Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cre06g2605 | ATGGAGACTCTTCTTCATCATCTTCTTCCTCTTCAACTGTCACTTCATTCAATTTCCTTCACTATTTTCATCCTCATCCTCATCTTCCTTCTCCAAAAATGGCTTCTCTCCCCTTCACAAACCTCCCCTCCATCACCCCCAAAGCTTCCAATCTTCGGCCATCTTCTCAACCTCGGCTCCCATCCTCATCTCACTCTCCTAAACTACGCTCGCCGCCATGGTCCTCTGTTTCTCCTCCGCCTCGGCTCTGTTCCCACCATCGTCGTTTCTTCCTCCGATCTCGCTCGTGATATCATGAAAACCCACGATCTCGTCTTCGCCAACCGACCCAAATCAACCATTGGCCACAAGCTTCTTTACAGCTCCAGAGACATAGCCGCTTCTCCCTACGGCGAGTACTGGCGGCAGATGAAAAGCGTTTGCGTTCTTCATCTCTTGAGCAGCAAAAGAGTTCAATCCTTCCGTTCTATAAGGGAAGAAGAAGTCAAATGCATGATCGAGAAGATCCACCACAACCCTGTTTCGGTGAATTTGACTGAAATCTTCTCTGGATTGACTAACAATGTGATTTGCAGAGTGGGTTTGGGGAGAAAATATGGAGAGGGAGAAGATGGGAAGAAGTTCATGGATCTTTTATTGGAATTTGGGCAATTATTAGGGAGTTTTAGCATTAGAGATTTCATTCCATGGTTGGGTTGGATTGATGGGATTAGTGGGCTGGATTCTAAAGCAAACAGAGTAGCTAAAGAGCTGGATGATTTCTTTAACAGAGTGATTGAAGATCATATCAATCTAGAAAACAGAGACCAGCATTTTGATGAGCATAAGGATTTGGTAGATGTTTTGCTTTGGATACAGAGAGAAAACTCCATTGGTTTTCCCCTTCAGATGGATAGCATCAAAGCTTTAATCTTGGACATGTTTGCAGCAGGCACAGACACAACTTACACAGTATTAGAATGGGCAATGTCAGAATTGTTGAAACACCCAGAAGCCATGGAGAAACTGAAGAATGAAATTAAAGAAATAAAAGGTGATCACAAAGGGTGCTATGTAAACGAGGATGATTTAGACAAAATGGTATATTTAAAGGCAATAATCAAAGAGACATTGCGACTACACCCACCCATCCCACTTCTCGTCCCAAGAGAATCAACCCAACACATAAAGTTAAGAGGGTATGACATTAAACGTGGGACTCGAGTTATGATCAATGCATGGGCAATCGGAAGAGACCCAAAATTATGGGAAGAAGTAGAGGAGTTTCGACCAGAAAGATTTATGAACAATTCAATAGATTTCAAGGGAACCTTTGGTTTAACCACTCATAGAAAGTTTCCACTTGTGGCTACCGCAATTCCTAACAAGGAATGA | 1374 | 42.94 | METLLHHLLPLQLSLHSISFTIFILILIFLLQKWLLSPSQTSPPSPPKLPIFGHLLNLGSHPHLTLLNYARRHGPLFLLRLGSVPTIVVSSSDLARDIMKTHDLVFANRPKSTIGHKLLYSSRDIAASPYGEYWRQMKSVCVLHLLSSKRVQSFRSIREEEVKCMIEKIHHNPVSVNLTEIFSGLTNNVICRVGLGRKYGEGEDGKKFMDLLLEFGQLLGSFSIRDFIPWLGWIDGISGLDSKANRVAKELDDFFNRVIEDHINLENRDQHFDEHKDLVDVLLWIQRENSIGFPLQMDSIKALILDMFAAGTDTTYTVLEWAMSELLKHPEAMEKLKNEIKEIKGDHKGCYVNEDDLDKMVYLKAIIKETLRLHPPIPLLVPRESTQHIKLRGYDIKRGTRVMINAWAIGRDPKLWEEVEEFRPERFMNNSIDFKGTFGLTTHRKFPLVATAIPNKE | 457 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 6 | 33733432 | 33735535 | + | CrPI670011_06g026050.1 | Cre06g2605 | 502067 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cre06g2605 | 457 | Pfam | Cytochrome P450 | 43 | 433 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre06g2605 | 457 | CDD | CYP71-like | 72 | 437 | - | - | |
| Cre06g2605 | 457 | PRINTS | P450 superfamily signature | 310 | 327 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre06g2605 | 457 | PRINTS | P450 superfamily signature | 365 | 376 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre06g2605 | 457 | PANTHER | CYTOCHROME P450 71B11-RELATED | 21 | 437 | IPR050193 | - | |
| Cre06g2605 | 457 | SUPERFAMILY | Cytochrome P450 | 43 | 452 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre06g2605 | 457 | Gene3D | Cytochrome P450 | 37 | 446 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre06g2605 | 457 | PRINTS | E-class P450 group I signature | 70 | 89 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre06g2605 | 457 | PRINTS | E-class P450 group I signature | 299 | 316 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre06g2605 | 457 | PRINTS | E-class P450 group I signature | 94 | 115 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre06g2605 | 457 | PRINTS | E-class P450 group I signature | 185 | 203 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre06g2605 | 457 | PRINTS | E-class P450 group I signature | 364 | 382 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre06g2605 | 457 | PRINTS | E-class P450 group I signature | 405 | 429 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre06g2605 | 457 | PRINTS | E-class P450 group I signature | 319 | 345 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre06g2605 | 457 | FunFam | Cytochrome P450 83B1 | 30 | 442 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cre03g0617 | Cre-Chr3:5100108 | Cre06g2605 | Cre-Chr6:33733432 | 1.40E-82 | dispersed | |
| Cre06g2605 | Cre-Chr6:33733432 | Cre07g1816 | Cre-Chr7:33543150 | 9.50E-80 | dispersed | |
| Cre03g0614 | Cre-Chr3:5062887 | Cre06g2605 | Cre-Chr6:33733432 | 2.00E-104 | wgd | |
| Cre05g2757 | Cre-Chr5:38380055 | Cre06g2605 | Cre-Chr6:33733432 | 9.30E-79 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cre06g2605 | - | - | - | 0.0 |