Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cre07g0671 | ATGGAGGGTTTTGTGAGGTTTTTGGGTTTGGCAAAGCCATATTTTGGAGTTCTTTTTATGCAATTTGGTTCGGCTGGAATGGCGATTCTTGCAAAGTTTGCTTTGAACAAAGGGATGAGCCAATATGTTTTTGTGTTTTATCGTATGATTATCGCTACTATTATTATTGCTCCTTTTGCCATCATATTTGAAAGGAAAGTGAAGACAAAGATGACCATTCCGTTGGTCTTCAAGATTGTGATGTTGGGTTTATTAGAGCCAGTGATTGATCTCAACTTATACTTTACTGGGATGAAGTATACAACAGCAACCTTTGCAGTTGCCATGTGCAATGTTCTACCAGCTTTTGCTTTCCTCATGGCTTGGGCTTGCAGGCTTGAGAGAGTGAATATTTTGAAAAGGGGAAGCCAAGCAAAAATCCTAGGAACCATAGTAACAGTAGGAGGAGCGATGATTATGACTTTCATTAGAGGACCCATGTTGAATCTGCCATGGACAAAAGCCAACCATCCCTCTGCTTCTTCTTCAACTGCTTCAATAAATCACCAAGACCAAATCAAGGGCTCCCTCATGATTGCAATTGGCTGCATTTGCCAGTCAGCTTTCATCATTCTTCAGGCGATTACATTGAAATTGTACCCAGCTGAGCTGTCTCTTACAGCATTGATATGCTTGGTGGCCACCATTGGAGGCTGTGTGGTTGCTTTGGTCATGGAAAGAGGGAACCCTTCTGCTTGGGCTTTGCATTTTGATAGCCAGCTTCTATCTGTGGTTTACGCTGGAGTAATATGTTCAGGGGTAACATATTATATTCAAGGAATGGTGATGCAAATAAAAGGGCCTGTTTTTGTCACTGCATTCAATCCTCTGTCCATGATTTTTGTTGCAATCATGAGCTCCTTCATCTTGTCTGAGATTATGTTGCTGGGCAGGATTATTGGAGCAGTGACCATAATCACTGGGTTGTACCTAGTTCTGTGGGGCAAAAGAAAAGATCAACTTTCAGTTAAATCAGACTGTGATAACATAGCAAATGGTAAGCAACAAATGACTGAAATAGGTGAGGCTTCGAAGACGGATCAATCGAGTCAAGAATTCGCCTCAGCTTGA | 1110 | 41.62 | MEGFVRFLGLAKPYFGVLFMQFGSAGMAILAKFALNKGMSQYVFVFYRMIIATIIIAPFAIIFERKVKTKMTIPLVFKIVMLGLLEPVIDLNLYFTGMKYTTATFAVAMCNVLPAFAFLMAWACRLERVNILKRGSQAKILGTIVTVGGAMIMTFIRGPMLNLPWTKANHPSASSSTASINHQDQIKGSLMIAIGCICQSAFIILQAITLKLYPAELSLTALICLVATIGGCVVALVMERGNPSAWALHFDSQLLSVVYAGVICSGVTYYIQGMVMQIKGPVFVTAFNPLSMIFVAIMSSFILSEIMLLGRIIGAVTIITGLYLVLWGKRKDQLSVKSDCDNIANGKQQMTEIGEASKTDQSSQEFASA | 369 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 7 | 4455874 | 4459751 | - | CrPI670011_07g006710.1 | Cre07g0671 | 503252 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cre07g0671 | 369 | SUPERFAMILY | Multidrug resistance efflux transporter EmrE | 47 | 155 | - | - | |
| Cre07g0671 | 369 | SUPERFAMILY | Multidrug resistance efflux transporter EmrE | 244 | 331 | - | - | |
| Cre07g0671 | 369 | Pfam | EamA-like transporter family | 187 | 326 | IPR000620 | GO:0016020(InterPro) | |
| Cre07g0671 | 369 | Pfam | EamA-like transporter family | 14 | 153 | IPR000620 | GO:0016020(InterPro) | |
| Cre07g0671 | 369 | PANTHER | WAT1-RELATED PROTEIN | 18 | 344 | IPR030184 | GO:0005886(PANTHER)|GO:0016020(InterPro)|GO:0022857(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cre01g0459 | Cre-Chr1:3920629 | Cre07g0671 | Cre-Chr7:4455874 | 3.00E-89 | dispersed | |
| Cre01g0460 | Cre-Chr1:3952799 | Cre07g0671 | Cre-Chr7:4455874 | 4.80E-106 | dispersed | |
| Cre07g0671 | Cre-Chr7:4455874 | Cre11g1981 | Cre-Chr11:31568705 | 1.90E-83 | dispersed | |
| Cre07g0671 | Cre-Chr7:4455874 | Cre07g0673 | Cre-Chr7:4486908 | 4.80E-151 | proximal | |
| Cre01g0458 | Cre-Chr1:3897674 | Cre07g0671 | Cre-Chr7:4455874 | 1.10E-110 | wgd | |
| Cre04g0938 | Cre-Chr4:28054495 | Cre07g0671 | Cre-Chr7:4455874 | 1.40E-108 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cre07g0671 | - | - | - | 0.0 |