Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre06g2681 ATGGGTGTGTCAAAAGATGGGCAACGACAATCTCTGGTGCCAAGCTTTGTGTATTCTGGCAACAGGGGATGTTTCCAAACCCAAACACTGGTTAGTCGCTTCCCAATTGAAGCTCCGAAAGAGAATATAAAGATGTATTCACCGGCCTTCTACGCGGCTTGCACAGCAGGCGGCATTTTGAGTTGTGGACTCACCCACATGGCTGTCACCCCCCTCGATCTCGTCAAGTGCAACATGCAGATCGACCCAGCAAAGTACAAGAATATCTCGTCTGGTTTTGGAATTCTGCTAAAGGAGCAGGGAGTGAAAGGGTTCTTCCGGGGTTGGGTGCCAACGTTGCTTGGTTACAGTGCTCAGGGTGCCTGCAAGTTTGGATTTTACGAGTTCTTCAAGAAGTACTATTCTGATATGGTTGGAACAGAGAATGCAGTCAAGTACAAAACTTTCATATACCTTGCTGGCTCAGCATCTGCAGAAGTGATTGCCGATGTCGCTCTCTGCCCCATGGAGGCCGTCAAAGTTCGTGTCCAGACTCAACCTGGCTTTGCTCGGGGTTTGTCAGATGGCCTTCCAAAGTTTGTCAAGTCTGAGGGTGCTCTGGGCCTCTACAAAGGTCTGGTTCCTCTTTGGGGACGTCAGATTCCATATACCATGATGAAATTTGCTTCTTTCGAAACAATTGTTGAGATGCTTTACAAGTATGCCATCCCAAGGCCAAAAGAACAGTGTAGCAAATCTCTGCAGCTTGGAGTGAGTTTTGCCGGAGGGTATGTGGCCGGCGTCCTCTGTGCTGTGGTCTCACACCCAGCCGACAATCTTGTCTCTTTTCTCAACAATGCCAAGGGTGCAACTGCTGGGGATGCTGTCAAGCAGCTGGGAGTATGGGGTCTCTTCACTCGTGGCCTTCCGCTTCGGATTGTTATGATTGGAACTCTTACTGGGTCGCAATGGGGTATATACGACGCGTTCAAAGTTTTCGTTGGACTGCCAACAACTGGTGGCGCTACCCCTGCTCCTGCCGCTAGCAAGTGA 1032 49.9 MGVSKDGQRQSLVPSFVYSGNRGCFQTQTLVSRFPIEAPKENIKMYSPAFYAACTAGGILSCGLTHMAVTPLDLVKCNMQIDPAKYKNISSGFGILLKEQGVKGFFRGWVPTLLGYSAQGACKFGFYEFFKKYYSDMVGTENAVKYKTFIYLAGSASAEVIADVALCPMEAVKVRVQTQPGFARGLSDGLPKFVKSEGALGLYKGLVPLWGRQIPYTMMKFASFETIVEMLYKYAIPRPKEQCSKSLQLGVSFAGGYVAGVLCAVVSHPADNLVSFLNNAKGATAGDAVKQLGVWGLFTRGLPLRIVMIGTLTGSQWGIYDAFKVFVGLPTTGGATPAPAASK 343
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 34293797 34295243 - CrPI670011_06g026810.1 Cre06g2681 502143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre06g2681 343 Pfam Mitochondrial carrier protein 147 234 IPR018108 -
Cre06g2681 343 Pfam Mitochondrial carrier protein 51 136 IPR018108 -
Cre06g2681 343 FunFam Phosphate carrier protein, mitochondrial 49 327 - -
Cre06g2681 343 ProSiteProfiles Solute carrier (Solcar) repeat profile. 146 230 IPR018108 -
Cre06g2681 343 ProSiteProfiles Solute carrier (Solcar) repeat profile. 49 133 IPR018108 -
Cre06g2681 343 PANTHER SOLUTE CARRIER FAMILY 25 (MITOCHONDRIAL CARRIER PHOSPHATE CARRIER), MEMBER 3, LIKE-RELATED-RELATED 36 335 IPR044677 GO:0005315(PANTHER)|GO:0005315(InterPro)|GO:0031305(PANTHER)|GO:0035435(PANTHER)|GO:1990547(InterPro)
Cre06g2681 343 SUPERFAMILY Mitochondrial carrier 52 322 IPR023395 -
Cre06g2681 343 Gene3D Mitochondrial carrier domain 49 327 IPR023395 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre06g2681 Cre-Chr6:34293797 Cre09g1754 Cre-Chr9:35914676 1.00E-163 dispersed
Cre06g2681 Cre-Chr6:34293797 Cre09g1151 Cre-Chr9:12709207 3.10E-11 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre06g2681 K15102 - csv:101220423 612.068