Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre07g0553 ATGGGTGGCCGCACGTTGTTCACTTTGGCTGAGGTTGCCTCCCATGACAATCGCAACGACTGCTGGTTGATCATCGAAGACAAGGTGTATGATGTAACAAAATTCCTTGAAGACCATCCTGGTGGTGATGAAGTCTTGTTGGCAGGCGTTGGTAAGGATGCAACCAATGATTTTTTCGACGTCGGGCACAGTAGTGCTGCTAGAGCAATGATGGAAGAATTTTACGTAGGCGATATTGATAGCTCGACTATTCCTGTGAAAAGGAAGTACAGTCCTCCAAAGCAGCCACTATACAACCAAGACAAGACACCAGAATTCATTATCAAGGTCCTCCAGTTTCTTGCTCCCCTGGTAATTTTGGGCTTGGCTTTTGGCATCCACCTCTATACCAAAACAACTTAA 402 45.77 MGGRTLFTLAEVASHDNRNDCWLIIEDKVYDVTKFLEDHPGGDEVLLAGVGKDATNDFFDVGHSSAARAMMEEFYVGDIDSSTIPVKRKYSPPKQPLYNQDKTPEFIIKVLQFLAPLVILGLAFGIHLYTKTT 133
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 3362635 3364668 - CrPI670011_07g005530.1 Cre07g0553 503134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre07g0553 133 PRINTS Cytochrome B5 signature 54 61 IPR001199 -
Cre07g0553 133 PRINTS Cytochrome B5 signature 67 79 IPR001199 -
Cre07g0553 133 PRINTS Cytochrome B5 signature 29 39 IPR001199 -
Cre07g0553 133 PRINTS Cytochrome B5 signature 39 53 IPR001199 -
Cre07g0553 133 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 4 80 IPR001199 -
Cre07g0553 133 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 35 42 IPR018506 GO:0020037(InterPro)
Cre07g0553 133 FunFam Cytochrome b5 type B 2 84 - -
Cre07g0553 133 SMART Cyt_b5_2 7 80 IPR001199 -
Cre07g0553 133 Gene3D - 3 85 IPR036400 -
Cre07g0553 133 PANTHER CYTOCHROME B5 6 126 IPR050668 GO:0005783(PANTHER)|GO:0016020(PANTHER)|GO:0020037(PANTHER)|GO:0043231(PANTHER)
Cre07g0553 133 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 5 91 IPR036400 -
Cre07g0553 133 Pfam Cytochrome b5-like Heme/Steroid binding domain 8 79 IPR001199 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre07g0553 Cre-Chr7:3362635 Cre09g2485 Cre-Chr9:44142096 1.70E-42 dispersed
Cre11g0703 Cre-Chr11:4117536 Cre07g0553 Cre-Chr7:3362635 1.40E-15 transposed
Cre05g0427 Cre-Chr5:3865275 Cre07g0553 Cre-Chr7:3362635 1.50E-49 wgd
Cre06g1552 Cre-Chr6:10651270 Cre07g0553 Cre-Chr7:3362635 1.30E-48 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre07g0553 K23490 - csv:101212882 259.225