Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre06g2575 ATGACATCAAGTATGTTGAGTGGAGAAAGAAGGTGGACATCAGCCAGACGAGGTGGGATGACAGTTTTAGGAAAGGTTGCTGTTCCAAAACCTATAAACTTACCCAGTCAAAGGTTAGAAAACCATGGTTTGGACCCTAATGTGGAAATTGTACCCAAGGGTACCCTCAGTTGGGGCAATAAATCAACTTCATCTGCAACAAATGCATGGGGTTCCGCATCTGTTTCTCCAAATACAGATAGTGCTTCTGGTTCACCAAGCCATCTCTGTGGTCGCCCTTCATCTGCTGGAGGTGGCACTCGTCCGTCAACAGCTGGCAGTGACAGGTCCCACGAACCTCATGCTAATGCATGGGGACCAAGTTCCAGACCATCATCTGCATCTGGACCTGTGACATTAAGCCATGCATCACTCACATCCTTGCGCCCTCACAGTGCCGAAACTAAATCTAGTAGCTCACAATTGTCACGATTTGCAGAGACTTCTGAAAATCCAGTGGCTTGGAATTCTGCTGTGACTACAGAGAAAGTGGGAACGATGCCATGCAAGAGTGATGGGTTTTCTTTGACGTCTGGAGATTTTCCTACACTGGGTTCAGAGAAAGAAAGTGTAGGAAAGGATGCTGAGTCACAAGATAATAGGTCTAATGGAGGAGCTACGATGAAAGAGAGGACTGAAACTTCGGCAATTGATGATCCTAAAAATGTGACCACAAGTGTTGCAAGTGCTAATTCCTGGAGAAGTGATAATCTTCCACACAACGATGATGGATCTAGGCCAAATGTAGAGAAATGGCTGGGGCATCCCCAACCTTACCCTGGTGCAAATATTCCTCCCCCACATTATGACGCCTGGCATGGTTCTCCAGTAAACAATCCTCAAGGTGGTGTATGGTATAGAGGTCCTCCACAAGGAGGTCCTCCATATCGAACTCCAGTTGCTCCTGGTAATTTCCCGCTGGATCCATTTATGTATTATCCTCCACAGATTCCCCCTGGTGGCCTTCCCAATCCCCAGCCTCCTCATGGAACTGGACCCAGGGGACACCATCCTAAAACTGGAGATATATACAGACCACCTATGCATGATGGTTTTATTCACCCAGGCATGTCAATTAGACCTGGATTTTACCCGGGTCCAGTTACCTATGATGGATATTTTCGACCTCCCATGGGCTACTGCAATTCAAATGATAGAGATGCTCCATTTATGGGACTGCCTGCTGGGCCTACTGGGCCTGCTGGGCCTACTGGGCCTGCTGGACCTGCTGTTTACAACAGGTTCTTGGGCCAAGGCCAGAGTGCCTCTGAGCCTGCAAGTTCCCATGGCTTATCTAGTGGAAAGGGTATGGTTCCAGAACAAGCAGAATCTGGTCTTCCTTGTGATAATCAAGGACAATACAAGGTTCTTCTGAAGCAGCAGGGAAATGTAAATGGTAAGAACGAAGAAAAAAATATGATAAACTCAACAACCACTAATCAATTGATTCTTGAGAAGGCTGACCAACAGAGGGTGTCTCCATGGGAGAATGACTGGGAACATAAAAAGGAAGTTGATTTGAGGAGGAGAAAATTGGGGGTGGAACCGTATTCTCAGGCTTCTGCCAACCAAGAAGCTCAATCTTCTGAAAGTATGAAAGCCAAATCTCATGGAAACACGAGGACTGGTGATGGGTTACTAGAAAAATCGGATGCTGCTTCTTCTGGTTTCTCTGAAGTTCCCAAATCACTGGTTACTTCTGCAAAAGATTCAAGTCTGATTCAGAAGATAGAGGGATTAAATGCAAAAGCACGGGCTTCTGATGTGCGACATGATGGTGCCCCTATTTGTAGCAGGGATGAGCCAGATGAGTTTCAATCTGATGATAAGCACTCTGATCCTTTTGTTGCCCATGAAGTGGGTGTGAGTGCTGTTTTTCCTGAAAACAGAGATTTTAAAGAAGTCGTAGATCCTGCCTCCAGTGAATTAAGCTTGTCCACTGTAGATAGGAACGTTAAATTTCATGGTGGAGCACCTGTCCACAGGAGGCCTAATCGTGGAATGCAAGGGAGAAGTGATCATCATGGCCGAGGAAAAGGCAATGCACAGGAGGTAGATGGGTGGCATAAAAGACCTCTGTTGGACTCCCCAGGCATGATGGCAACTCCCAACCAGGAAAGTTTGGTGCTTGACAGGGACCACAATGCTTTAGGAGCTATCAATAAGGCCAAGCCATTTTCTTCAGATAGCCTTGGAGATGGGCCTGCTCCATCCATAGGTGATTCAAAAGATAGTCAAGCTCAGCGTACAAAGATGAGAGAGCTAGCAAAGCAACGCACCAAACAATTGCAGGAGGAAGAGGAGGAAAGGACTAGAAAACAGAGGGCTAGGGCCTTGGCAAAACTTGAAGAGTTGAACAGACGTACAGTAGCTGGGGAGGGGCCAAATCAGTGGTCTGACACTAATAATGATGCTATAAGAAATAAGATAGAAGAACCTCGCAATCCCAGTAATTCAAGAACGCTTGGTACTATATCTGGAGAGCATACCACAGTTTCTGATCTACATGTGGCTACTAATGATAGCGAGTCAACTGTGGGCACTAATAAAAATTCTCCCATTGTATCAGGAGATACATCATCGAAGAAACCAAGTAATGGCAATAAGGAACAGGTTGTGGCACATAATGAATTGAGATCTTTGGAGCAGGAGGTAAGTATTTCTGATGCTGCTCAAAATAAGAATGCTTCTGAGGTGAATGGGGGCAGTGCATCCTTGAAGCACAAGCGTACAGGAAATAAACAAAAACCAAATATTCCATCGGAAAAGATTCCCCATTTAATTAAGGAATCAAAAGGTCATTTAGTTGTAGCTGACATTCATACAGTTGCAGAGGAGTCGAGCAATATCATTACAGATTCTGTTGCTGAATTTTCAACACATACAAAAAAGAAAAATAACAAGAGTGGGAAGAACAGGCACAAAGTGGAAGAGGCCTTGATAACTGCATCATCACCTCAGATTTCAAAAGAAACAGATCTTATAACGGAATCTGATAAACCAAAGGCTTCTCAATCTGTAATGGATCCACCTTCAGATCCACAACAGCCAATTAATAGAGATGAAAATCAGTTCAGAGAGCAGCAACCTCTGTTACCAGTTGTAGAGACCCTTGGCAAAGGTAACGGTCAGTGGAAGTCTCAGCATTCTCGCAGGATGCCAAGAAATGCTCAAAATAGACCAGGAGAAAAGATCCATGGCAATGATTCTGTTGTCTGGGCCCCTGTGAGATCTCTCAACAAATGTGAGGTTACCGATGAAACTGTTCAGAAGAGTGAAGCAGAGTCTGTTGCTTCATCTGTAAAGACTGACAATCAAGTGCAGCATATTCCAAAAAATAAGCGAGCTGAAAGGGAGATATATGTACCGAAACCAGTAGCCAAAGAAATGGCGCAGCAAGGAACTATCCATCAAGATATTTCCCCTATGAACCAGGCACCTGATGATAATAAGGCCGATTCTAGTTCTCAAAGTTCTGATAATACTAGATCTGCTGGTGCTGTTTCTGTCAATGTGGGATTTTCCACAGATCACAGGAACGGGGATGGCAGGCACCATAAACAAAGCAAGGCACATTCATCATGGCGACAACGGGGAGCATCAGAATATGGGCAAGGCTTACAAGATCAATCTTCTTATGTTTCAAATGCTGGTAGTTATGTTCAAAAGTCAATTGAATATCAATTACCTGAGAAGGCTACCGGAAGCTCTGCCAATGAGTTCGCTGGTCTGGTTGATGAGTGGGATCCACCTGATGGATGGAATGATCCCAACTATTCAGCCTCTATCCAACCTGTCACTGCAGCTGTTGGAAGAGACCAGGGAGTGACAGGCAGGGGAAAACGATCCCAATCTAAGGGAAACAAGGCTGTAGGGAACAATTATGATTTAAATGAAAAGAAACTTAGAAGTGGAGACAACGAAAAAATTTCTTCTGGATCTGAAGTGCTCGAGGCAGATCAAAAAGATGTATCTGCTGCTGCTGCTAAAGAAATTCGGGGTGTTGGGGAACGTTCAACATCTCATTGGCAACCCAAATCGCGGATGGTCCAACCTCACAGTAATCAAAATGTTGATGCTGAAGCTGCACAGGCTAATAAAATGGGACCTAGACAATCCTCACATCGCACAAAAACAAGTGATGATGTGGCCCAAAACCAGTATGATACGTCCACTGGTGCAAGAACCATCACAGAAGAGGGATCAATTGCTGGTCATCATGGGGCCAGGGGAGAGAAGAAAATTTCTTCCCGCAAGGAGCGTCCTTACTCCCCAAACCAAGGGCCTACCCATACAGTAGAGGTTGCTCCTGCAAATACAGATGTCAGACGTGAGCAACAGTTGCCTATGTTTTACCATAAAGGTGGTGAGAACAATAACCGTTATGGAAGAGGGTCGGAATCTCGTCGGGAAAGGAATAACTCTCAACATCATAAGCAGCAGCATTATCCACCTGCTAATAGAGACAGGCAAAGACAAAATCTGCAGTATGAGTACCAACCAGTTGGGCCACACAATAGTAAACCGAACATGGACAGACCTAAGGATACGACTCAGCATTCAGGCTCAAGGTACGTGGAGAGGGGCCAAGGGCAGTCCAGAAGAGATGGTGGGAACTTTTACAAGCAACAAGGTGGACCAGGCAGTAGGACTAGGAACCTGATTCGACGGTGCAGGAGAAAACGGTTTGGAGTTGGATGGAGGAGGATGGTCGGACTTGTTTATTTTGTAGGGACTCGCTTTTTCTTCAATTCTATCCAGTACCTCATGGATTCCACTGCTCTGGGTTCCATTACAACAACCTCGAGCCTTTTATCATGGAGCCAAGGATTGAAGTTGAAGCAATGTATAAAGACTTCAAAATTTTTTGGGAAAGCTGATAGGTGTATGCTGTTAAAGCAAAAGATCCAGTTAAGTGCAGGGCCTCCGTCCAGATGTGGATCAAAATTTAAGCTTTTGAGAATATCAGCCTTCAAAAACAGCGTTCCAAATGGTGAACCTAGGAATGGAGAAAATCTGTCTGAAGTTCCAAAGGATACAAGAGAAGATGGTGATGTTTCATCAAAAGTTACTTTGAAAGAAAATAATGTTGTACTATCTTCTACATCTGGAATAGTCAATTGGATTGCACCACACCCTTTTATTAATAAATTATTCAGGAAATGGCCGACAATGTTATGTAATCAACAAGCAAGTGAAGAAGTGGATGGGATTTTGGGAAGGATGTCGTTGAGTGAGAATTCAGCAACTCTACAAGAGGCTCATAATATGAAAAGACGTGAGAGCTTAGAAGCACTTTGGTACTACTTTCTCAGTCTGGATACCATGATTAAAATCCCTCTGTTGATGTTTGTTCCCTTGTATCTGACAATCAAAATCTCTTATGGAGCCCAAGTTTCAAAAGAACTGATGCCTTTGTGGGTGTTTGGGCCATTCATTGTAGCTTTCTACATCAAGATGTTTCACTGGTTGTGTTGTCTCTCAATCTTGAGCTTCAAGCAAACTGCATATTTGATGAAAAACTTTCCCTGTTATTACAAGCTAGCCTGTGACTATGTTTCCCATGGGAGACTTAAAGAGGCGATACAAGCTCGGGTCTGGGAACCTGTAGTGGATATTAGGAACCTCCATGATAAAGAGTTGTCGAGAAGAAAGTTCAAATTTATGCAAGAATGGATTATGGAGAGGTACCTGGAATTTCTAGAATTACTTGGGGTAGTTAAAAATGTAGCCGGAGCTGTTAAGTTCTATGATACTTGTAAGGCTGCTTCACTATTTCCAAATGTTTTGAAGAGGCCTCTCTTTGTATCAATTTCGTTATCATTTTTGGCTCTCCTTTCTGTAGACTGTTCATGA 5895 44.04 MTSSMLSGERRWTSARRGGMTVLGKVAVPKPINLPSQRLENHGLDPNVEIVPKGTLSWGNKSTSSATNAWGSASVSPNTDSASGSPSHLCGRPSSAGGGTRPSTAGSDRSHEPHANAWGPSSRPSSASGPVTLSHASLTSLRPHSAETKSSSSQLSRFAETSENPVAWNSAVTTEKVGTMPCKSDGFSLTSGDFPTLGSEKESVGKDAESQDNRSNGGATMKERTETSAIDDPKNVTTSVASANSWRSDNLPHNDDGSRPNVEKWLGHPQPYPGANIPPPHYDAWHGSPVNNPQGGVWYRGPPQGGPPYRTPVAPGNFPLDPFMYYPPQIPPGGLPNPQPPHGTGPRGHHPKTGDIYRPPMHDGFIHPGMSIRPGFYPGPVTYDGYFRPPMGYCNSNDRDAPFMGLPAGPTGPAGPTGPAGPAVYNRFLGQGQSASEPASSHGLSSGKGMVPEQAESGLPCDNQGQYKVLLKQQGNVNGKNEEKNMINSTTTNQLILEKADQQRVSPWENDWEHKKEVDLRRRKLGVEPYSQASANQEAQSSESMKAKSHGNTRTGDGLLEKSDAASSGFSEVPKSLVTSAKDSSLIQKIEGLNAKARASDVRHDGAPICSRDEPDEFQSDDKHSDPFVAHEVGVSAVFPENRDFKEVVDPASSELSLSTVDRNVKFHGGAPVHRRPNRGMQGRSDHHGRGKGNAQEVDGWHKRPLLDSPGMMATPNQESLVLDRDHNALGAINKAKPFSSDSLGDGPAPSIGDSKDSQAQRTKMRELAKQRTKQLQEEEEERTRKQRARALAKLEELNRRTVAGEGPNQWSDTNNDAIRNKIEEPRNPSNSRTLGTISGEHTTVSDLHVATNDSESTVGTNKNSPIVSGDTSSKKPSNGNKEQVVAHNELRSLEQEVSISDAAQNKNASEVNGGSASLKHKRTGNKQKPNIPSEKIPHLIKESKGHLVVADIHTVAEESSNIITDSVAEFSTHTKKKNNKSGKNRHKVEEALITASSPQISKETDLITESDKPKASQSVMDPPSDPQQPINRDENQFREQQPLLPVVETLGKGNGQWKSQHSRRMPRNAQNRPGEKIHGNDSVVWAPVRSLNKCEVTDETVQKSEAESVASSVKTDNQVQHIPKNKRAEREIYVPKPVAKEMAQQGTIHQDISPMNQAPDDNKADSSSQSSDNTRSAGAVSVNVGFSTDHRNGDGRHHKQSKAHSSWRQRGASEYGQGLQDQSSYVSNAGSYVQKSIEYQLPEKATGSSANEFAGLVDEWDPPDGWNDPNYSASIQPVTAAVGRDQGVTGRGKRSQSKGNKAVGNNYDLNEKKLRSGDNEKISSGSEVLEADQKDVSAAAAKEIRGVGERSTSHWQPKSRMVQPHSNQNVDAEAAQANKMGPRQSSHRTKTSDDVAQNQYDTSTGARTITEEGSIAGHHGARGEKKISSRKERPYSPNQGPTHTVEVAPANTDVRREQQLPMFYHKGGENNNRYGRGSESRRERNNSQHHKQQHYPPANRDRQRQNLQYEYQPVGPHNSKPNMDRPKDTTQHSGSRYVERGQGQSRRDGGNFYKQQGGPGSRTRNLIRRCRRKRFGVGWRRMVGLVYFVGTRFFFNSIQYLMDSTALGSITTTSSLLSWSQGLKLKQCIKTSKFFGKADRCMLLKQKIQLSAGPPSRCGSKFKLLRISAFKNSVPNGEPRNGENLSEVPKDTREDGDVSSKVTLKENNVVLSSTSGIVNWIAPHPFINKLFRKWPTMLCNQQASEEVDGILGRMSLSENSATLQEAHNMKRRESLEALWYYFLSLDTMIKIPLLMFVPLYLTIKISYGAQVSKELMPLWVFGPFIVAFYIKMFHWLCCLSILSFKQTAYLMKNFPCYYKLACDYVSHGRLKEAIQARVWEPVVDIRNLHDKELSRRKFKFMQEWIMERYLEFLELLGVVKNVAGAVKFYDTCKAASLFPNVLKRPLFVSISLSFLALLSVDCS 1964
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 33446915 33460665 - CrPI670011_06g025750.1 Cre06g2575 502037

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cre06g2575 1964 MobiDBLite consensus disorder prediction 56 90 - -
Cre06g2575 1964 MobiDBLite consensus disorder prediction 597 625 - -
Cre06g2575 1964 MobiDBLite consensus disorder prediction 1053 1080 - -
Cre06g2575 1964 MobiDBLite consensus disorder prediction 1291 1305 - -
Cre06g2575 1964 MobiDBLite consensus disorder prediction 735 789 - -
Cre06g2575 1964 MobiDBLite consensus disorder prediction 1104 1120 - -
Cre06g2575 1964 MobiDBLite consensus disorder prediction 1685 1699 - -
Cre06g2575 1964 MobiDBLite consensus disorder prediction 231 251 - -
Cre06g2575 1964 MobiDBLite consensus disorder prediction 902 921 - -
Cre06g2575 1964 MobiDBLite consensus disorder prediction 821 884 - -
Cre06g2575 1964 MobiDBLite consensus disorder prediction 119 163 - -
Cre06g2575 1964 MobiDBLite consensus disorder prediction 759 789 - -
Cre06g2575 1964 MobiDBLite consensus disorder prediction 1476 1499 - -
Cre06g2575 1964 MobiDBLite consensus disorder prediction 1054 1068 - -
Cre06g2575 1964 MobiDBLite consensus disorder prediction 178 280 - -
Cre06g2575 1964 MobiDBLite consensus disorder prediction 1353 1411 - -
Cre06g2575 1964 Pfam BAT2 N-terminus 13 135 IPR009738 -
Cre06g2575 1964 CDD UDM1_RNF168_RNF169-like 759 801 - -
Cre06g2575 1964 MobiDBLite consensus disorder prediction 828 884 - -
Cre06g2575 1964 MobiDBLite consensus disorder prediction 54 163 - -
Cre06g2575 1964 MobiDBLite consensus disorder prediction 1284 1565 - -
Cre06g2575 1964 MobiDBLite consensus disorder prediction 1012 1033 - -
Cre06g2575 1964 MobiDBLite consensus disorder prediction 1102 1124 - -
Cre06g2575 1964 MobiDBLite consensus disorder prediction 530 551 - -
Cre06g2575 1964 MobiDBLite consensus disorder prediction 902 934 - -
Cre06g2575 1964 MobiDBLite consensus disorder prediction 1153 1189 - -
Cre06g2575 1964 PANTHER PROTEIN MODIFIER OF SNC1 1 1 1555 IPR038808 GO:0040029(PANTHER)
Cre06g2575 1964 MobiDBLite consensus disorder prediction 1676 1699 - -
Cre06g2575 1964 MobiDBLite consensus disorder prediction 433 462 - -
Cre06g2575 1964 MobiDBLite consensus disorder prediction 528 572 - -
Cre06g2575 1964 Coils Coil 762 801 - -
Cre06g2575 1964 MobiDBLite consensus disorder prediction 1312 1329 - -
Cre06g2575 1964 MobiDBLite consensus disorder prediction 667 697 - -
Cre06g2575 1964 MobiDBLite consensus disorder prediction 993 1033 - -
Cre06g2575 1964 MobiDBLite consensus disorder prediction 1153 1222 - -
Cre06g2575 1964 MobiDBLite consensus disorder prediction 331 345 - -
Cre06g2575 1964 MobiDBLite consensus disorder prediction 1549 1563 - -
Cre06g2575 1964 MobiDBLite consensus disorder prediction 1500 1516 - -
Cre06g2575 1964 MobiDBLite consensus disorder prediction 1207 1222 - -
Cre06g2575 1964 MobiDBLite consensus disorder prediction 679 697 - -
Cre06g2575 1964 MobiDBLite consensus disorder prediction 1418 1433 - -
Cre06g2575 1964 MobiDBLite consensus disorder prediction 331 355 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre06g2575 - - - - 0.0
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre01g1254 Cre-Chr1:25736696 Cre06g2575 Cre-Chr6:33446915 2.50E-69 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi17g781 . . . . . . . . . . Cma10g00119 Cma11g00088 Car10g00106 Car11g00079 Sed08g0103 . Cpe04g01566 Bhi02g00478 Tan09g2266 Cmetu02g1512 . Hepe09g0213 . . Cla06g01673 Cam06g1861 Cec06g1911 Cco06g1916 Clacu06g1817 Cmu06g1758 Cre06g2575 . . . . . . . . . Blo15g00262 . . Bpe07g00848 . . . . Cmo10g00123 Cmo11g00088 . . . . . Cpe18g00849 . . . . . . . . . . . . . . Lsi06g01564 Csa01g00136 Chy02g02591 Cme02g01988
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0006102 0 1 1 0 2 1 3 1 1 1 1 1 2 1 1 2 1 2 2 1 1 1 1 1 1 1 1 5 1 1 39