Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre07g0758 ATGGAGGGGAAGGAGGAAGATGTCCGACTGGGAGCCAACAAGTTCAACGAGAGGCAGCCCATTGGGACGGCGGCGCAGAGCCAAGACAGCGCCAAGGACTACAAGGAGCCACCACCGGCGCCTCTGTTCGAGCCAGACGAGCTCACTTCATGGTCCTTTTACAGAGCTGGAATCGCAGAGTTTTTCGCCACTTTCCTCTTCCTTTACATCACCGTTTTGACCGTCATGGGTGTCGTCCGGTCCAACGAAGCCAACGGCAACACCTGTAAGACCGTCGGGATTCAGGGGATTGCTTGGGCTTTCGGGGGTATGATTTTTGCTCTGGTTTACTGTACTGCTGGAATCTCCGGTGGCCACATTAACCCGGCAGTGACTTTTGGGCTGTTTCTGGCGAGAAAGCTGTCGTTGACCAGGGCGATTTTCTACATAGTGATGCAGTGCCTTGGTGCTATCTGCGGAGCCGGCGTGGTGAAGGGATTCCAACCCAAGCCCTACGAAAGGCTCGGCGGTGGAGCGAACGTTGTGAACAGTGGATACACCAAAGGAGATGGGCTGGGCGCCGAGATCGTGGGTACTTTCATCCTTGTTTACACCGTCTTCTCCGCCACTGACGCCAAACGCAGCGCCAGAGACTCGCATGTTCCGATTTTGGCACCACTACCAATTGGGTTTGCAGTGTTCTTAGTCCACTTGGCCACCATTCCGATCACCGGCACGGGCATTAACCCAGCCAGGAGTTTGGGAGCAGCCATCATCTTCAACCAGGACAAAGCATGGGACGATCACTGGATATTCTGGGTTGGACCATTCATCGGAGCAGCATTGGCAGCTTTATACCATCAAGTGGTGATTAGAGCCATTCCCTTCAAGTCCAAATGA 879 54.38 MEGKEEDVRLGANKFNERQPIGTAAQSQDSAKDYKEPPPAPLFEPDELTSWSFYRAGIAEFFATFLFLYITVLTVMGVVRSNEANGNTCKTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAIFYIVMQCLGAICGAGVVKGFQPKPYERLGGGANVVNSGYTKGDGLGAEIVGTFILVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIFNQDKAWDDHWIFWVGPFIGAALAALYHQVVIRAIPFKSK 292
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 5749591 5750635 - CrPI670011_07g007580.1 Cre07g0758 503339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre07g0758 292 Gene3D Glycerol uptake facilitator protein. 40 291 IPR023271 -
Cre07g0758 292 PRINTS Major intrinsic protein family signature 55 74 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Cre07g0758 292 PRINTS Major intrinsic protein family signature 223 245 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Cre07g0758 292 PRINTS Major intrinsic protein family signature 263 283 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Cre07g0758 292 PRINTS Major intrinsic protein family signature 101 125 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Cre07g0758 292 PRINTS Major intrinsic protein family signature 138 157 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Cre07g0758 292 PRINTS Major intrinsic protein family signature 187 205 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Cre07g0758 292 Pfam Major intrinsic protein 47 280 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Cre07g0758 292 CDD MIP 55 283 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Cre07g0758 292 ProSitePatterns MIP family signature. 119 127 IPR022357 -
Cre07g0758 292 FunFam Probable aquaporin PIP1-2 40 292 - -
Cre07g0758 292 SUPERFAMILY Aquaporin-like 47 285 IPR023271 -
Cre07g0758 292 MobiDBLite consensus disorder prediction 1 39 - -
Cre07g0758 292 NCBIfam MIP family channel protein 59 280 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Cre07g0758 292 PANTHER AQUAPORIN OR AQUAGLYCEROPORIN RELATED 5 291 IPR034294 GO:0005773(PANTHER)|GO:0005886(PANTHER)|GO:0009414(PANTHER)|GO:0009506(PANTHER)|GO:0015250(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre07g0756 Cre-Chr7:5736009 Cre07g0758 Cre-Chr7:5749591 2.60E-164 dispersed
Cre07g0758 Cre-Chr7:5749591 Cre09g2261 Cre-Chr9:41798059 1.60E-141 dispersed
Cre07g0757 Cre-Chr7:5744121 Cre07g0758 Cre-Chr7:5749591 2.60E-168 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre07g0758 K09872 - csv:101215145 577.4