Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cre07g0511 | ATGCCTTTCTCGACTTTGCACCTTCTTTTGGTTCTTCATGCGTTCGATTTGCTTTTCTCTTGCTCAGGACAATCTTCAGTTTCACCACACATATACTTATCTCCTTCCTTACAGCCAAACCTGCAAACAATGACCACGGAAATGTCAACAGAGCATGCAAGGTTGGAGTCTATAAGTTTTTCATTTGTGCCTTCAAAGTTACGTGGTAACTGGATATTTAAGTCTTCTTTGGGACCATCTACTGCTCCTGCACCCTCTCCAGGTCCTAGGAGTGCACCCTTACCCATCCGACATCATCGACGGCGTCGTGGACGACCTCATGTGGTTGCTCCTACCCCATCAAAAGACCAAGGTTGTGATCAAATATGCATGGAGCCCCTTACTGCAGCTCCCTTTGGTTCACCTTGTGGCTGTGTGTTTCCCATGAAAGTCAGACTTCTTCTGGATATAGCTCCATATGCTGTTTTCCCTGTGATGAACGAGCTTGAAAGTGAGATTGCAGTGGGGACTTACTTGGAGCAGAGCCAAGTGAAAATCATGGGTGCAACTGCAGACAGTCAAAATCAAGGAAGAACTATGGTGGACATAAATTTAGTACCTCTAGGAGAGAAGTTTGATAATACAACTGCAGTTCTGACATACAGAAGGTTTTGGGATAAAAAAGTGCATTTAAATATGACGCTTTTTGGTGATTATGAAGTTGTCTACATCAGCTATCCAGGGATTCCTTCTTCCCCGCCATATGGAGGGTACATGGGAAGTGCTCCTAGTGGAAGTGCGGGTGATCTTCCCATTACTGCAAATTTCGTTAATAAGAGCCAGAAGATGAATGTCAAAACAATTGCCATCATAGCACTTTCAGCATTTGTTGTGTTATTAGTGTTCATTGGAGCTCTCTCCATCTTTTTTAAATGGAGAAAAGTTGGCAGACCATCTAGTGCCGTTGGCCCTGTCTTCACGTCATCAATTAACAAAAGATCTGGTCTAGGATCAGCCTTATCAAGTAGCATTGCAAGCTCCACCTCTGTTTCCCTAATTTCCACAATGCCAACCAGTCTTCAATCTGTTAAAACATTTGCACTTTCTGAACTTGAGAAAGCAACAGACAAGTTTAGTTCAAAAAGGATTTTAGGTGAAGGGGGATTTGGCCGAGTTTACTGTGGTATTTTGGAAGATGGAAATGAAGTTGCAGTTAAGTTGCTTACTCGGGACAATCAGAATAGAGACCGTGAATTTATTGCCGAAGTTGAGATGTTGAGTAGACTACATCATCGGAATCTTGTGAAACTGATTGGGATATGCATTGAAGGGCGAACTCGCTGCTTAGTTTATGAGCTTGTCCATAATGGCAGTGTTGAGTCTCACTTGCATGGCATTGACAAGAGAAAAGGACCTCTTGACTGGGACGCACGATTAAAGATTGCTCTTGGAGCAGCAAGAGGTTTGGCATATCTTCATGAAGATTCTAATCCCCGCGTTATTCACCGTGATTTCAAGGCAAGTAATGTTCTGTTGGAAGTTGACTTCACCCCCAAGGTTTCGGATTTTGGATTGGCTAGGGAAGCAACTGAAGGAAGTGAACATATCTCAACACGGGTGATGGGGACTTTCGGGTATGTAGCCCCTGAATATGCAATGACTGGGCACCTGCTCGTCAAAAGTGATGTTTACAGTTATGGAGTCGTGCTACTTGAGCTTCTTTCAGGAAGAAAACCGGTGGACATGTCCCAACCACATGGTGAGGAGAACCTCGTAACGTGGGCGCGACCTCTATTGACCAGTAGAGAAGGTTTGGAGCAACTAGTGGATCCTTCTCTAGCTGGTACTTACGACTTCGATGACATGGCCAAGGTGGCTGCCATAGCTTCAATGTGCGTTCACCCAGAGGTGACCCAGAGGCCATTTATGGGAGAAGTTGTGCAGGCTCTAAAACTAATATACAACGACACAGACGAGACGTGTGCAGATTACTGCAGTCAAAAGGAGTCCTCTGCTCGGGACTCAGATTTCAAAGGCGACCTTGTCCCATCCGACAGCAGTTGGTGGAATGCCGGTGGCCTTACACCCCGACTGACATATGGTCAAGCCTCTTCCTTCATCACCATGGAATACAGCTCTGGCCCTCTTGAAGAGATGGAAAACCGCCCGTTTTCAACTTCAAGTTTGGTAGGTGACGAGATATCTTTGCCTATTCGGCATGGAAACAGGTCAGGTCCGTTACGAACTGCTCGAAGCAAGCCTGCGTTCTATAGATTTTCAGGAAGTAGGAGCGAGCATGGAGGATTTCTTACAAGGCCTCCTTGGAACAGCAGTGGGTTTTGGTCATTACGATTCTTCCTTCTTCTTTCCAAATCAACCAGGCTGAGTATGTCGTCGTCAACCTCCTCCTCCGTTTCGATTTCACTTCCTGAAAATCGTGTGGTTCTTGGTGTTGGTATTACGTCTGTTGATTTTTTGGCGGCAGTGGCTTCTTATCCAAATCCTGACGACAAAATTCGAACCACAAGCTTAAAGGTACAAGGTGGAGGAAATGTAGGTAATGCTTTAACTTCTGCGGCTCGGTTGGGTTTAACACCAAGGATAATTTCCAAGGTTGCAGATGATACTCAAGGAAGGAGCATAATGGAGGAGCTAGAAGCTGATGGCATAGATACATCATTTCTTGTAGTTTCTGAAGGGGGTATTTCATCATTTTCCTATATTATTGTGGATAATAAAACGCACACTCGTACATGCATCCTCACCCCAGGATCTCCTCCGATGGTGCCAGATGACCTTTCACGATCAAGCTTGCTGTCTGCTTTAAACGGGGCTAGAATTGTATATTCTGACGTAGGATTGCATGAAATTGCTTTGCTTGTTGCACGAGAGGCAGCTCGGCAGAATATACCTATGTTGATCGATGCTGAAAGGAAAAAGGAAGGTGTGGATGATCTCCTGGCATTTGCTAGTTATGTAGTCTGCTCAACAAAATTTCCACAGGAATGGACTGAGGCACCATCGATTCCATCTGCACTTCTTTCCATGCTTCTGCGATATCCAAAACTCAGATTTGTGATTGTCACCTTGGGTGAAAATGGATGCATAATGCTCGAAAGAAATATTGATGAAACACCTGATCAAATGGAAGACTTTGAAGTAGACAACTTACTTGAAGTGGTCAAGAGCAGAAGGGATGAGAATATAAATGTTCCAACTTTTGTTTCATCGCCAGTGGCCAAGTTGAGAGCTGAGGGGATAGGGACAGTTTGTGGCAGGCTGTTGCTCGGGACAGCTGAAAAAATACCGGAGTCCGAGATTGTTGATACGACCGGTGCTGGAGATGCATTCGTTGGAGCAGTTCTTTATGCCTTATGTGCCAACATGCAACCAGAGAACTTATTGCCATTTTCTGCTCAAGTGGTTTTGCGGCCACAAACTTGGGGAAAACAAGTTCTAATGCCAGATTTGATGCTTTCTTCTGATGAACCAGCTATTATGAGTGGTCATGGTCGATTGAAGGACTCATCCATTAATAAAATACTAGTGAAGCGTCATCACGTCGGCGCCGGTTCTCCTTACTCCATAAACAAAGATGATGCCATTGCCGGCTCTCCTTCCAAGCAATACGCTTCTTCATTCTTCTCCAACCTTCCTTCTCTTCTCCAAATCAACCAGCCATTTCTTTCTGCATATTCTGATTTCAGGCCCAGAATGTCCTCGTCAACCTCCTCCTCGCTTCCGATTTCACTTCCTGAAAATCGTGTGGTTCTTGGTGTTGGTGCTACTTCTGTTGATTTTTTGGCGGCAGTGGCTTCTTATCCAAATCCTGACGACAAAATTAGAACCACAAGCTTAAAGGTACAAGGTGGAGGAAATGTAGGGAATGCTTTAACTTCTGCAGCTCGGTTGGGTTTAACACCAAGGATAATTTCCAAGGTTGCAGATGATAGTCAGGGAAGGAGCATAATTGAGGAGCTAGAAGCTGATGGCGTAGATACATCCTTTCTTGTAGTTTCTGAAGGGGGTACTTCACCATTTACCTATATTATTGTGGATAATAAAACGCACACTCGTACATGTATCCACACCCCAGGATCTCCTCCCATGGTGCCAGATGACCTTTCGCGATCAAGCTTGCTGTCTGCATTAGATGGGGCTAGATTTGTATATTTTGACGTAAGATTGCATGAAACTGCTTTGCTTGTTGCACAAGAGGCAGCTCGGCAGAATATACCTATGTTGATCGATGCAGAAAGGAAAAGGGAAGGTCTCGATGATCTCCTGGCATTTGCCAGTTATGTTGTCTGCTCAACAAGATTTCCACAGGAATGGACAGAGGCACCATCGATTCCATCTGCACTTGTTTCCATGCTTCTGCGACTTCCAAAACTCAAATTCGTGATTGTCACATTGGGTGAAAATGGATGCATAATGCTCGAAAGAAGTACCAATGAAACATCTGATCAGATGGAAGAGTTTGAAGTAGACAGCTTACTTGAAATCGTCAAGAGCAGAAGGGATGAAAATATTAATGCTCCAACTTCCGTATCATCGCCAGTGGCCAAGTTGAGAGCTGAGGGGATAGGGACAGTTTGTGGCAGGCTGTTGCTTGGGACAGCTGAAAAAATACCAGTGTCTGAGATTGTTGATACAACTGGTGCTGGAGATGCGTTCATTGGAGCAGTTCTTTATGCCTTATGTGCCAACATGCCACCAGAGAAGCTATTGCCATTTTCCGCTCAAGTGGCTGCTGGATGTTGTCGTGCTTTGGGTGCACGAAGCGGTCTTCCATATCGTACGGATCCACGGCTGGCATCTTTCTTACATTAG | 4812 | 44.87 | MPFSTLHLLLVLHAFDLLFSCSGQSSVSPHIYLSPSLQPNLQTMTTEMSTEHARLESISFSFVPSKLRGNWIFKSSLGPSTAPAPSPGPRSAPLPIRHHRRRRGRPHVVAPTPSKDQGCDQICMEPLTAAPFGSPCGCVFPMKVRLLLDIAPYAVFPVMNELESEIAVGTYLEQSQVKIMGATADSQNQGRTMVDINLVPLGEKFDNTTAVLTYRRFWDKKVHLNMTLFGDYEVVYISYPGIPSSPPYGGYMGSAPSGSAGDLPITANFVNKSQKMNVKTIAIIALSAFVVLLVFIGALSIFFKWRKVGRPSSAVGPVFTSSINKRSGLGSALSSSIASSTSVSLISTMPTSLQSVKTFALSELEKATDKFSSKRILGEGGFGRVYCGILEDGNEVAVKLLTRDNQNRDREFIAEVEMLSRLHHRNLVKLIGICIEGRTRCLVYELVHNGSVESHLHGIDKRKGPLDWDARLKIALGAARGLAYLHEDSNPRVIHRDFKASNVLLEVDFTPKVSDFGLAREATEGSEHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLSGRKPVDMSQPHGEENLVTWARPLLTSREGLEQLVDPSLAGTYDFDDMAKVAAIASMCVHPEVTQRPFMGEVVQALKLIYNDTDETCADYCSQKESSARDSDFKGDLVPSDSSWWNAGGLTPRLTYGQASSFITMEYSSGPLEEMENRPFSTSSLVGDEISLPIRHGNRSGPLRTARSKPAFYRFSGSRSEHGGFLTRPPWNSSGFWSLRFFLLLSKSTRLSMSSSTSSSVSISLPENRVVLGVGITSVDFLAAVASYPNPDDKIRTTSLKVQGGGNVGNALTSAARLGLTPRIISKVADDTQGRSIMEELEADGIDTSFLVVSEGGISSFSYIIVDNKTHTRTCILTPGSPPMVPDDLSRSSLLSALNGARIVYSDVGLHEIALLVAREAARQNIPMLIDAERKKEGVDDLLAFASYVVCSTKFPQEWTEAPSIPSALLSMLLRYPKLRFVIVTLGENGCIMLERNIDETPDQMEDFEVDNLLEVVKSRRDENINVPTFVSSPVAKLRAEGIGTVCGRLLLGTAEKIPESEIVDTTGAGDAFVGAVLYALCANMQPENLLPFSAQVVLRPQTWGKQVLMPDLMLSSDEPAIMSGHGRLKDSSINKILVKRHHVGAGSPYSINKDDAIAGSPSKQYASSFFSNLPSLLQINQPFLSAYSDFRPRMSSSTSSSLPISLPENRVVLGVGATSVDFLAAVASYPNPDDKIRTTSLKVQGGGNVGNALTSAARLGLTPRIISKVADDSQGRSIIEELEADGVDTSFLVVSEGGTSPFTYIIVDNKTHTRTCIHTPGSPPMVPDDLSRSSLLSALDGARFVYFDVRLHETALLVAQEAARQNIPMLIDAERKREGLDDLLAFASYVVCSTRFPQEWTEAPSIPSALVSMLLRLPKLKFVIVTLGENGCIMLERSTNETSDQMEEFEVDSLLEIVKSRRDENINAPTSVSSPVAKLRAEGIGTVCGRLLLGTAEKIPVSEIVDTTGAGDAFIGAVLYALCANMPPEKLLPFSAQVAAGCCRALGARSGLPYRTDPRLASFLH | 1603 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 2886403 | 2908286 | + | CrPI670011_07g005110.1 | Cre07g0511 | 503092 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cre07g0511 | 1603 | CDD | ribokinase_group_B | 1249 | 1592 | - | - | |
Cre07g0511 | 1603 | Gene3D | - | 807 | 1135 | IPR029056 | - | |
Cre07g0511 | 1603 | CDD | STKc_IRAK | 377 | 646 | - | - | |
Cre07g0511 | 1603 | ProSitePatterns | pfkB family of carbohydrate kinases signature 2. | 1102 | 1115 | IPR002173 | GO:0016301(InterPro) | |
Cre07g0511 | 1603 | CDD | ribokinase_group_B | 807 | 1134 | - | - | |
Cre07g0511 | 1603 | SUPERFAMILY | Ribokinase-like | 808 | 1131 | IPR029056 | - | |
Cre07g0511 | 1603 | PRINTS | Ribokinase signature | 1252 | 1273 | IPR002139 | GO:0016301(InterPro) | |
Cre07g0511 | 1603 | PRINTS | Ribokinase signature | 1461 | 1472 | IPR002139 | GO:0016301(InterPro) | |
Cre07g0511 | 1603 | PRINTS | Ribokinase signature | 1279 | 1298 | IPR002139 | GO:0016301(InterPro) | |
Cre07g0511 | 1603 | PANTHER | PHOSPHOTRANSFERASE SYSTEM TRANSPORT PROTEIN | 1240 | 1602 | IPR052562 | - | |
Cre07g0511 | 1603 | ProSitePatterns | pfkB family of carbohydrate kinases signature 2. | 1544 | 1557 | IPR002173 | GO:0016301(InterPro) | |
Cre07g0511 | 1603 | ProSitePatterns | Protein kinases ATP-binding region signature. | 377 | 399 | IPR017441 | GO:0005524(InterPro) | |
Cre07g0511 | 1603 | Gene3D | Phosphorylase Kinase; domain 1 | 343 | 446 | - | - | |
Cre07g0511 | 1603 | MobiDBLite | consensus disorder prediction | 79 | 115 | - | - | |
Cre07g0511 | 1603 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 493 | 505 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cre07g0511 | 1603 | MobiDBLite | consensus disorder prediction | 94 | 108 | - | - | |
Cre07g0511 | 1603 | Pfam | pfkB family carbohydrate kinase | 811 | 1032 | IPR011611 | - | |
Cre07g0511 | 1603 | Pfam | pfkB family carbohydrate kinase | 1093 | 1130 | IPR011611 | - | |
Cre07g0511 | 1603 | Pfam | pfkB family carbohydrate kinase | 1253 | 1477 | IPR011611 | - | |
Cre07g0511 | 1603 | Pfam | pfkB family carbohydrate kinase | 1535 | 1591 | IPR011611 | - | |
Cre07g0511 | 1603 | FunFam | receptor-like serine/threonine-protein kinase ALE2 | 344 | 446 | - | - | |
Cre07g0511 | 1603 | FunFam | Receptor-like serine/threonine-protein kinase ALE2 | 447 | 663 | - | - | |
Cre07g0511 | 1603 | Pfam | Protein tyrosine and serine/threonine kinase | 374 | 642 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cre07g0511 | 1603 | Gene3D | - | 1249 | 1588 | IPR029056 | - | |
Cre07g0511 | 1603 | SUPERFAMILY | Protein kinase-like (PK-like) | 355 | 649 | IPR011009 | - | |
Cre07g0511 | 1603 | Gene3D | Transferase(Phosphotransferase) domain 1 | 447 | 669 | - | - | |
Cre07g0511 | 1603 | ProSiteProfiles | Protein kinase domain profile. | 371 | 646 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cre07g0511 | 1603 | SUPERFAMILY | Ribokinase-like | 1250 | 1594 | IPR029056 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cre03g1947 | Cre-Chr3:36529118 | Cre07g0511 | Cre-Chr7:2886403 | 7.70E-84 | dispersed | |
Cre07g0511 | Cre-Chr7:2886403 | Cre09g0060 | Cre-Chr9:870886 | 8.20E-171 | dispersed | |
Cre09g0304 | Cre-Chr9:2962938 | Cre07g0511 | Cre-Chr7:2886403 | 4.10E-70 | dispersed | |
Cre09g2234 | Cre-Chr9:41515721 | Cre07g0511 | Cre-Chr7:2886403 | 2.60E-35 | dispersed | |
Cre07g0511 | Cre-Chr7:2886403 | Cre03g1825 | Cre-Chr3:35163419 | 4.80E-179 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
64251 | PF07714 | PK_Tyr_Ser-Thr | 7.70E-46 | CL0016 | Cre | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cre07g0511 | - | - | - | 0.0 |