Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre07g0637 ATGGCTTCCACTAAAGAACGCGAGAACTTCGTTTACATCGCTAAGCTCGCCGAGCAGGCCGAGCGTTATGATGAAATGGTGGATGCAATGAAGAATGTTGCAAAGCTTGATGTCGAATTGACAGTTGAGGAAAGAAACTTACTTTCTGTTGGGTACAAGAATGTGGTTGGTGCACGGCGAGCCTCATGGAGAATCTTATCATCAATAGAGCAGAAAGAAGAAGCGAAAGGAAATGAAACAAATGCTAAACGCATCAAAGAATACAGACAAAAGGTTGAATCAGAGCTCTCTGGTATTTGTAATGATATCATGACAGTGATTGACGAGCACCTAATTCCGTCGGCTTCAGCTGGGGAATCAACAGTATTCTACTATAAGATGAAAGGAGACTATTATCGTTACCTTGCAGAATTTAAATCTGGTAATGAGAAGAAAGATGCAGCTGATCAATCGATGAAAGCATATGAGGCTGCAACCAGCTCAGCCGAATCTGAGTTACCCCCTACACATCCTATCCGCTTGGGGTTGGCATTAAATTTCTCTGTCTTCTATTATGAAATCTTGAATTCACCTGAAAGGGCCTGCCACCTTGCAAAGCAAGCTTTTGATGAAGCCATTTCCGAACTTGACACCCTGAATGAGGAGTCATACAAAGATAGCACCTTAATCATGCAGCTTCTTAGGGACAACCTTACACTATGGACTTCTGACATCCCAGAAGATGGAGATGATGCCCAAAAGATCAATGGCACTGCCAAGGTTTCTGGTGGTGACGATGCCGAGCATCTTAATTGGCACAATCTGTACTCTGGAGATGATGGATGTGACTCGGATAATTGCCCTTAG 846 43.38 MASTKERENFVYIAKLAEQAERYDEMVDAMKNVAKLDVELTVEERNLLSVGYKNVVGARRASWRILSSIEQKEEAKGNETNAKRIKEYRQKVESELSGICNDIMTVIDEHLIPSASAGESTVFYYKMKGDYYRYLAEFKSGNEKKDAADQSMKAYEAATSSAESELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAISELDTLNEESYKDSTLIMQLLRDNLTLWTSDIPEDGDDAQKINGTAKVSGGDDAEHLNWHNLYSGDDGCDSDNCP 281
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 4158873 4162235 + CrPI670011_07g006370.1 Cre07g0637 503218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre07g0637 281 ProSitePatterns 14-3-3 proteins signature 2. 217 236 IPR023409 -
Cre07g0637 281 PIRSF 14-3-3 1 247 IPR000308 -
Cre07g0637 281 Coils Coil 195 215 - -
Cre07g0637 281 Pfam 14-3-3 protein 14 235 IPR023410 -
Cre07g0637 281 PANTHER 14-3-3 PROTEIN 6 240 IPR000308 GO:0005737(PANTHER)|GO:0007165(PANTHER)|GO:0034613(PANTHER)
Cre07g0637 281 ProSitePatterns 14-3-3 proteins signature 1. 45 55 IPR023409 -
Cre07g0637 281 PRINTS 14-3-3 protein zeta signature 119 141 IPR000308 -
Cre07g0637 281 PRINTS 14-3-3 protein zeta signature 208 237 IPR000308 -
Cre07g0637 281 PRINTS 14-3-3 protein zeta signature 181 207 IPR000308 -
Cre07g0637 281 PRINTS 14-3-3 protein zeta signature 154 180 IPR000308 -
Cre07g0637 281 PRINTS 14-3-3 protein zeta signature 39 68 IPR000308 -
Cre07g0637 281 PRINTS 14-3-3 protein zeta signature 88 112 IPR000308 -
Cre07g0637 281 Gene3D - 1 249 IPR036815 -
Cre07g0637 281 FunFam 14-3-3 protein epsilon 2 248 - -
Cre07g0637 281 SUPERFAMILY 14-3-3 protein 6 237 IPR036815 -
Cre07g0637 281 Coils Coil 13 33 - -
Cre07g0637 281 SMART 1433_4 7 248 IPR023410 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre07g0637 Cre-Chr7:4158873 Cre08g0978 Cre-Chr8:22915643 4.60E-109 dispersed
Cre07g0637 Cre-Chr7:4158873 Cre08g1047 Cre-Chr8:23632186 1.70E-111 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre07g0637 K06630 - csv:101208446 500.36