Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cre07g0766 | ATGGCTTTTTTCTCCTTCTTCTTCTTCCTCTTTTCCTCTGTTTTAGCTTCTTCTCTGTTTTTTCTCTTCCTCCGCCCCACCAGATTCCGCCGTGTGCGGCTGCCGCCGGGGACACTCGGCCTTCCCTTGATCGGGGAGACCCTTCAGCTCATCTCCGCCTACAAGACCGAGAACCCTGAACCCTTCATCGACGAGCGGGTGCGTAGATTTGGACCGGTTTTTACCACCCATTTGTTCGGTGAGCCGACGGTTTTCTCAGCCGATTGGGAAACCAACCGGTTCATTCTTCAGAATGAGGAGAAGCTTTTTGAGTGTAGTTACCCCGGTTCCATTTCTAACCTACTTGGAAAGCATTCTTTGTTGCTTATGAAAGGGAGTTTACATAAAAGAATGCATTCTTTGACTATGAGCTTTGGGAACTCTTCCATTATTAGAGACCATCTTTTGGTCGATGTCGACCGCTTGATTCGGCTTAATTTGAACTCTTGGACCGGCCGGATCTTCCTCATGGAAGAAGCTAAAAAGATAACATTTGAGTTAGCAGTGAAGCAATTGATGAGCTTTGATCGTTGCGAATGGACTCAAAATCTCATGAAAGAATATCTTCTTGTGATTGAAGGATTTTTTACCGTCCCTCTCCCTCTCTTCTCATCTACTTACCGTCGAGCCATTCAGGCACGGAGGAAGGTGGCGGAGCAATTGGGGACAGTGGTGCGGGAGCGGAGGAAAGAGAGCGAGAATGGAGCGAGGAAGAAGGACATGCTCGGAGCACTGCTCGCTGGAGAAGATGCCCTCTCCGACGAGCAAATAGTAGATTTCTTACTGGCTTTATTGGTGGCGGGATATGAAACGACGTCAACTACCATGACGCTCGCCGTTAAATTTCTGACGGAGACGCCGCTGGCTTTGGCCCAATTACAGGAAGAGCATGAGCAAATCAAAGCAAGAAAGAAGGAATCAGACCAACAACACCTCCAATGGAATGATTACAAGTCCATGCCTTTCACCCAATGTGTTGTGAATGAAACATTAAGAGTTGCCAACATAATCAGTGGCGTATTTAGGAGGGCAATGACAGACGTAAATATCAAAGGTTACACGATTCCAAAAGGATGGAAGGTTTTTGCATCATTTCGTGCAGTACATTTGGACCATGAGCATTTCAAAGATGCTCGCACTTTTAACCCATGGAGATGGCAAAAGAATAGCTCGGGGGCAACGACACTAAATGCATTTACACCATTTGGTGGAGGTCCAAGATTATGCCCAGGTTACGAGCTGGCCAGAGTAGAACTCTCTGTTTTCCTTCATCATCTTGTCACCCAATTTAGGTATTCATCTATCTCTGTCTTAAGCATAGTTTAA | 1365 | 46.37 | MAFFSFFFFLFSSVLASSLFFLFLRPTRFRRVRLPPGTLGLPLIGETLQLISAYKTENPEPFIDERVRRFGPVFTTHLFGEPTVFSADWETNRFILQNEEKLFECSYPGSISNLLGKHSLLLMKGSLHKRMHSLTMSFGNSSIIRDHLLVDVDRLIRLNLNSWTGRIFLMEEAKKITFELAVKQLMSFDRCEWTQNLMKEYLLVIEGFFTVPLPLFSSTYRRAIQARRKVAEQLGTVVRERRKESENGARKKDMLGALLAGEDALSDEQIVDFLLALLVAGYETTSTTMTLAVKFLTETPLALAQLQEEHEQIKARKKESDQQHLQWNDYKSMPFTQCVVNETLRVANIISGVFRRAMTDVNIKGYTIPKGWKVFASFRAVHLDHEHFKDARTFNPWRWQKNSSGATTLNAFTPFGGGPRLCPGYELARVELSVFLHHLVTQFRYSSISVLSIV | 454 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 7 | 5905717 | 5912463 | + | CrPI670011_07g007660.1 | Cre07g0766 | 503347 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cre07g0766 | 454 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 415 | 424 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Cre07g0766 | 454 | CDD | CYP90-like | 66 | 448 | - | - | |
| Cre07g0766 | 454 | PANTHER | CYTOCHROME P450 26 | 33 | 443 | - | GO:0004497(PANTHER)|GO:0007275(PANTHER)|GO:0010268(PANTHER)|GO:0016125(PANTHER)|GO:0016132(PANTHER)|GO:0016491(PANTHER) | |
| Cre07g0766 | 454 | PRINTS | E-class P450 group I signature | 269 | 286 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre07g0766 | 454 | PRINTS | E-class P450 group I signature | 67 | 86 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre07g0766 | 454 | PRINTS | E-class P450 group I signature | 289 | 315 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre07g0766 | 454 | PRINTS | E-class P450 group I signature | 422 | 445 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre07g0766 | 454 | PRINTS | E-class P450 group I signature | 377 | 401 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre07g0766 | 454 | PRINTS | E-class P450 group I signature | 412 | 422 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre07g0766 | 454 | PRINTS | E-class P450 group I signature | 337 | 355 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre07g0766 | 454 | Pfam | Cytochrome P450 | 209 | 446 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre07g0766 | 454 | Gene3D | Cytochrome P450 | 24 | 451 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre07g0766 | 454 | SUPERFAMILY | Cytochrome P450 | 28 | 446 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre07g0766 | 454 | Coils | Coil | 303 | 323 | - | - | |
| Cre07g0766 | 454 | PRINTS | P450 superfamily signature | 338 | 349 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre07g0766 | 454 | PRINTS | P450 superfamily signature | 413 | 422 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre07g0766 | 454 | PRINTS | P450 superfamily signature | 422 | 433 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre07g0766 | 454 | PRINTS | P450 superfamily signature | 280 | 297 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cre05g2177 | Cre-Chr5:33509965 | Cre07g0766 | Cre-Chr7:5905717 | 4.20E-75 | dispersed | |
| Cre07g0766 | Cre-Chr7:5905717 | Cre07g1284 | Cre-Chr7:26888916 | 2.00E-93 | dispersed | |
| Cre07g0766 | Cre-Chr7:5905717 | Cre09g0053 | Cre-Chr9:821641 | 6.70E-94 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cre07g0766 | K09588 | - | csv:101216594 | 781.556 |