Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cre07g0641 ATGTCTTCTTCTTCTTCATCCACTATCTTCTGCGCCGTAATTTCGTTTCTAATCTCCATTTCCATCTCAGTCTCAGCTACAGAGTTTGTCTTCAACACCAATTTCACTTCCACCAATACTTTGCTCTTCGGCAACGCCACCATTGATTCTTCTCTTCTTATTCTCACTAGAGATTCCCCTTTCACCATCGGCCGTGCCCTTTACCCTTTCAAAATTCCCATCCATTTTTCCAATTCTTCATTTTCCTTTGCAACTTCCTTCATTTTCTCTGTTGCCCCTCAGCCAAATCTTCTCCCTGGCCATGGATTTGCTTTTCTCTTCACACCCTTTACTGGAATCAACGGCACCAGCTCGGCTCAGCATTTGGGGCTTTTCAATTTCACCAATAATGGCAGCCCCAATAACCATGTCTTCGCTGTTGAGTTCGATTCGTTCCAAAATCAGGAGTTCAATGACACTAATGATAACCACGTGGGCGTGGATTTGAATTCTCTTGAATCTACTGTTTCCTCAGCAGCTGGGTTTTGGAGTGGACCAGGTGATGGAGAATTCAAGGTATTGAAGATCAATAACGGAGAAACTTATCAGGTTTGGATTGACTGTCTAGATTCTTTAGTTAATATTACTATGGCTGAACTGGGAATGAAAAGGCCTAGAAGGCCATTGATATCTCTATCTGTTAATTTTTCTGGATTGCTTTTGGATGAGATGTATGTAGGATTTACAGCAGCCACAGGGCAATTAGTTCAAAGCCATAAGATATTATCTTGGAGTTTTAGTACCTCTAACTTGTCTATTGCTGATTCTTTACTGATAACGAATTTGCCTTCTTTTGTTCCTCAAAAGGAGGACGCCACTTTTGAATCAATAGCTTTCATATTGGGGATAACTCTTGGGGGAGCTGGACTTGTGATTATCTGTAGTTTTGTAATCTATGTTGCTGTAGTTGTCAAAAGGAGGGGAAGAAAGAAACCAAAGGATGATGAAATTGAAGATTGGGAGTTAGAATATTGGCCTCATCGGTTTGCTTATGAAGATGTTTATGAAGCAACTGATGGATTCTCAGAAGCCAATGTAATTGGGTTTGGGCGAAATGGTAAGGTCTATAAAGGGACATTAGGGAGATCAAAAGTTGCTGTAAAGAGAATCTCTGTTGAAGTTGAGAGTGGAATGAGAGAGTTTGTAGCTGAGATTTCAAGCTTAGGAAGATTACAGCATAGAAATCTAGTAAAGCTTATAGGATGGTGTAAGAAGGAGAAAGGAAGTTTAATCTTAATGTATGATTACATGGAAAATGGAAGTTTAGACAAAAAACTATTTGAGTGTGATGAGAATGAAATGTTAAGTTGGGAGAAAAGGATAAAAGTTTTGAGAGATGTAGCCACAGGGTTGCTATATCTACACCAAGGTTGGGATTCCAAGGTTCTGCATAGAGATATAAAGGCGAACAACGTGCTACTCGACAAGGACATGAATGCTAGGTTAGGAGACTTTGGGTTGGCTCGAATGCAACCCCATGAACGAACAGCAGACACAACTCGTGTAATGGGGACTGTCGGGTATATGGCACCAGAGGTGGTTCGAACAGGGCGAGTATCTGCACAAGCGGATGTTTTCGGGTTCGGAGTATTGGTTTTGGAGGTGGTTTGTGGGAGGAGAGCAATAGAAGAAGGGAAGCCATGGTTGATAGATTGGGTTAGAGGATTAATGGAGAGGAATGAGATTGGATTAGCAGTTGATGAGAGATTGAAAGTTGAGGGTATAAGTGGGAATGAGATTGATGAAATGGAGAGAATGGTTTGTTTGGGGTTATTATGTGCTCATAATGAAGCTGGTGCAAGGCCAACAATGCAACAAGTTGTGAATATTTTGTGTGAGAGAAATGGAAATGGTTCAAATGATGGATTGTTAAATAGATTAAGATCAACAAGAATACTGTCTGAGATTTACCAAGGCAACAATTTTCAGCAACATCATCCAACGTTTGAAGAAATCAAAACATCTTCATCTTCAACATCACTCATTGAATCAGATATTTTAAGGAGTGGCCGCTAG 2055 40.44 MSSSSSSTIFCAVISFLISISISVSATEFVFNTNFTSTNTLLFGNATIDSSLLILTRDSPFTIGRALYPFKIPIHFSNSSFSFATSFIFSVAPQPNLLPGHGFAFLFTPFTGINGTSSAQHLGLFNFTNNGSPNNHVFAVEFDSFQNQEFNDTNDNHVGVDLNSLESTVSSAAGFWSGPGDGEFKVLKINNGETYQVWIDCLDSLVNITMAELGMKRPRRPLISLSVNFSGLLLDEMYVGFTAATGQLVQSHKILSWSFSTSNLSIADSLLITNLPSFVPQKEDATFESIAFILGITLGGAGLVIICSFVIYVAVVVKRRGRKKPKDDEIEDWELEYWPHRFAYEDVYEATDGFSEANVIGFGRNGKVYKGTLGRSKVAVKRISVEVESGMREFVAEISSLGRLQHRNLVKLIGWCKKEKGSLILMYDYMENGSLDKKLFECDENEMLSWEKRIKVLRDVATGLLYLHQGWDSKVLHRDIKANNVLLDKDMNARLGDFGLARMQPHERTADTTRVMGTVGYMAPEVVRTGRVSAQADVFGFGVLVLEVVCGRRAIEEGKPWLIDWVRGLMERNEIGLAVDERLKVEGISGNEIDEMERMVCLGLLCAHNEAGARPTMQQVVNILCERNGNGSNDGLLNRLRSTRILSEIYQGNNFQQHHPTFEEIKTSSSSTSLIESDILRSGR 684
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
7 4204046 4206100 - CrPI670011_07g006410.1 Cre07g0641 503222
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cre07g0641 684 CDD lectin_legume_LecRK_Arcelin_ConA 27 262 IPR001220 GO:0030246(InterPro)
Cre07g0641 684 PANTHER - 29 626 IPR050528 GO:0005886(PANTHER)
Cre07g0641 684 ProSitePatterns Protein kinases ATP-binding region signature. 360 381 IPR017441 GO:0005524(InterPro)
Cre07g0641 684 Gene3D Phosphorylase Kinase; domain 1 339 429 - -
Cre07g0641 684 SMART serkin_6 354 623 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cre07g0641 684 SUPERFAMILY Concanavalin A-like lectins/glucanases 26 269 IPR013320 -
Cre07g0641 684 ProSiteProfiles Protein kinase domain profile. 354 637 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cre07g0641 684 Gene3D - 25 272 - -
Cre07g0641 684 SUPERFAMILY Protein kinase-like (PK-like) 330 624 IPR011009 -
Cre07g0641 684 FunFam L-type lectin-domain containing receptor kinase S.4 430 634 - -
Cre07g0641 684 Gene3D Transferase(Phosphotransferase) domain 1 430 636 - -
Cre07g0641 684 FunFam L-type lectin-domain containing receptor kinase V.9 25 269 - -
Cre07g0641 684 FunFam Putative L-type lectin-domain containing receptor kinase VII.2 315 429 - -
Cre07g0641 684 Pfam Protein kinase domain 356 568 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cre07g0641 684 ProSitePatterns Serine/Threonine protein kinases active-site signature. 475 487 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cre07g0641 684 Pfam Legume lectin domain 28 264 IPR001220 GO:0030246(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre07g0641 Cre-Chr7:4204046 Cre10g2241 Cre-Chr10:36800090 1.30E-125 dispersed
Cre03g0898 Cre-Chr3:7721827 Cre07g0641 Cre-Chr7:4204046 6.30E-213 transposed
Cre11g2136 Cre-Chr11:33047180 Cre07g0641 Cre-Chr7:4204046 1.10E-52 wgd
       

Transcription factors information


Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
64255 PF00069 Pkinase 2.00E-44 CL0016 Cre PK
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre07g0641 - - - 0.0