCAATGAAGGTCAAGGAAATCAAAGAAAATCTCAAAGGAAAGAAACTTATTCTTGGTGTTGATGACATGGACATCTTTAAAGGTATTGGTCTGAAGTTATTAGCTATGGAACAGCTCTTGAAACAGCATCCAGAGTTAAGGGGCAATGTTGTTCTGGTGCAAATTCTAAATCCGGCACGGAGCAATGGGAATGATGTCCAGGAAGCAAAACGGGAAACTTATGAGATAACCAAAAGGATTAACAAGGTTTTTGGTTGTCCGGGATATGAACCTGTAATCTTGATTGATCATCCTATTCCTCCTCACGAGAAGATTGCATATTATGTATTAGCAGAGTGCTGCATTGTAAATGCTCTCAGGGATGGTATGAACTTAGTTCCGTATGAGTACATTGTTTGTCGACAGGGAACTTCAAAAATGGATGAACTCTTGGAAGTCTCCCCGAATTCACATCGTACCAGCACGATTGTCGTGTCCGAATTTATAGGTTGTTCACCATCTCTAAGTGGTGCAGTCAGGGTAAACCCCTGGGATTTTGATGCCGTAGCTGATGCACTTTATGCAGCTGTCACCATGCCTGCTTTAGAAAAGCAACTGAGGCACGAAAAGCATTACCGATATATTAGCTCTCACGATGTTGCTTACTGGGCTCGCAGTTTCTCACAAGATTTAGAGCGAGCATGCCGAGAACACTACAGTAAACGATGCTGGGGCATTGGTTTTGGTTTAAGTTTCAGAATTTTGTCACTCTCTCCAAGTTTCAGGAAGCTTTCCATTGAACACATTGGCTCTGCATATAGAAGCGCCTCTAGGAGGGCAATATTTCTGGATTACGACGGGACTGTGGTTTCTGAAACTTCGTTGGTTAAATCTCCGTCACCTGAAGTCATTTCTATCATCAACAACCTTTGCACGGATTCAAAGAACACTGTGTTTATAGTTAGTGGCAGGGGGAAAGATTCTCTCGGTTCATGGTTTGATTCGTGTAAGAATCTAGGTATTGCTGCTGAACATGGATACTATTTGAGGTGGAATAAGGATTCTGATTGGGAAGTTAGTCCATTAGCTGAAAACTTTTGTTGGAAAAGGATTGCAGAACCAGTGATGAAACTATATACTGAGGCCACCGATGGCTCATACATTGAGACCAAGGACAGTGCGTTGGTATGGCACCATCAAGACGCTGACCCTTATTTTGGTTCATGTCAGGCCATGGAGCTTTTGGACCACCTTGAAAATGTCCTTGCCAATGAACCCGTAGTTGTTAAAAGAGGTCAGCAGATCGTTGAAGTTAAACCTCAGGGTGTGACTAAAGGATTAGTTGCTGAAAGAGTTCTTTCCACAATGATCAACTCGAATAAAGCACCGGACTTTGTGTTGTGCATTGGAGATGATCGATCCGACGAAGACATGTTCGAGAGCATATCTAGCATAAGCTATAGCTCATCCCTTGCCAGCCCCCCAAAGATATTTGCCTGTACTGTGGGGCAAAAGCCTAGTAAAGCCAAATACTATTTAGATGATACCACCGACGTTTTGACCTTGCTTCAAAGCCTGGCCACTCCTTCTGCACATCAAACTGGAGAACACACCTTTACTGAGTCGGGATCGTCTCGATTGCCAGACTCTTTGCACAGTCACTGGTGCGAATGGGTTGAATTCAGGAAGATAATTGCTTGGCTAGAATATAGTGAACAGGTTTCAGATACAAATTACAATTAG | 2766 | 42.05 | MSNESKSKSLAIAANSKNKIISFQVFGSLSFHCTVGKHSCLSLLELSSTEMLDFPHTPRTVPRVMTASGIFSDKDSDLEVSSSKCRGRKIIVANFLPLHAKKDPDSGKWKFSFDEDSILLQLKDGFSPDVDVIYVGSLKVDVDVREQDEVSQKLLEEFNCAPTFIPAYLQKQYYHGFCKQHLWPLFHYMMPISPYHGSRFDRHLWQAYLSVNKRFADKVMEVINLEEDYVWIHDYHLMVLPTFLRKRYSRIKLGFFLHSLFPSSEIYRTLPVRDEILRALLNVDLIGFHTFDYARHFLSCCSRLLGLEYESKRGYLTLEYFGRTIYIKILPVGVHIGRLESALNQPHTSMKVKEIKENLKGKKLILGVDDMDIFKGIGLKLLAMEQLLKQHPELRGNVVLVQILNPARSNGNDVQEAKRETYEITKRINKVFGCPGYEPVILIDHPIPPHEKIAYYVLAECCIVNALRDGMNLVPYEYIVCRQGTSKMDELLEVSPNSHRTSTIVVSEFIGCSPSLSGAVRVNPWDFDAVADALYAAVTMPALEKQLRHEKHYRYISSHDVAYWARSFSQDLERACREHYSKRCWGIGFGLSFRILSLSPSFRKLSIEHIGSAYRSASRRAIFLDYDGTVVSETSLVKSPSPEVISIINNLCTDSKNTVFIVSGRGKDSLGSWFDSCKNLGIAAEHGYYLRWNKDSDWEVSPLAENFCWKRIAEPVMKLYTEATDGSYIETKDSALVWHHQDADPYFGSCQAMELLDHLENVLANEPVVVKRGQQIVEVKPQGVTKGLVAERVLSTMINSNKAPDFVLCIGDDRSDEDMFESISSISYSSSLASPPKIFACTVGQKPSKAKYYLDDTTDVLTLLQSLATPSAHQTGEHTFTESGSSRLPDSLHSHWCEWVEFRKIIAWLEYSEQVSDTNYN | 921 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 33151282 | 33156350 | - | CrPI670011_06g025550.1 | Cre06g2555 | 502017 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cre06g2555 | 921 | Pfam | Trehalose-phosphatase | 623 | 857 | IPR003337 | GO:0005992(InterPro) | |
Cre06g2555 | 921 | Gene3D | Glycogen Phosphorylase B; | 341 | 557 | - | - | |
Cre06g2555 | 921 | Pfam | Glycosyltransferase family 20 | 88 | 573 | IPR001830 | GO:0003824(InterPro)|GO:0005992(InterPro) | |
Cre06g2555 | 921 | FunFam | Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 | 749 | 879 | - | - | |
Cre06g2555 | 921 | NCBIfam | HAD-IIB family hydrolase | 621 | 822 | IPR006379 | - | |
Cre06g2555 | 921 | SUPERFAMILY | HAD-like | 620 | 868 | IPR036412 | - | |
Cre06g2555 | 921 | FunFam | alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 | 81 | 340 | - | - | |
Cre06g2555 | 921 | FunFam | alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 | 619 | 736 | - | - | |
Cre06g2555 | 921 | CDD | HAD_TPP | 621 | 860 | - | - | |
Cre06g2555 | 921 | FunFam | Alpha,alpha-trehalose-phosphate synthase | 342 | 557 | - | - | |
Cre06g2555 | 921 | Gene3D | Glycogen Phosphorylase B; | 81 | 340 | - | - | |
Cre06g2555 | 921 | Gene3D | - | 749 | 881 | IPR023214 | - | |
Cre06g2555 | 921 | Gene3D | - | 619 | 734 | IPR023214 | - | |
Cre06g2555 | 921 | PANTHER | TREHALOSE-6-PHOSPHATE SYNTHASE | 58 | 869 | IPR001830 | GO:0003824(InterPro)|GO:0004805(PANTHER)|GO:0005829(PANTHER)|GO:0005992(PANTHER)|GO:0005992(InterPro)|GO:0070413(PANTHER) | |
Cre06g2555 | 921 | SUPERFAMILY | UDP-Glycosyltransferase/glycogen phosphorylase | 88 | 577 | - | - | |
Cre06g2555 | 921 | FunFam | Trehalose-6-phosphate synthase 2 | 704 | 782 | - | - | |
Cre06g2555 | 921 | NCBIfam | trehalose-phosphatase | 617 | 868 | IPR003337 | GO:0005992(InterPro) | |
Cre06g2555 | 921 | CDD | GT20_TPS | 88 | 573 | IPR001830 | GO:0003824(InterPro)|GO:0005992(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cre06g2555 | Cre-Chr6:33151282 | Cre10g0401 | Cre-Chr10:2861517 | 0.00E+00 | dispersed | |
Cre05g2685 | Cre-Chr5:37798535 | Cre06g2555 | Cre-Chr6:33151282 | 0.00E+00 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cre06g2555 | K16055 | - | csv:101209676 | 1597.79 |