Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre07g0601 ATGTTTAATTCCTTATGCTTCTTCTTCTTCATTCTATTAGTTCACTGTAAATCTTCTGAAATTGCTGGAGGTGGTCGTAGATTGCTTCATCAACCATTTTTCCCACTTGATTCTGTTCCTCCGGCGGAGCCGCCGTCGACTCCGGTACCACCGCCACCGAATCCCAAGTACCCATTTTCCACTACCCCTCCTACTAATCCTGATGGGTCTCCATTTTTTCCGACGTATCCTGGAACCCCACCTCCTCCGGCGCCGGCGAGTTTCGCATCGTTTCCGGCTAATATTTCTTCTCTGATTCTACCTCATTCGTCTCAGTCTGGTTCAGCTTCTAAGAAGGTTGTTTCGTTGGTTGTTGCTGGGGTTGTTTCCGTTGTCTTGGTTGTCTGCATTGCTGGGTTTTTGTACTGGCGGAGACGGCGTGGTCGTGGGTTGGGCGATGACAAGACGTACAGATCCGAAAATAGTAGCCGGTTGTGTCCGGTTCCGAATGTTGAAGTCGGTAATGGAATCCCTAAGTTGAGACATCCCTCTGCTACTAGCTCTGAGTTTCTGTATTTGGGTACTCTTGTGAACTCGAGAGCGATCGATGAGCGTTCCGTTGGGGGAGCTCGTGTTGCTGATCCTAGGTCGTTGGATTCGCCGGAGCTTCATCCGCTTCCGCCGTTGAATTTTGGTCGGTCGAGTGAGAAGCAAAATTGTGGAAATGGAGAGGAGAGATCGATGGGAGATGAGGAGGAAGAGGAATTTTACTCTCCTAAAGGTTCTCTCGGCGCAATTGGTTCGGGATCTCGAAGAGTGCTCGCAACAATGGCGGCTGAAGATTTGCTTGGCAAAACCAGCGATTCGAGCACTACTTCGTATTCCACATCCAGCGGTTCCGTTTCGCCGGCGAGATCACGTTCTAAGAGTCTCTCTCTATCTCCACCGGCGAGTTTGAGCCCAAGAAGATCCGTTCAAAATGAATCTTCTAATTTCTCTGTTTCTGCCACTGTAGCGACGGAGCAAAATTCACCGCCATTGACGCCGCCGCTTTCCCACGCCGGGGTGGAATCAGACGACGGCGTTAAATCCCATTGCCCATCTCCAATGCGTTTATCGACGGATAAAGTTCCAGAGAAAAGCTCCACCGCATCTTCATCCCGGAGGTATTCTAATGTTTCAGTTCACAGTGTGATGTTCCCAATTTCAACAACCGCTAAGGATTTAGTTAATCATGACGATACGAGCAATAATCACGAAGAATCTCCAAGACAATCCCATAATTCAGATCCAGACGAGCCGTTTCCATTTTCTCCTTGTTTATTTCCTCTTTCAGATGGAATTTTAGGGCAAATTCAGATTCAATTGCCCACGGTTTCAAACATTCCCGATTCCGATTCTGAAGCAAAACTTAAGCAACTTCCTTACTCCTTTACTTCATCTTCACCTTCATCGTCGCCGGAGAGAGTAGTTATGGACTCATCTCCGTCAAGAACATCCATTATTTCAGATCAAAACAGGTCTTCTCCACCATCACCAGAGAGAATTGTGTTTAGTGATTCAGATTCATCAAAGAGAACTCTAGACCATTTTGATCAAGATGTGAAATCTTCTTCTGCTGACATCAATACCACTGATGTGGGTCCGCTGCAATCTCCTTCTACCGCTCCTCCGCCACCTCCCCCACCTCCCCCCCCGCCCCCGCCTCCCCCACCACCCCCGCCACCGGTAGCCCCTCTGCCAGAACGCTGGGAAATGCCCATTTCTCCTTCTACACCAATGGACCAATCCATTCCAAAGGCGCCTCCTCCATTAGTGCCTCCATTAAGGCCATTTATGATGGAGAATGTGAAAAATGTCTCACCAATTCAGTTGCCATCCTGCAAAAGCAATGGCGAATCATCTGAAGACACCCCCAAGCCCAAGTTGAAGCCATTGCATTGGGACAAAGTAAGGGCCAGTTCTGATCGTGAGATGGTGTGGGATCAACTCAGATCAAGCTCTTTTAAAGTGAATGAGGAAATGATTGAAACTCTGTTTGTTGTGAACACTTCCAACTCAAAGGAGACAACTCCACGCACCGTGCTTCCTCCACCTAACCAAGAGATCGGAGTTCTCGATCCCAAAAAGTCGCAGAACATTGCAATTGCGTTACGGGCGCTTAATGTGACCATAGAAGAAGTTTGTGATGCCCTTTTAGAAGGTAATGCAGATGCACTTGGAGCAGAGCTACTTGAAAGTTTATTGAAGATGGCTCCAACAAAAGAAGAAGAACGTAAACTAAAGGCATCCAAGGATGTCTCACCTACAAAGTTTGGCCCTGCTGAGAAATTTTTGAAGGCAGTCCTTGATGTTCCTTTTGCATTTAAAAGGGTGGATGCAATGCTTTACATAGCAAATTTCGAGTCCGAGATTGAGTACCTAAAGAAATCATTCGAAAATCTTGAGACTGCTTGCGAGGAATTGAGGAATAGCAGGATGTTCTTGAAACTTTTGGAAGCTGTGCTCAAGACCGGGAATCGGATGAATGTTGGCACCAACCGCGGTGATGCCCATGCCTTCAAACTTGACACACTTTTGAAGCTTGTTGATGTCAAGGGTGCAGATGGAAAAACCACTCTTCTGCATTTTGTTGTACAAGAAATCATAAGAAGTGAAGGAGCTCGTCTTTGTGTCACGAGTCAAATTCCGAACTCCAACCCGAGTGATGATGCCAAATGCAGGAAACTCGGCCTGCAAGTTGTATCGGGTCTCAGCTCGGAGCTTGCCAACGTAAAGAAGGCAGCTTCAATGGATTCCGATGTGCTCAGTGGCGAGGTCATCAAGCTTTCGAGAGGACTCGACAACATCAGAGAGGCTCTACGTCTAAACGAAGCAGACGGGCCAAACGAAAGCACAGAAAAGTTCTCAGAGTCAATGAGTAGATTCTTGAAAATGGCAGAAGAGGATATCATCAGAGTCCAAGCCCATGAAAGTGTTGCTTTATCTCTAGTAAAGGAGATCACAGAGTACTTCCATGGCAACTCTGCCAAAGAAGAAGCTCATCCATTTAGAATTTTCATGGTGGTGAGAGATTTCCTAACAATTCTTGATGGAGTCTGCAAAGAAGTCGGAATGATAAATGAGCGGACGATTGTAAGTTCTGCCCATAAATTTCCAGTTCCAGTGAATCCAACATTACCACAAGCATTTCAAGCTCTTCATAGAGTGCAGAAATACAATTCTTCTGATGAAGAAAGTGAACAATCCCCATAA 3234 46.6 MFNSLCFFFFILLVHCKSSEIAGGGRRLLHQPFFPLDSVPPAEPPSTPVPPPPNPKYPFSTTPPTNPDGSPFFPTYPGTPPPPAPASFASFPANISSLILPHSSQSGSASKKVVSLVVAGVVSVVLVVCIAGFLYWRRRRGRGLGDDKTYRSENSSRLCPVPNVEVGNGIPKLRHPSATSSEFLYLGTLVNSRAIDERSVGGARVADPRSLDSPELHPLPPLNFGRSSEKQNCGNGEERSMGDEEEEEFYSPKGSLGAIGSGSRRVLATMAAEDLLGKTSDSSTTSYSTSSGSVSPARSRSKSLSLSPPASLSPRRSVQNESSNFSVSATVATEQNSPPLTPPLSHAGVESDDGVKSHCPSPMRLSTDKVPEKSSTASSSRRYSNVSVHSVMFPISTTAKDLVNHDDTSNNHEESPRQSHNSDPDEPFPFSPCLFPLSDGILGQIQIQLPTVSNIPDSDSEAKLKQLPYSFTSSSPSSSPERVVMDSSPSRTSIISDQNRSSPPSPERIVFSDSDSSKRTLDHFDQDVKSSSADINTTDVGPLQSPSTAPPPPPPPPPPPPPPPPPPPPVAPLPERWEMPISPSTPMDQSIPKAPPPLVPPLRPFMMENVKNVSPIQLPSCKSNGESSEDTPKPKLKPLHWDKVRASSDREMVWDQLRSSSFKVNEEMIETLFVVNTSNSKETTPRTVLPPPNQEIGVLDPKKSQNIAIALRALNVTIEEVCDALLEGNADALGAELLESLLKMAPTKEEERKLKASKDVSPTKFGPAEKFLKAVLDVPFAFKRVDAMLYIANFESEIEYLKKSFENLETACEELRNSRMFLKLLEAVLKTGNRMNVGTNRGDAHAFKLDTLLKLVDVKGADGKTTLLHFVVQEIIRSEGARLCVTSQIPNSNPSDDAKCRKLGLQVVSGLSSELANVKKAASMDSDVLSGEVIKLSRGLDNIREALRLNEADGPNESTEKFSESMSRFLKMAEEDIIRVQAHESVALSLVKEITEYFHGNSAKEEAHPFRIFMVVRDFLTILDGVCKEVGMINERTIVSSAHKFPVPVNPTLPQAFQALHRVQKYNSSDEESEQSP 1077
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 3841222 3845611 + CrPI670011_07g006010.1 Cre07g0601 503182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre07g0601 1077 MobiDBLite consensus disorder prediction 278 342 - -
Cre07g0601 1077 Pfam Formin Homology 2 Domain 628 1023 IPR015425 -
Cre07g0601 1077 MobiDBLite consensus disorder prediction 405 421 - -
Cre07g0601 1077 MobiDBLite consensus disorder prediction 469 598 - -
Cre07g0601 1077 MobiDBLite consensus disorder prediction 530 544 - -
Cre07g0601 1077 PANTHER FORMIN-RELATED 426 1071 IPR027643 GO:0003779(InterPro)|GO:0030036(InterPro)|GO:0045010(InterPro)|GO:0051015(InterPro)
Cre07g0601 1077 MobiDBLite consensus disorder prediction 512 529 - -
Cre07g0601 1077 MobiDBLite consensus disorder prediction 40 70 - -
Cre07g0601 1077 MobiDBLite consensus disorder prediction 469 511 - -
Cre07g0601 1077 SUPERFAMILY Formin homology 2 domain (FH2 domain) 559 1034 - -
Cre07g0601 1077 SMART it6_source 626 1038 IPR015425 -
Cre07g0601 1077 MobiDBLite consensus disorder prediction 616 637 - -
Cre07g0601 1077 MobiDBLite consensus disorder prediction 198 256 - -
Cre07g0601 1077 MobiDBLite consensus disorder prediction 278 383 - -
Cre07g0601 1077 Coils Coil 791 818 - -
Cre07g0601 1077 MobiDBLite consensus disorder prediction 402 430 - -
Cre07g0601 1077 ProSiteProfiles Formin homology-2 (FH2) domain profile. 626 1049 IPR015425 -
Cre07g0601 1077 Gene3D Formin, FH2 domain 631 1044 IPR042201 -
Cre07g0601 1077 MobiDBLite consensus disorder prediction 545 576 - -
Cre07g0601 1077 MobiDBLite consensus disorder prediction 368 383 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre02g1531 Cre-Chr2:27636147 Cre07g0601 Cre-Chr7:3841222 2.00E-145 dispersed
Cre05g1650 Cre-Chr5:27306911 Cre07g0601 Cre-Chr7:3841222 9.60E-102 dispersed
Cre07g0601 Cre-Chr7:3841222 Cre11g0591 Cre-Chr11:3007334 4.10E-166 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre07g0601 K28090 - csv:101211678 1685.62