Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cre07g0608 | ATGACCACCGGAAGGGAAATTCTCCACAAGATGAAGGTGAAGGCAGGGTTTTGTTCATCAGCAGCTGATACAGGGAAAGGCAAAGGCAAAGGCAAATTGACGACAAATAATAATAATAATAATAATAATAATAATAAGAATAAGAATATAAGCCATGGGAGTTATTTGGTGAAGGGAAAAGGCAACCATCCAATGGAAGATTACTTGGTTTCCGATTTCAAGCGAGTCAAAGAACATGATTTGGGTTTGTTTGCCATTTTCGATGGCCATTTGGGCCACGATGTTGCTAATTTCTTGCAAAATAATCTCTTTCATAACATTCTCAAAGAGGCTGATTTCTGGAGCGAAACAAGAAAAGCCATAAAAAGAGCTTACAAGAAAACAGACGAAGAAATATTGGACAAAGTGAAGCAACTTGGAAAAGGAGGATCAACGGCCGTAACCGCGATCTTGATCGACGGCCACAAACTTGTGGTTGCCAACGTCGGAGATTCTAGAGCTGTTTTGTGCAGAAACGGCGTCGCCGAGCAACTTTCCGTTGACCACGAACCCACCAAAGAGAAAAGAGAAATTGAAAGCCGTGGTGGTTTTGTATCAAATATTCCAGGAGATGTTCCACGTGTCGACGGACAATTGGCGGTGGCCAGAGCATTTGGAGATAAGAGCTTAAAAGTCCACCTCAGCTCAGAACCTGACGTGGAAGTCAAAACGGTGGACGAAACTACAGAGTTCATGATTTTGGCTAGCGATGGCATATGGAAGGTGATGACAAACCAAGAAGCAGTAGAATCAATTAGACATATAAAGGATGCGAACATAGCGGCCAAACGACTTATCGACGAAGCAGTGTCTAGAAAAAGCAAGGACGACATATCGTGCATTGTTGTTAGGTTTCAATGA | 900 | 42.44 | MTTGREILHKMKVKAGFCSSAADTGKGKGKGKLTTNNNNNNNNNNKNKNISHGSYLVKGKGNHPMEDYLVSDFKRVKEHDLGLFAIFDGHLGHDVANFLQNNLFHNILKEADFWSETRKAIKRAYKKTDEEILDKVKQLGKGGSTAVTAILIDGHKLVVANVGDSRAVLCRNGVAEQLSVDHEPTKEKREIESRGGFVSNIPGDVPRVDGQLAVARAFGDKSLKVHLSSEPDVEVKTVDETTEFMILASDGIWKVMTNQEAVESIRHIKDANIAAKRLIDEAVSRKSKDDISCIVVRFQ | 299 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 7 | 3891444 | 3894740 | + | CrPI670011_07g006080.1 | Cre07g0608 | 503189 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cre07g0608 | 299 | SMART | PP2C_SIG_2 | 56 | 298 | IPR001932 | - | |
| Cre07g0608 | 299 | MobiDBLite | consensus disorder prediction | 23 | 54 | - | - | |
| Cre07g0608 | 299 | SMART | PP2C_4 | 41 | 296 | IPR001932 | - | |
| Cre07g0608 | 299 | SUPERFAMILY | PP2C-like | 44 | 298 | IPR036457 | - | |
| Cre07g0608 | 299 | ProSiteProfiles | PPM-type phosphatase domain profile. | 51 | 298 | IPR001932 | - | |
| Cre07g0608 | 299 | MobiDBLite | consensus disorder prediction | 30 | 52 | - | - | |
| Cre07g0608 | 299 | CDD | PP2Cc | 50 | 298 | IPR001932 | - | |
| Cre07g0608 | 299 | FunFam | Probable protein phosphatase 2C 39 | 42 | 299 | - | - | |
| Cre07g0608 | 299 | Gene3D | - | 30 | 299 | IPR036457 | - | |
| Cre07g0608 | 299 | Pfam | Protein phosphatase 2C | 63 | 291 | IPR001932 | - | |
| Cre07g0608 | 299 | PANTHER | PROTEIN PHOSPHATASE | 44 | 296 | IPR015655 | GO:0004722(PANTHER)|GO:0004722(InterPro)|GO:0006470(InterPro)|GO:0035970(PANTHER) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cre04g2125 | Cre-Chr4:38493547 | Cre07g0608 | Cre-Chr7:3891444 | 8.80E-74 | dispersed | |
| Cre07g0608 | Cre-Chr7:3891444 | Cre11g1835 | Cre-Chr11:29988373 | 1.80E-87 | dispersed | |
| Cre03g0380 | Cre-Chr3:2228184 | Cre07g0608 | Cre-Chr7:3891444 | 1.70E-37 | transposed | |
| Cre06g1473 | Cre-Chr6:9297388 | Cre07g0608 | Cre-Chr7:3891444 | 3.80E-28 | transposed | |
| Cre08g0590 | Cre-Chr8:18810273 | Cre07g0608 | Cre-Chr7:3891444 | 1.70E-46 | transposed | |
| Cre08g1703 | Cre-Chr8:29386508 | Cre07g0608 | Cre-Chr7:3891444 | 4.20E-32 | transposed | |
| Cre11g1291 | Cre-Chr11:11882183 | Cre07g0608 | Cre-Chr7:3891444 | 2.10E-30 | transposed | |
| Cre11g2195 | Cre-Chr11:33662839 | Cre07g0608 | Cre-Chr7:3891444 | 1.30E-100 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cre07g0608 | K17506 | - | csv:101211399 | 493.041 |