Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre06g2694 ATGCATCGACTAAGTAAGCTAAGTGATAGGGTTAGGTTGGGTGCAGCAGCTCTCTTCCCACCCACCCCTTGCTCTTGTTTTCTTTCTCTCTGTGGCCTCTTGTCTCCTGAGTCCTGTGAGTTGAGATTTGCGACCCCAGAGGGTAGCAAAGGAAGGTCGGAAAAAGAGCGACAGGTTGAGTTGTTTGTAGTTGTGTACCCCTACGCATACACGCAAAACACTACCACTACCACTACCACTACCACTACACATCCAATTCCGGTAATGGATCCAGAAGCTCTCTCAGCCACTTTGTTCAAATGGGATCCTCGAGGAATGGTGGGGGGCGGCAGCGGCGCACCCCTCCCAGCGCCACTGCCCCCCTACTCGCTGCGGCCCAGGGAGTTGGGATTGGGAGGCCTCGAGGACTTGTTCCAGGCTTACGGAATCAGGTACTACACCGCTGCTAAAATTGCGGAACTTGGATTCACCGTTAGCACCCTCCTGGACATGAAAGACGAAGAGTTAGAGGATATGATGAACAGCCTCTCTCACATTTTTCGTTGGGACCTTCTGGTGGGTGAGAGGTACGGTATTAAGGCTGCTGTAAGAGCCGAGCGCAGACGTCTAGATGACGAGACCGATTCCTCCAGGCGCCGCCACCTCTTGTCCAATGACAACACAACCAACGTCGTCCTCGATGCCCTCTCTCAGGAAGGGCTGTCGGAAGAACCGGTGCAGCAGGAGAAGGAGGCGGTTGGAAGTGGAGGAGGAGGAGCGTGGGAGGCAGTTGCAGCCGCTGAGATCAGGAAGAAGCAGCGGAGGAAAAACGGATCAAAAAAGAAGCAGGTGATGGTGATGGAGGAGGATCACGATGAAAACGAGGGAGCTGGGGACGAGGAGGAGAATATGGAAGTCAGCGAGAGACAGCGGGAGCATCCATTCATCGTAACCGAGCCAGGGGAGGTTGCACGGGGAAAGAAGAACGGCCTCGACTATCTCTTTCACTTATATGAGCAGTGTCGTGAATTTTTGATCCAAGTCCAGAACATTGCCAAGGAACGAGGAGAAAAATGCCCCACTAAGGTGACGAACCAGGTGTTTAGATATGCAAAGAAGGCGGGAGCAAGTTACATAAACAAGCCCAAAATGAGACACTACGTGCACTGCTATGCCCTGCACTGTCTAGACGAGGAAGCGTCGAACGCATTGAGGAGCGTTTTCAAAGAGAGGGGCGAAAATGTGGGAGCCTGGCGACAGGCATGTTATAAGCCTCTGGTAGCCATAGCAGCTGCCCAAGGTTGGGACATCGATGCCATTTTCAACGCACATCCGCGCCTCGCCATCTGGTATGTGCCTACCAAACTCCGTCAACTCTGCCATGCCGAGCGCAACGGTTCCACAGCCTCCACCTCAGCCGCCGCACCTCACTTGCCTTTTTAG 1422 53.73 MHRLSKLSDRVRLGAAALFPPTPCSCFLSLCGLLSPESCELRFATPEGSKGRSEKERQVELFVVVYPYAYTQNTTTTTTTTTTHPIPVMDPEALSATLFKWDPRGMVGGGSGAPLPAPLPPYSLRPRELGLGGLEDLFQAYGIRYYTAAKIAELGFTVSTLLDMKDEELEDMMNSLSHIFRWDLLVGERYGIKAAVRAERRRLDDETDSSRRRHLLSNDNTTNVVLDALSQEGLSEEPVQQEKEAVGSGGGGAWEAVAAAEIRKKQRRKNGSKKKQVMVMEEDHDENEGAGDEEENMEVSERQREHPFIVTEPGEVARGKKNGLDYLFHLYEQCREFLIQVQNIAKERGEKCPTKVTNQVFRYAKKAGASYINKPKMRHYVHCYALHCLDEEASNALRSVFKERGENVGAWRQACYKPLVAIAAAQGWDIDAIFNAHPRLAIWYVPTKLRQLCHAERNGSTASTSAAAPHLPF 473
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 34386483 34388673 - CrPI670011_06g026940.1 Cre06g2694 502156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre06g2694 473 PANTHER PROTEIN LEAFY 89 467 IPR002910 GO:0003677(InterPro)|GO:0006355(InterPro)
Cre06g2694 473 Gene3D Protein LEAFY 299 467 IPR038276 -
Cre06g2694 473 Pfam Floricaula / Leafy protein SAM domain 131 207 IPR035079 -
Cre06g2694 473 Pfam DNA Binding Domain (C-terminal) Leafy/Floricaula 298 461 IPR035209 GO:0003677(InterPro)
Cre06g2694 473 MobiDBLite consensus disorder prediction 264 302 - -
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
53970 PF17538 C_LFY_FLO 3.00E-107 CL0123 Cre TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre06g2694 - - - 0.0