Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre07g0594 ATGTCCCTCCTTAGTAGATTCTTTTACCGAAGACCCCCAGATGGGTTGCTGGAATTTGTTGAACGAGTATATATTTTTGATTCGTGCTTTTCAACTGAAGTATTGCCCGATGGTATGTACCAAATATATCTGCACGAAATCATAAACGAATTACATGAAGAATTCCCGGATTCCTCCTTTCTTGCATTTAATTTTCGTGAAGGGGAGAATAGGAGCCAATTTTCAGAAATGTTGTGCGAGTATGATGTCACTGTGATGGATTATCCTCGACAATACGAAGGTTGCCCTCTTCTTCCATTGTCGTTGATACAGCATTTCCTCCGTGTCTGTGAAAGTTGGCTTCTGCTTGGTAACCAACAAAATGTCATTCTTCTCCACTGTGAGAGGGGAGGTTGGCCACTCTTAGCATTCCTTTTGGCTAGCTTTTTGATATTTAGAAAAATGCAAAGTGGTGAGCGGAAAACTCTTGAAATTGTACATCGAGAAGCTCCCAAAGGGTTTTTGCAGCTCTTGTCACCATTAAATCCATTTCCATCTCAGCTCCGCTACTTGCAGTATGTTGCAAGGAGAAATATAGTCTCTGAGTGGCCACCACCTGAGCGAGCACTCTCTTTAGATTGTGTAATTCTTCGTGGCATTCCGGGTTTTGATTCTCAGAATGGTTGCAGACCGGTCATTCGCATTTTTGGGAGGAATCTTTTTAGTAAGGGTGGGCTCTCCACGCAGATGCTTTTCTCTATGCCTAAGAAGAACAAGCCCCTCCGTCACTACCGTCAGGCAGACTGTGATGTGATTAAAATAGACGTGCAGTGTTTGGTTCAAGGAGATGTAGTGTTGGAGTGTTCACATTTGGAATCGGAACCAGAAAGAGAAGTTATGATGTTTCGTATTATGTTTAATACAGCATTTATTCGATCAAACATACTGATGCTAACCTCTGAAAATTTGGACATTCTTTGGGATTCAAAGGAGCGTTATCCAAAAGGCTTTCGAGCCGAGGTTTTGTTTGGGGAGATGGAAAGCATCTCCCCTCCAAGGGCTCCAACCTCCATTTTGAATGGTGAAGAGAAAGGTGGATTACCAATTGAAGCATTTTCCAAGGTTCAAGAACTTTTTAGTGGTGTCGAGTGGATTGATAGCAACGATGATGCTGCCTTGTGGCTACTTAAGAATCTTTCTGCCTTGAGTGATGTGAAAGAATTGTCAAGATTGCAAAATAAAACAAGTTCATATTCCTCACCAGTTGATTCTGAAGAGGAAAATAATACATCTAGCACTGCCGATAGTTCAGATGAAGTCTTTGATATGATTACAAAGCCTTTTGTTGATTCAACTAATATCAACTTTACAATTCCGGCCATGGTACATTCTTCTGAATTATTGTCTGACAAGATTGGTGCTAATGAAGTGAATATTTCATCAGAGTCTCCTCAATCTTCTGATGAATTTCAAGACAAGATATTTTCAAATAAAGAACCTCTACCCTCTTCATCACCTCCACTAACTTCTTTTGGCTCCCCAGCCCTTCCTACAAGTTCTTCAATGTCATCGCCACTGTTGCCTCCATCTAATCTACCATCTGCCAATGCTAGTGGGGAACTTGTCTCAAATAGAATGGCACCCACTGTTAAAGTGATTCCTCCACCACCGCCGCCACCACCGTTTTCTCTATCACATAATAAACCTCATGTAGAAACTTCCTTTGGTTCAGATTTGACCACTGTGACAATGCATGGGAGACCCCCTCCACCCCCTCCACCTCCACCTCAATATCCTACTAGTAACAATTCTATTACAGCCTCTACTCATTCACTTTCTCATGTTCCTAAATCGTCTGATACTCCTCCACCCCCACCTCCACCTCCTCCTTTTGTTCCAAAATCTTCTAGTGCTCCTCCACCTCCGCCTCCACCTCCAATTCCAAAATCTTCTAGTGCTCCCCTGCCTCCGCCCCTGGTTCCAAAATCTTTTGGTGCTCCCCCACCTCCACCTCCACCTCCACCTCCACCTGTAGTTCCAAAATCTTTTGGTGCTCCCCCACCTCCACCTCCACCTCCACCTATAGTTCCAAAATCTTCTAGTGCTCCTCCACCTCCGCCTCCACCTCCAGTTTCAAAATCTTCTAATGCTCCTCCACCTCCTCCTCCTCCACCTCCATTTCTAAAGTCATCTAATGCTCCTCCACCTCCGCCTCCGCCACCGCCACCGCCACCGCCTCCGCCACCGCCACCGCCACCGCCTCCGCCTCCGCTTCTAAAATCATCTAGTGCTCCTCCACCTCCACCTCCGCCTCCACCTCCAAAATCTTCTAATGCTCTGCCACCTCCACCTCCACCTTCAATTCCAAAGCTTTCTGGTGCTCCTCCACCTCCACCTCCTCTTCCACAATCAAATCGTGGTGCACCAGCTCCACCTCCTCCACCACCAAAACCTCCCAGTGTTGAGCTGCCAAGTCATGGTGCTAAATCAACTAGACCTCCTCCACCTCCTCCACCAGCAAAGCCCTTCAATGCTCATCCTCCGACGAGCCACGGTGCTACACCAATGCCACCCCCTCCCCCCGGGTCAAGAGGATCAAATGTACCACCACCTCCTCCTCCTTCTGGACGAGGCAAAGCTTCCCTAGGATCAACAACTCAAGGAAGAGGCCGAGTTGCTACAGGAGTTGTAAATGCTCCAAAAAAAACCACTTTAAAACCATTACACTGGGTAAAAGTTACTCGAGCAATGCAAGGGAGTTTATGGGCTGACTCACAAAAGCAGGAAAATCAATCGAGGGCCCCAGAAATAGACATCTCTGAACTTGAAAGTCTATTCTCAGCAGCCTCTGCTTCTGATGGAAGTGGCAGTAAAGGCGGAGGACGACGTGGTTCCAGCATCAACAAACCTGAAAAAGTGCAACTGATTGACCTGCGGAGAGCATATAACTGTGAAATAATGCTCTCAAAAATAAAGATTCCCTTACCGGATATGATAAATTCAGTTCTTGCATTGGATTCTTCTGCTCTTGATATTGACCAGGTTGAGAATCTCATCAAGTTTTGTCCTACTAGGGAAGAGATGGAAACGTTGAAGAGTTATACAGGTGACAGAGAAATGCTTGGAAAGTGTGAGCAGTTTTTTCTCGAGCTAATGAAGGTCCCACGGATAGAGCCCAAGTTACGAGTATTTGCTTTCAAAATCACCTTTTCTAGTCAGGTGAATGATTTGAGATATCATTTGAACACAATAAATGATGCTACAAGAGAGGTCAAAGAATCTGCCAAATTGCGTCAGATAATGCAAACGATTCTTACACTGGGAAATGCGTTAAACCAGGGTACTGCTCGAGGCTCAGCTATAGGTTTTAAGTTGGACAGCCTCCTTAAATTGTCTGACACTCGGGCAAGAAACAACAAAATGACTTTGATGCATTATTTATGTAAGCTCATTGCAGAGAAAATGCCAGAGTTACTTGATTTTGACAAGGACCTCGTTCATTTAGAAGCTGCCTCTAAGATTCAATTGAAAGCATTGGCTGAGGAAATGCAAGCAGTGAGTAAAGGTCTTGAAAAGGTGGAGCAAGAGCTAACCGCTTCAGAAAATGACGGTGCCATCTCTGTTGGTTTCCAGAAGGTGCTGAAGAATTTTCTTGATACGGCTGAAGCTGAAGTAAGGGCACTTATCTCTTTATATTCTGAAGTGGGGAGAAACGCTGATTCACTATCCCAGTACTTTGGCGAGGATCCAGCTCGGTGCCCCTTTGAGCAAGTTACTCAAATTTTAATAGTCTTCGTTAAGATGTTCAAGAAGTCACGAGAAGAAAATGAAAGGCAGGCCGATGCTGATAAGAGAAAAACAGAGAAGGAAGCCATGAAAGAACGAAGTTCGGTTAAAGCAAAGTTGGCTCTTTGCCTTCCTGTACAGCCATTTCTTTCATCAATATCGTGGCTTGTAAATACGACGCGACGCAATTACAGGCTCGGGGAGTGGTTGCCATTTGACAATAGAGGTTCGAGTGTTCTGTTGATCTCAACTTGA 4020 44.85 MSLLSRFFYRRPPDGLLEFVERVYIFDSCFSTEVLPDGMYQIYLHEIINELHEEFPDSSFLAFNFREGENRSQFSEMLCEYDVTVMDYPRQYEGCPLLPLSLIQHFLRVCESWLLLGNQQNVILLHCERGGWPLLAFLLASFLIFRKMQSGERKTLEIVHREAPKGFLQLLSPLNPFPSQLRYLQYVARRNIVSEWPPPERALSLDCVILRGIPGFDSQNGCRPVIRIFGRNLFSKGGLSTQMLFSMPKKNKPLRHYRQADCDVIKIDVQCLVQGDVVLECSHLESEPEREVMMFRIMFNTAFIRSNILMLTSENLDILWDSKERYPKGFRAEVLFGEMESISPPRAPTSILNGEEKGGLPIEAFSKVQELFSGVEWIDSNDDAALWLLKNLSALSDVKELSRLQNKTSSYSSPVDSEEENNTSSTADSSDEVFDMITKPFVDSTNINFTIPAMVHSSELLSDKIGANEVNISSESPQSSDEFQDKIFSNKEPLPSSSPPLTSFGSPALPTSSSMSSPLLPPSNLPSANASGELVSNRMAPTVKVIPPPPPPPPFSLSHNKPHVETSFGSDLTTVTMHGRPPPPPPPPPQYPTSNNSITASTHSLSHVPKSSDTPPPPPPPPPFVPKSSSAPPPPPPPPIPKSSSAPLPPPLVPKSFGAPPPPPPPPPPPVVPKSFGAPPPPPPPPPIVPKSSSAPPPPPPPPVSKSSNAPPPPPPPPPFLKSSNAPPPPPPPPPPPPPPPPPPPPPPPPLLKSSSAPPPPPPPPPPKSSNALPPPPPPSIPKLSGAPPPPPPLPQSNRGAPAPPPPPPKPPSVELPSHGAKSTRPPPPPPPAKPFNAHPPTSHGATPMPPPPPGSRGSNVPPPPPPSGRGKASLGSTTQGRGRVATGVVNAPKKTTLKPLHWVKVTRAMQGSLWADSQKQENQSRAPEIDISELESLFSAASASDGSGSKGGGRRGSSINKPEKVQLIDLRRAYNCEIMLSKIKIPLPDMINSVLALDSSALDIDQVENLIKFCPTREEMETLKSYTGDREMLGKCEQFFLELMKVPRIEPKLRVFAFKITFSSQVNDLRYHLNTINDATREVKESAKLRQIMQTILTLGNALNQGTARGSAIGFKLDSLLKLSDTRARNNKMTLMHYLCKLIAEKMPELLDFDKDLVHLEAASKIQLKALAEEMQAVSKGLEKVEQELTASENDGAISVGFQKVLKNFLDTAEAEVRALISLYSEVGRNADSLSQYFGEDPARCPFEQVTQILIVFVKMFKKSREENERQADADKRKTEKEAMKERSSVKAKLALCLPVQPFLSSISWLVNTTRRNYRLGEWLPFDNRGSSVLLIST 1339
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 3745089 3756112 + CrPI670011_07g005940.1 Cre07g0594 503175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre07g0594 1339 ProSiteProfiles Formin homology-2 (FH2) domain profile. 888 1288 IPR015425 -
Cre07g0594 1339 MobiDBLite consensus disorder prediction 611 815 - -
Cre07g0594 1339 Gene3D Protein tyrosine phosphatase superfamily 16 191 IPR029021 -
Cre07g0594 1339 MobiDBLite consensus disorder prediction 489 893 - -
Cre07g0594 1339 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 200 339 IPR035892 -
Cre07g0594 1339 MobiDBLite consensus disorder prediction 578 593 - -
Cre07g0594 1339 MobiDBLite consensus disorder prediction 560 574 - -
Cre07g0594 1339 MobiDBLite consensus disorder prediction 942 961 - -
Cre07g0594 1339 MobiDBLite consensus disorder prediction 543 558 - -
Cre07g0594 1339 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 19 187 IPR029021 -
Cre07g0594 1339 MobiDBLite consensus disorder prediction 594 610 - -
Cre07g0594 1339 SUPERFAMILY Formin homology 2 domain (FH2 domain) 901 1281 - -
Cre07g0594 1339 FunFam Formin-like protein 887 1274 - -
Cre07g0594 1339 Gene3D Formin, FH2 domain 890 1274 IPR042201 -
Cre07g0594 1339 Gene3D - 197 342 - -
Cre07g0594 1339 ProSiteProfiles C2 tensin-type domain profile. 200 339 IPR014020 -
Cre07g0594 1339 MobiDBLite consensus disorder prediction 822 870 - -
Cre07g0594 1339 Pfam Formin Homology 2 Domain 893 1263 IPR015425 -
Cre07g0594 1339 SMART PTEN_C2_2 198 338 IPR014020 -
Cre07g0594 1339 Pfam C2 domain of PTEN tumour-suppressor protein 198 338 IPR014020 -
Cre07g0594 1339 MobiDBLite consensus disorder prediction 489 536 - -
Cre07g0594 1339 MobiDBLite consensus disorder prediction 406 431 - -
Cre07g0594 1339 Coils Coil 1169 1196 - -
Cre07g0594 1339 SMART it6_source 515 1323 IPR015425 -
Cre07g0594 1339 PANTHER FORMIN-J 787 1286 IPR051144 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre06g2103 Cre-Chr6:28833198 Cre07g0594 Cre-Chr7:3745089 1.80E-253 dispersed
Cre06g2459 Cre-Chr6:32402265 Cre07g0594 Cre-Chr7:3745089 4.50E-199 dispersed
Cre07g0594 Cre-Chr7:3745089 Cre05g1800 Cre-Chr5:29989797 1.80E-259 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre07g0594 K28090 - csv:101217517 1055.05