Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre07g0660 ATGGTGGGCTCTGAGGAGGACTCTGGTACTTCTGGGGCTGCGGCGGTGCAGCTCTCTGGCAGTCGGAAAATGTTCTGGCGCTCGGCTTCATGGTCTGCATCACGTTCCTCACTTCACCATCCTGAAGTGAACAGAGAAGGTGGAGACCCCAATGGGAATCTTGGTGATAGTAATGGACCAAGCCGAATTTTCCCTGCTCCATTAACTCCAAGATCACAGCAGCATTGCAAAGCAAGGTCGTGTTTGCCTCCTTTACAGCCTTTGTCGATTGCTCGGCGAAGCTTAGATGAATGGCCGAAGGCAGGGTCAGATGATATCGGCGAGTGGCCACAACCTCCTACTCCGAGTGGCAGAGGAAATGGCGAGAGGTTGAAACTTGATTTGTCGACAATTCAGAGAAATCCAGAAAAGAACTGTGGGCTGGTGAAGAGGGATAAGATTGCTTTCTTTGACAAAGAGTGTTCAAAAGTGGCGGAACATGTATATCTTGGTGGTGATGCGGTTGCTCGAGATAGGGATATACTTAAACATAATGGAATTACTCATGTGTTGAATTGTGTAGGATTCGTATGCCCGGAGTACTTCAAAGATGATTTTGTGTACAGAACTTTGTGGTTGCAGGATAGCCCATCTGAGGATATTACTAGTATTCTTTATGATGTTTTTGACTACTTTGAAGATGTTAGGGAAAAAAATGGTAGGGTTTTTGTTCATTGTTGCCAAGGAGTATCACGGTCGACGTCCTTGGTGATTGCCTATCTGATGTGGAGAGAAGGGCAGAGTTTTGATGATGCATTTCAATATGTGAAGGCAGCCAGAGGTATTGCCGACCCGAACATGGGTTTTGCTTGCCAGTTATTGCAGTGCCAAAAGCGGGTCCATGCTTTTCCTCTTAGCCCAAGTTCATTGTTGAGGATGTACAGAATTGCTCCACACTCACCCTATGATCCTTTGCATTTGGTCCCCAAAATGTTAAATGATCCTTCGCCCTCAGCTCTGGATTCTAGAGGTGCATTTATCATTCATATACCCTCTGCCATATTTGTTTGGATTGGTAAAAACTGCGAAGCTATCATGGAAAGAGATGCGAGGGGAGCTGTTGTGCAGATTGTTCGGTATGAGAGAGTGCAAGGGCCTATATATGTAATTAAGGAAGGGGAAGAACCAACAAACTTTTGGGATTCTTTTGCAAACCTATTACCTTTAATGGATAAATCTAACAGTAAAGTTAATCTTGGGGAATTAAAAGTTAAGCCTTATCCAGGGGAGAGGAAAGTTGATTCCTATGATGTGGATTTTGAAATTTTTCAGAAGGCTATTACTGGTGGTTTCGTACCTCCATTTCCTTCATCTGAAAATGAGCATGAAACCCATCTTCCTGTTAGAGAAAGCAGTTGGAGTGTGCTTAGGCGTAAGTTTGCCTCTGGAAATATGAAAGAGTTTGTATCAGCTCCCCGAATATCGCTTTCTAGGGTCTATTCAGACTCGTTGATGATGATGCATTTTTCTGCAAAATCTTCATCACCTTCAGCATTTTCTTTATCGTCATCATCTTCTTCTCCTATCTATCTTTCGCCGGACTCTCTCTCTTCTGATTCAAGTTCAAGTTCAAGTTCCAAGTATTTTTCAGAATCTTCTTTAGATTCTCCATCTGCTTCTTCACCTTCAGTTCCAGTTTCCTCGTCTCTGTCTAGTTTTTCTAGCATGTCTCTTACCTCATCCAATAGTTCCTTAGAGCCTATGCCCAATGGTCCAGAAACTAATGATGCAGTCCCTTTGGAATCAAGTTCTCGCCCATTCTCATTCCCATCTAAAAAGTTCTCACCTTCTCTCGCAGAACGTCGAGGTACTGCAAAATCTCTGACATTGCCTGCAATGCCTAGTAAAATCAAAGCAACAAATAGTGCCTCAAGGTTTCTCGCCACTCAAGAAGATTTAAAGAGGAAAAACAAGACTTCTTGCCCTCTTAATGTATCAAGTAATATGAAAAATGGCTCAGAGCCTATGGATAGGGTTGAAAATGAACAAACAAGTTCCACTCAGAAGTTCAAGAATATTGAAAATGGAATGGACGTAAGGGTAGGTAGTGTGGCCTCGTGCCAGCAGGAAACTAAAGTTGCCGGACAATCTGCTGGTTCCTGGAAAAGCTATCCCAAACTTTTTGGAGAAGGCATGGTATCCAATGTGTCAAATGGAAAGCAAGATGATGAATTTGTGCAACCTATGGTATACTGTTGGCCGGAGTTGGAAAAGATTGCAGCTTTTGACACAAGTTACCTCAATTCTAAAGCTGCTGTAGTGATTTTCTCTCCAAGTAGGTATTTAGGCAAGAAGGATGACATGATGCTGTATATTTGGGTAGGAAGTTCTTTTGACCATGATTTATCACAGGTTCATGTAAAGAGGGATAAAGACTTGGTTGATTTAGAACAGATAGACTGGGTTAAAGTTGGTCAATATGTACTTACGGAAATAGGTCTGCCAGAAAATACAGAAATTAAGATTGTTAAAGAAGGTGAAGAAACAGAGGAATTTCTTGCACGATTGATCATCAAAGATGGACTCCCCTTACGTAATTTAGTGAGGAGACGCTTGAAAATCCAAGTCGTTTTATAG 2616 42.35 MVGSEEDSGTSGAAAVQLSGSRKMFWRSASWSASRSSLHHPEVNREGGDPNGNLGDSNGPSRIFPAPLTPRSQQHCKARSCLPPLQPLSIARRSLDEWPKAGSDDIGEWPQPPTPSGRGNGERLKLDLSTIQRNPEKNCGLVKRDKIAFFDKECSKVAEHVYLGGDAVARDRDILKHNGITHVLNCVGFVCPEYFKDDFVYRTLWLQDSPSEDITSILYDVFDYFEDVREKNGRVFVHCCQGVSRSTSLVIAYLMWREGQSFDDAFQYVKAARGIADPNMGFACQLLQCQKRVHAFPLSPSSLLRMYRIAPHSPYDPLHLVPKMLNDPSPSALDSRGAFIIHIPSAIFVWIGKNCEAIMERDARGAVVQIVRYERVQGPIYVIKEGEEPTNFWDSFANLLPLMDKSNSKVNLGELKVKPYPGERKVDSYDVDFEIFQKAITGGFVPPFPSSENEHETHLPVRESSWSVLRRKFASGNMKEFVSAPRISLSRVYSDSLMMMHFSAKSSSPSAFSLSSSSSSPIYLSPDSLSSDSSSSSSSKYFSESSLDSPSASSPSVPVSSSLSSFSSMSLTSSNSSLEPMPNGPETNDAVPLESSSRPFSFPSKKFSPSLAERRGTAKSLTLPAMPSKIKATNSASRFLATQEDLKRKNKTSCPLNVSSNMKNGSEPMDRVENEQTSSTQKFKNIENGMDVRVGSVASCQQETKVAGQSAGSWKSYPKLFGEGMVSNVSNGKQDDEFVQPMVYCWPELEKIAAFDTSYLNSKAAVVIFSPSRYLGKKDDMMLYIWVGSSFDHDLSQVHVKRDKDLVDLEQIDWVKVGQYVLTEIGLPENTEIKIVKEGEETEEFLARLIIKDGLPLRNLVRRRLKIQVVL 871
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 4336779 4341433 + CrPI670011_07g006600.1 Cre07g0660 503241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre07g0660 871 ProSiteProfiles Dual specificity protein phosphatase domain profile. 153 295 IPR020422 GO:0006470(InterPro)
Cre07g0660 871 MobiDBLite consensus disorder prediction 571 627 - -
Cre07g0660 871 CDD DSP 154 288 - -
Cre07g0660 871 SMART VILL_6 305 399 IPR007122 GO:0051015(InterPro)
Cre07g0660 871 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 147 294 IPR029021 -
Cre07g0660 871 MobiDBLite consensus disorder prediction 100 120 - -
Cre07g0660 871 SUPERFAMILY Actin depolymerizing proteins 300 401 - -
Cre07g0660 871 Gene3D Severin 304 399 IPR029006 -
Cre07g0660 871 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 212 273 IPR000387 GO:0016311(InterPro)
Cre07g0660 871 Pfam Dual specificity phosphatase, catalytic domain 161 291 IPR000340 GO:0016311(InterPro)
Cre07g0660 871 SMART dsp_5 153 292 IPR020422 GO:0006470(InterPro)
Cre07g0660 871 MobiDBLite consensus disorder prediction 571 604 - -
Cre07g0660 871 ProSitePatterns Tyrosine specific protein phosphatases active site. 237 247 IPR016130 GO:0016311(InterPro)
Cre07g0660 871 MobiDBLite consensus disorder prediction 652 678 - -
Cre07g0660 871 Gene3D Protein tyrosine phosphatase superfamily 136 295 IPR029021 -
Cre07g0660 871 PANTHER MKPA PROTEIN 16 847 - -
Cre07g0660 871 MobiDBLite consensus disorder prediction 29 78 - -
Cre07g0660 871 MobiDBLite consensus disorder prediction 643 678 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre05g2754 Cre-Chr5:38364632 Cre07g0660 Cre-Chr7:4336779 7.30E-158 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre07g0660 - - - 0.0