Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre07g0627 ATGGAACTTGAAGACGACTACCGAAGAAAACAGCAACTCCTTCTTCTGGTAATCGTTGTACTTGCTTCTCTTGCTCTCGTTTCTTTGCTCGTCGCTTTCAGCTATTACTGCTATATCAGCAATAAGGTCTCCAAGCGCCTCAAGATCCGCAAAAGGGCTGATCTTGAAGATGGAGGTAGTTTTGAAAATGGTAAAGAATTTTCCACTGAGAAAGGTCTCCAATTGTTCACCTTCAAGCAGCTACACTCCGCAACAGGTGGTTTTAGCAAGTCAAATGTGGTTGGGCATGGTAGCTTTGGGCATGTATATCGGGGAGTCCTGAACGATGGGAGAAAGGTTGCGGTTAAGCTTATGGATCAAGCGGGGAAGCAGGGAGAGGACGAATTTAAAGTGGAGGTGGAATTGTTAAGTCGCCTTCATTCACCATATTTGTTGGCATTGCTTGGGTATTGCTCAGATAACAATCATAAGTTACTTGTATACGAGTTCATGGCAAATGGCGGTCTGCAAGAACATCTATACCCTATTAGCAGTTCAAATTCAATCAGCGTTAAGTTGGACTGGGAAACACGACTGAGAGTTGCCCTCGAAGCTGCCAAAGGTTTGGAGTATTTACATGAACACGTATGTCCCCCGGTAATTCATAGGGATTTCAAGAGCAGCAATGTCCTGCTGGACAAAAACCTTCATGCTAAGGTTTCTGATTTTGGATTGGCAAAGATCGGCTCAGACAAAGCCGGGGGTCACGTCTCCACTCGAGTTTTAGGGACACAAGGATATGTTGCCCCTGAGTATGCACTAACAGGGCATTTAACAACAAAGTCAGATGTCTATAGTTATGGGGTTGTCCTCTTGGAGCTGCTCACTGGCAGAGTTCCAGTTGATATGAAGAGAACTCCTGGGGAAGCTTCCCTTGTTTCTTGGGCTTTGCCGAGGCTGACTGATAGGGAGAGAGTGATGCATATAATGGACCCTGCATTGGAGGGTCAGTACTCCGTGAAAGATGTTGTTCAAGTGGCAGCAATTGCAGCAATGTGTGTTCAACCGGAGGCGGATTACAGGCCGCTGATGGCCGATGTTGTCCAGTCACTGGTTCCGCTTGTGAGAAATTACCGGACTTCAAAGATCGGTAGCAGTTCTAGTTCCAGCGCTACCAAGTCGCCTGCAGCACACGACAATGCTAGTTCGGGAGACTGA 1197 46.78 MELEDDYRRKQQLLLLVIVVLASLALVSLLVAFSYYCYISNKVSKRLKIRKRADLEDGGSFENGKEFSTEKGLQLFTFKQLHSATGGFSKSNVVGHGSFGHVYRGVLNDGRKVAVKLMDQAGKQGEDEFKVEVELLSRLHSPYLLALLGYCSDNNHKLLVYEFMANGGLQEHLYPISSSNSISVKLDWETRLRVALEAAKGLEYLHEHVCPPVIHRDFKSSNVLLDKNLHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAPEYALTGHLTTKSDVYSYGVVLLELLTGRVPVDMKRTPGEASLVSWALPRLTDRERVMHIMDPALEGQYSVKDVVQVAAIAAMCVQPEADYRPLMADVVQSLVPLVRNYRTSKIGSSSSSSATKSPAAHDNASSGD 398
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 4058882 4061877 - CrPI670011_07g006270.1 Cre07g0627 503208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre07g0627 398 Gene3D Phosphorylase Kinase; domain 1 55 163 - -
Cre07g0627 398 FunFam Serine/threonine-protein kinase PBS1 57 163 - -
Cre07g0627 398 Pfam Protein tyrosine and serine/threonine kinase 91 364 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cre07g0627 398 ProSitePatterns Serine/Threonine protein kinases active-site signature. 213 225 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cre07g0627 398 SUPERFAMILY Protein kinase-like (PK-like) 66 364 IPR011009 -
Cre07g0627 398 Gene3D Transferase(Phosphotransferase) domain 1 164 387 - -
Cre07g0627 398 ProSiteProfiles Protein kinase domain profile. 88 368 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cre07g0627 398 CDD STKc_IRAK 94 367 - -
Cre07g0627 398 ProSitePatterns Protein kinases ATP-binding region signature. 94 116 IPR017441 GO:0005524(InterPro)
Cre07g0627 398 PANTHER OS01G0750732 PROTEIN 19 389 IPR050885 -
Cre07g0627 398 MobiDBLite consensus disorder prediction 375 398 - -
Cre07g0627 398 FunFam Receptor-like serine/threonine-protein kinase ALE2 164 384 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre05g1817 Cre-Chr5:30291038 Cre07g0627 Cre-Chr7:4058882 2.50E-73 dispersed
Cre07g0627 Cre-Chr7:4058882 Cre10g1311 Cre-Chr10:26393469 9.10E-87 dispersed
Cre09g0315 Cre-Chr9:3072099 Cre07g0627 Cre-Chr7:4058882 5.40E-13 dispersed
Cre07g0627 Cre-Chr7:4058882 Cre03g1947 Cre-Chr3:36529118 9.60E-113 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
64254 PF07714 PK_Tyr_Ser-Thr 1.30E-44 CL0016 Cre PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre07g0627 - - - 0.0