Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre07g0511 ATGCCTTTCTCGACTTTGCACCTTCTTTTGGTTCTTCATGCGTTCGATTTGCTTTTCTCTTGCTCAGGACAATCTTCAGTTTCACCACACATATACTTATCTCCTTCCTTACAGCCAAACCTGCAAACAATGACCACGGAAATGTCAACAGAGCATGCAAGGTTGGAGTCTATAAGTTTTTCATTTGTGCCTTCAAAGTTACGTGGTAACTGGATATTTAAGTCTTCTTTGGGACCATCTACTGCTCCTGCACCCTCTCCAGGTCCTAGGAGTGCACCCTTACCCATCCGACATCATCGACGGCGTCGTGGACGACCTCATGTGGTTGCTCCTACCCCATCAAAAGACCAAGGTTGTGATCAAATATGCATGGAGCCCCTTACTGCAGCTCCCTTTGGTTCACCTTGTGGCTGTGTGTTTCCCATGAAAGTCAGACTTCTTCTGGATATAGCTCCATATGCTGTTTTCCCTGTGATGAACGAGCTTGAAAGTGAGATTGCAGTGGGGACTTACTTGGAGCAGAGCCAAGTGAAAATCATGGGTGCAACTGCAGACAGTCAAAATCAAGGAAGAACTATGGTGGACATAAATTTAGTACCTCTAGGAGAGAAGTTTGATAATACAACTGCAGTTCTGACATACAGAAGGTTTTGGGATAAAAAAGTGCATTTAAATATGACGCTTTTTGGTGATTATGAAGTTGTCTACATCAGCTATCCAGGGATTCCTTCTTCCCCGCCATATGGAGGGTACATGGGAAGTGCTCCTAGTGGAAGTGCGGGTGATCTTCCCATTACTGCAAATTTCGTTAATAAGAGCCAGAAGATGAATGTCAAAACAATTGCCATCATAGCACTTTCAGCATTTGTTGTGTTATTAGTGTTCATTGGAGCTCTCTCCATCTTTTTTAAATGGAGAAAAGTTGGCAGACCATCTAGTGCCGTTGGCCCTGTCTTCACGTCATCAATTAACAAAAGATCTGGTCTAGGATCAGCCTTATCAAGTAGCATTGCAAGCTCCACCTCTGTTTCCCTAATTTCCACAATGCCAACCAGTCTTCAATCTGTTAAAACATTTGCACTTTCTGAACTTGAGAAAGCAACAGACAAGTTTAGTTCAAAAAGGATTTTAGGTGAAGGGGGATTTGGCCGAGTTTACTGTGGTATTTTGGAAGATGGAAATGAAGTTGCAGTTAAGTTGCTTACTCGGGACAATCAGAATAGAGACCGTGAATTTATTGCCGAAGTTGAGATGTTGAGTAGACTACATCATCGGAATCTTGTGAAACTGATTGGGATATGCATTGAAGGGCGAACTCGCTGCTTAGTTTATGAGCTTGTCCATAATGGCAGTGTTGAGTCTCACTTGCATGGCATTGACAAGAGAAAAGGACCTCTTGACTGGGACGCACGATTAAAGATTGCTCTTGGAGCAGCAAGAGGTTTGGCATATCTTCATGAAGATTCTAATCCCCGCGTTATTCACCGTGATTTCAAGGCAAGTAATGTTCTGTTGGAAGTTGACTTCACCCCCAAGGTTTCGGATTTTGGATTGGCTAGGGAAGCAACTGAAGGAAGTGAACATATCTCAACACGGGTGATGGGGACTTTCGGGTATGTAGCCCCTGAATATGCAATGACTGGGCACCTGCTCGTCAAAAGTGATGTTTACAGTTATGGAGTCGTGCTACTTGAGCTTCTTTCAGGAAGAAAACCGGTGGACATGTCCCAACCACATGGTGAGGAGAACCTCGTAACGTGGGCGCGACCTCTATTGACCAGTAGAGAAGGTTTGGAGCAACTAGTGGATCCTTCTCTAGCTGGTACTTACGACTTCGATGACATGGCCAAGGTGGCTGCCATAGCTTCAATGTGCGTTCACCCAGAGGTGACCCAGAGGCCATTTATGGGAGAAGTTGTGCAGGCTCTAAAACTAATATACAACGACACAGACGAGACGTGTGCAGATTACTGCAGTCAAAAGGAGTCCTCTGCTCGGGACTCAGATTTCAAAGGCGACCTTGTCCCATCCGACAGCAGTTGGTGGAATGCCGGTGGCCTTACACCCCGACTGACATATGGTCAAGCCTCTTCCTTCATCACCATGGAATACAGCTCTGGCCCTCTTGAAGAGATGGAAAACCGCCCGTTTTCAACTTCAAGTTTGGTAGGTGACGAGATATCTTTGCCTATTCGGCATGGAAACAGGTCAGGTCCGTTACGAACTGCTCGAAGCAAGCCTGCGTTCTATAGATTTTCAGGAAGTAGGAGCGAGCATGGAGGATTTCTTACAAGGCCTCCTTGGAACAGCAGTGGGTTTTGGTCATTACGATTCTTCCTTCTTCTTTCCAAATCAACCAGGCTGAGTATGTCGTCGTCAACCTCCTCCTCCGTTTCGATTTCACTTCCTGAAAATCGTGTGGTTCTTGGTGTTGGTATTACGTCTGTTGATTTTTTGGCGGCAGTGGCTTCTTATCCAAATCCTGACGACAAAATTCGAACCACAAGCTTAAAGGTACAAGGTGGAGGAAATGTAGGTAATGCTTTAACTTCTGCGGCTCGGTTGGGTTTAACACCAAGGATAATTTCCAAGGTTGCAGATGATACTCAAGGAAGGAGCATAATGGAGGAGCTAGAAGCTGATGGCATAGATACATCATTTCTTGTAGTTTCTGAAGGGGGTATTTCATCATTTTCCTATATTATTGTGGATAATAAAACGCACACTCGTACATGCATCCTCACCCCAGGATCTCCTCCGATGGTGCCAGATGACCTTTCACGATCAAGCTTGCTGTCTGCTTTAAACGGGGCTAGAATTGTATATTCTGACGTAGGATTGCATGAAATTGCTTTGCTTGTTGCACGAGAGGCAGCTCGGCAGAATATACCTATGTTGATCGATGCTGAAAGGAAAAAGGAAGGTGTGGATGATCTCCTGGCATTTGCTAGTTATGTAGTCTGCTCAACAAAATTTCCACAGGAATGGACTGAGGCACCATCGATTCCATCTGCACTTCTTTCCATGCTTCTGCGATATCCAAAACTCAGATTTGTGATTGTCACCTTGGGTGAAAATGGATGCATAATGCTCGAAAGAAATATTGATGAAACACCTGATCAAATGGAAGACTTTGAAGTAGACAACTTACTTGAAGTGGTCAAGAGCAGAAGGGATGAGAATATAAATGTTCCAACTTTTGTTTCATCGCCAGTGGCCAAGTTGAGAGCTGAGGGGATAGGGACAGTTTGTGGCAGGCTGTTGCTCGGGACAGCTGAAAAAATACCGGAGTCCGAGATTGTTGATACGACCGGTGCTGGAGATGCATTCGTTGGAGCAGTTCTTTATGCCTTATGTGCCAACATGCAACCAGAGAACTTATTGCCATTTTCTGCTCAAGTGGTTTTGCGGCCACAAACTTGGGGAAAACAAGTTCTAATGCCAGATTTGATGCTTTCTTCTGATGAACCAGCTATTATGAGTGGTCATGGTCGATTGAAGGACTCATCCATTAATAAAATACTAGTGAAGCGTCATCACGTCGGCGCCGGTTCTCCTTACTCCATAAACAAAGATGATGCCATTGCCGGCTCTCCTTCCAAGCAATACGCTTCTTCATTCTTCTCCAACCTTCCTTCTCTTCTCCAAATCAACCAGCCATTTCTTTCTGCATATTCTGATTTCAGGCCCAGAATGTCCTCGTCAACCTCCTCCTCGCTTCCGATTTCACTTCCTGAAAATCGTGTGGTTCTTGGTGTTGGTGCTACTTCTGTTGATTTTTTGGCGGCAGTGGCTTCTTATCCAAATCCTGACGACAAAATTAGAACCACAAGCTTAAAGGTACAAGGTGGAGGAAATGTAGGGAATGCTTTAACTTCTGCAGCTCGGTTGGGTTTAACACCAAGGATAATTTCCAAGGTTGCAGATGATAGTCAGGGAAGGAGCATAATTGAGGAGCTAGAAGCTGATGGCGTAGATACATCCTTTCTTGTAGTTTCTGAAGGGGGTACTTCACCATTTACCTATATTATTGTGGATAATAAAACGCACACTCGTACATGTATCCACACCCCAGGATCTCCTCCCATGGTGCCAGATGACCTTTCGCGATCAAGCTTGCTGTCTGCATTAGATGGGGCTAGATTTGTATATTTTGACGTAAGATTGCATGAAACTGCTTTGCTTGTTGCACAAGAGGCAGCTCGGCAGAATATACCTATGTTGATCGATGCAGAAAGGAAAAGGGAAGGTCTCGATGATCTCCTGGCATTTGCCAGTTATGTTGTCTGCTCAACAAGATTTCCACAGGAATGGACAGAGGCACCATCGATTCCATCTGCACTTGTTTCCATGCTTCTGCGACTTCCAAAACTCAAATTCGTGATTGTCACATTGGGTGAAAATGGATGCATAATGCTCGAAAGAAGTACCAATGAAACATCTGATCAGATGGAAGAGTTTGAAGTAGACAGCTTACTTGAAATCGTCAAGAGCAGAAGGGATGAAAATATTAATGCTCCAACTTCCGTATCATCGCCAGTGGCCAAGTTGAGAGCTGAGGGGATAGGGACAGTTTGTGGCAGGCTGTTGCTTGGGACAGCTGAAAAAATACCAGTGTCTGAGATTGTTGATACAACTGGTGCTGGAGATGCGTTCATTGGAGCAGTTCTTTATGCCTTATGTGCCAACATGCCACCAGAGAAGCTATTGCCATTTTCCGCTCAAGTGGCTGCTGGATGTTGTCGTGCTTTGGGTGCACGAAGCGGTCTTCCATATCGTACGGATCCACGGCTGGCATCTTTCTTACATTAG 4812 44.87 MPFSTLHLLLVLHAFDLLFSCSGQSSVSPHIYLSPSLQPNLQTMTTEMSTEHARLESISFSFVPSKLRGNWIFKSSLGPSTAPAPSPGPRSAPLPIRHHRRRRGRPHVVAPTPSKDQGCDQICMEPLTAAPFGSPCGCVFPMKVRLLLDIAPYAVFPVMNELESEIAVGTYLEQSQVKIMGATADSQNQGRTMVDINLVPLGEKFDNTTAVLTYRRFWDKKVHLNMTLFGDYEVVYISYPGIPSSPPYGGYMGSAPSGSAGDLPITANFVNKSQKMNVKTIAIIALSAFVVLLVFIGALSIFFKWRKVGRPSSAVGPVFTSSINKRSGLGSALSSSIASSTSVSLISTMPTSLQSVKTFALSELEKATDKFSSKRILGEGGFGRVYCGILEDGNEVAVKLLTRDNQNRDREFIAEVEMLSRLHHRNLVKLIGICIEGRTRCLVYELVHNGSVESHLHGIDKRKGPLDWDARLKIALGAARGLAYLHEDSNPRVIHRDFKASNVLLEVDFTPKVSDFGLAREATEGSEHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLSGRKPVDMSQPHGEENLVTWARPLLTSREGLEQLVDPSLAGTYDFDDMAKVAAIASMCVHPEVTQRPFMGEVVQALKLIYNDTDETCADYCSQKESSARDSDFKGDLVPSDSSWWNAGGLTPRLTYGQASSFITMEYSSGPLEEMENRPFSTSSLVGDEISLPIRHGNRSGPLRTARSKPAFYRFSGSRSEHGGFLTRPPWNSSGFWSLRFFLLLSKSTRLSMSSSTSSSVSISLPENRVVLGVGITSVDFLAAVASYPNPDDKIRTTSLKVQGGGNVGNALTSAARLGLTPRIISKVADDTQGRSIMEELEADGIDTSFLVVSEGGISSFSYIIVDNKTHTRTCILTPGSPPMVPDDLSRSSLLSALNGARIVYSDVGLHEIALLVAREAARQNIPMLIDAERKKEGVDDLLAFASYVVCSTKFPQEWTEAPSIPSALLSMLLRYPKLRFVIVTLGENGCIMLERNIDETPDQMEDFEVDNLLEVVKSRRDENINVPTFVSSPVAKLRAEGIGTVCGRLLLGTAEKIPESEIVDTTGAGDAFVGAVLYALCANMQPENLLPFSAQVVLRPQTWGKQVLMPDLMLSSDEPAIMSGHGRLKDSSINKILVKRHHVGAGSPYSINKDDAIAGSPSKQYASSFFSNLPSLLQINQPFLSAYSDFRPRMSSSTSSSLPISLPENRVVLGVGATSVDFLAAVASYPNPDDKIRTTSLKVQGGGNVGNALTSAARLGLTPRIISKVADDSQGRSIIEELEADGVDTSFLVVSEGGTSPFTYIIVDNKTHTRTCIHTPGSPPMVPDDLSRSSLLSALDGARFVYFDVRLHETALLVAQEAARQNIPMLIDAERKREGLDDLLAFASYVVCSTRFPQEWTEAPSIPSALVSMLLRLPKLKFVIVTLGENGCIMLERSTNETSDQMEEFEVDSLLEIVKSRRDENINAPTSVSSPVAKLRAEGIGTVCGRLLLGTAEKIPVSEIVDTTGAGDAFIGAVLYALCANMPPEKLLPFSAQVAAGCCRALGARSGLPYRTDPRLASFLH 1603
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 2886403 2908286 + CrPI670011_07g005110.1 Cre07g0511 503092
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre07g0511 1603 CDD ribokinase_group_B 1249 1592 - -
Cre07g0511 1603 Gene3D - 807 1135 IPR029056 -
Cre07g0511 1603 CDD STKc_IRAK 377 646 - -
Cre07g0511 1603 ProSitePatterns pfkB family of carbohydrate kinases signature 2. 1102 1115 IPR002173 GO:0016301(InterPro)
Cre07g0511 1603 CDD ribokinase_group_B 807 1134 - -
Cre07g0511 1603 SUPERFAMILY Ribokinase-like 808 1131 IPR029056 -
Cre07g0511 1603 PRINTS Ribokinase signature 1252 1273 IPR002139 GO:0016301(InterPro)
Cre07g0511 1603 PRINTS Ribokinase signature 1461 1472 IPR002139 GO:0016301(InterPro)
Cre07g0511 1603 PRINTS Ribokinase signature 1279 1298 IPR002139 GO:0016301(InterPro)
Cre07g0511 1603 PANTHER PHOSPHOTRANSFERASE SYSTEM TRANSPORT PROTEIN 1240 1602 IPR052562 -
Cre07g0511 1603 ProSitePatterns pfkB family of carbohydrate kinases signature 2. 1544 1557 IPR002173 GO:0016301(InterPro)
Cre07g0511 1603 ProSitePatterns Protein kinases ATP-binding region signature. 377 399 IPR017441 GO:0005524(InterPro)
Cre07g0511 1603 Gene3D Phosphorylase Kinase; domain 1 343 446 - -
Cre07g0511 1603 MobiDBLite consensus disorder prediction 79 115 - -
Cre07g0511 1603 ProSitePatterns Serine/Threonine protein kinases active-site signature. 493 505 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cre07g0511 1603 MobiDBLite consensus disorder prediction 94 108 - -
Cre07g0511 1603 Pfam pfkB family carbohydrate kinase 811 1032 IPR011611 -
Cre07g0511 1603 Pfam pfkB family carbohydrate kinase 1093 1130 IPR011611 -
Cre07g0511 1603 Pfam pfkB family carbohydrate kinase 1253 1477 IPR011611 -
Cre07g0511 1603 Pfam pfkB family carbohydrate kinase 1535 1591 IPR011611 -
Cre07g0511 1603 FunFam receptor-like serine/threonine-protein kinase ALE2 344 446 - -
Cre07g0511 1603 FunFam Receptor-like serine/threonine-protein kinase ALE2 447 663 - -
Cre07g0511 1603 Pfam Protein tyrosine and serine/threonine kinase 374 642 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cre07g0511 1603 Gene3D - 1249 1588 IPR029056 -
Cre07g0511 1603 SUPERFAMILY Protein kinase-like (PK-like) 355 649 IPR011009 -
Cre07g0511 1603 Gene3D Transferase(Phosphotransferase) domain 1 447 669 - -
Cre07g0511 1603 ProSiteProfiles Protein kinase domain profile. 371 646 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cre07g0511 1603 SUPERFAMILY Ribokinase-like 1250 1594 IPR029056 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre03g1947 Cre-Chr3:36529118 Cre07g0511 Cre-Chr7:2886403 7.70E-84 dispersed
Cre07g0511 Cre-Chr7:2886403 Cre09g0060 Cre-Chr9:870886 8.20E-171 dispersed
Cre09g0304 Cre-Chr9:2962938 Cre07g0511 Cre-Chr7:2886403 4.10E-70 dispersed
Cre09g2234 Cre-Chr9:41515721 Cre07g0511 Cre-Chr7:2886403 2.60E-35 dispersed
Cre07g0511 Cre-Chr7:2886403 Cre03g1825 Cre-Chr3:35163419 4.80E-179 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
64251 PF07714 PK_Tyr_Ser-Thr 7.70E-46 CL0016 Cre PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre07g0511 - - - 0.0