Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre07g0673 ATGGAGAGTTTTGTAAGGTTTTTGGGTTCGGCAAAACCGTATTTTGGAGTGATTTTTATACAGTTTGGTTATGCTGGAATGACGATTCTTACAAAATCAGCTTTGAACAAAGGGATGAGCCAATATATTTTCGTGGTTTATCGTCAAGTTGCTGCTACTCTTGTCATGGCTCCTTTTGCCATTATCTTTGATAGGAAGGCGAGGACAAAGATGACCTTTTCATTGTTCTTCAAGATTTTGATTCTGGGTTTCTTAGAGCCAGTGATTGATCAAAACTTATTCTATACTGGTATGAAGTACACAACAGCAACTTTTGCATCTGCCATGTGCAATGTTCTTCCAGCTTTTGTTTTCCTCATGGCTTGGGCTTGCAGGCTTGAGAAAATGAATATTTTGAAAAGGGGAAGCCAAGCAAAAATCCTAGGAACCATAGTAACAGTAGGAGGAGCCATGATTATGACCTTCATAAAAGGGCCAATGTTGAATTTACCATGGACAAAATTACCCAATCACCCCTCTGCTTCTTCATCATCAGCTTCTTCTCCAAATCACCAAAGCACAATCATGGGCTTCCTCATGATTGCAACTGGCTGCGTTTGCTGGTCAGCTTTCATCATTCTTCAGGCGATTACGTTGAAATCGTACCCAGCCGAGCTATCGCTTACAGCATTGATATGCTTGGTTGGCACCATTGGAGGCTCTGGGTTTGCTTTGATCATGGAGAGGGGGAACCCTTCTGCTTGGGCTTTGCACTTTGACAGCCAGCTTCTAGCTGTGGTTTATTCTGGTGTAATATGTTCAGGGGTAACTTATTATATTCAAGGAGTGGTGATGCAAACAAAAGGGCCTGTTTTTTTCTCTGCATTCAATCCTCTGTCCATGATTCTTGTTGCAATCATGAGCTCCTTCATCTTGTCTGAGATTATGTTGTTGGGAAGGATTGTTGGAGCAGTGGTCATAATCATTGGCTTGTACCTTGTTTTGTGGGGGAAAACCAAAGATCAGCCTTCAATACTTAAATCAGAATGTGATAAGATAACACCTTGTGAGCAACAAATGATCACTGCAAATGATGAGGCTTCCAAGACTACGATGACGGTTCGATCGAGTCAAGAATTCGTTGCGCTTGATGTTGAAAAAGAGGAGAGAAATTGA 1155 41.56 MESFVRFLGSAKPYFGVIFIQFGYAGMTILTKSALNKGMSQYIFVVYRQVAATLVMAPFAIIFDRKARTKMTFSLFFKILILGFLEPVIDQNLFYTGMKYTTATFASAMCNVLPAFVFLMAWACRLEKMNILKRGSQAKILGTIVTVGGAMIMTFIKGPMLNLPWTKLPNHPSASSSSASSPNHQSTIMGFLMIATGCVCWSAFIILQAITLKSYPAELSLTALICLVGTIGGSGFALIMERGNPSAWALHFDSQLLAVVYSGVICSGVTYYIQGVVMQTKGPVFFSAFNPLSMILVAIMSSFILSEIMLLGRIVGAVVIIIGLYLVLWGKTKDQPSILKSECDKITPCEQQMITANDEASKTTMTVRSSQEFVALDVEKEERN 384
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 4486908 4493006 - CrPI670011_07g006730.1 Cre07g0673 503254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre07g0673 384 SUPERFAMILY Multidrug resistance efflux transporter EmrE 250 333 - -
Cre07g0673 384 Pfam EamA-like transporter family 189 328 IPR000620 GO:0016020(InterPro)
Cre07g0673 384 Pfam EamA-like transporter family 14 153 IPR000620 GO:0016020(InterPro)
Cre07g0673 384 SUPERFAMILY Multidrug resistance efflux transporter EmrE 47 155 - -
Cre07g0673 384 PANTHER WAT1-RELATED PROTEIN 18 347 IPR030184 GO:0005886(PANTHER)|GO:0016020(InterPro)|GO:0022857(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre01g0458 Cre-Chr1:3897674 Cre07g0673 Cre-Chr7:4486908 7.20E-110 dispersed
Cre04g0938 Cre-Chr4:28054495 Cre07g0673 Cre-Chr7:4486908 2.50E-110 dispersed
Cre05g2679 Cre-Chr5:37740165 Cre07g0673 Cre-Chr7:4486908 1.60E-24 dispersed
Cre07g0673 Cre-Chr7:4486908 Cre11g1981 Cre-Chr11:31568705 1.10E-92 dispersed
Cre07g0671 Cre-Chr7:4455874 Cre07g0673 Cre-Chr7:4486908 4.80E-151 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre07g0673 - - - 0.0