Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre07g0772 ATGACGAATTTACCCTCTCCGGCCGTCGCCGTCACTGTCCTCACCCTCATCGCCTTCGTTTTCCCGTTGTTCCCGGCGATCCAAGCTCTCGGTTCAGCCTCAACCCTCGCCGTCAGCTACAGCTCCGGAACCGTCTGTGGCATCGTCGCCGAGCAGCCGACCCAAAGGATTTTGTGTTTCCGTGACGGTCAAACCATTTTTATTGAACCCCATATCTCCTTCTCCGCCGTATCCGGCGGCCGGAATACCTTCTGCGGTATAAGGTCCGGCGGTTACACCCTCCTCTGCTGGGACTTCGACTCGACCACCGCTACGTTTTCCCGGAGAAGACTTTACTACAGCCCCACCGTTCTTCTGGAGAATCTCGCGGTCGGCGACGAGCAAATCTGCGCCACGTTGGTTGGCGCCGGCAATGTAACTTGCTGGCGAGAAGGTAACAACGCGAGTGTTGGATTTTCTTCTCTTCAATATGATTCAATCTCTTCTGGGTATGGGTTTTCTTGTGGGATTTTGAAAGGGAGTCAATCCATCCGATGTTGGGGTAGAAATTCGTCGATTGCAACCGTAATCGAAAATGGGTTTCGAAATATTTCAATGTTGAGCATCGTGGCCGGTGGGTTTCATGCCTGTGGATTGAATTCCTCTGGTGGGTTGGTTTGTAAAGGGAATAACGATTTTGGGCAGTTGGATTTTCCTTCAAATTCATCCATGGGGTTCTCTGAATTAGCACTCGGTGAACGCCATAGCTGTGGGATTTTAGTCTCGAATGGATCAGTAGTTTGTTGGGGCGGCTTGGGATTCTCTGTTGATTCGATTCGAGAAACTTCTTTTGAGTTAATTTCTTCAGGATCTGATTTTGTTTGTGGTTTAACGACGAGTAATTTCTCTGTTCTTTGTTGGGGGCCTGGTTGGTCCAATGATTCTTTCGGTCTTTCTTCACTTTCTCTTCCCAAGATTCTTCCTGGTCCTTGTGTTCAATCTTCTTGTAGTGATTGTGGGGTTTATCCTTTATCTCAAACCCTCTGTTCTAATTCTGGGAATGTCTGTAATCGCTGTTTGTTTACTGCTTCAACGCCGCCACCGCCTCTGCCATCGTCTCCCCCTCCGCAGCAGCGGTTGCCACCGCCAACGGTGAAGGCCGCGTCACCTCCGCCGGCTGCCTTGAGAAAGGGTTTGTTGGCATTTGGTATTGTGGGCTCAGTTGGTGCCTTTGCTGGGATTTGCACTATTGTTTACTGTTTGTGGACTGGTGCTTGTTTTGGGCATAAGAAGATACATAACTCTGTTCAGCCTACCATCACTAGAGCTGCTAGTTCGAATGGTGGAACGACGACTTCAAACACAAACAACAGCCCTCCGTCTCGGTCGTTGACGATACGACGTCAAGGCTCACGGATAATGCGAAGGCAGAGGAGTGGCACCTCATCTAAGCATGCCGATAGAGCAGAAGAATTCACTCTAGCAGAGCTTGCTATCGCTACCAATGATTTCTCTCCTGAGAACAAGATTGGTGAGGGGAGCTTCGGTGTCGTGTACCGAGGGAAACTGTACGATGGCCGGGAAGTTGCGATCAAGAGAGGCGAAACAGGGCCGAAAACTAAGAAGTTTCAGGAGAAAGAGAGTGCTTTTGATTCAGAATTGGCATTCTTGTCTCGGCTTCATCACAAGCATTTGGTTAGGCTTGTTGGGTATTGTGAGGAGAAAGATGAGAGACTGTTGGTTTATGAGTATATGAAAAATGGTGCACTTTATAATCATCTTCATGACAAGAACAATTTTGAGAAAGCCAGCAGTGTTATAAACTCTTGGAAAATGAGGATCAAAATTGCTTTAGATGCAGCTAGAGGGATTGAATATCTTCACAACTATGCAGTCCCTCCCATAATCCATAGAGATATCAAATCATCCAACATTCTCCTCGACGCGAATTGGACGGCGAGAGTATCTGACTTCGGGTTGTCATTGATGAGTCCAGGGTCGGACCGTGACTACCGACCAACAAAGGCAGCTGGGACAGTTGGTTACATTGATCCAGAGTACTATGGACTGAATGTTTTGACTGCTAAGAGTGATGTGTATGGGCTTGGGGTGGTGTTGTTGGAGCTTTTGACAGGGAAGAGAGCTATATTTAAGGATGATGAACAAGGAGGGACACCGGTCAGCGTGGTCGATTATGCGGTGCCTGTGATTATGGTTGGAGAATTGGTGAAGATTTTGGATCAGAGAGTTGGGCCACCACAGATGAACGAAGCGGAGGCGGTGGAGCTGGTGGCTTACACAGCGATGCATAGTGTGCATTTGGAAGGGAAAGATCGGCCGACGATGACCGACATTGTTGCTAATTTGGAACGAGCTTTGAATCTTTGTGATGATAGCTATGGTAGCATCTCTAGTGGTGGCATTTCCATTGTTTCAGAGTGA 2421 48.2 MTNLPSPAVAVTVLTLIAFVFPLFPAIQALGSASTLAVSYSSGTVCGIVAEQPTQRILCFRDGQTIFIEPHISFSAVSGGRNTFCGIRSGGYTLLCWDFDSTTATFSRRRLYYSPTVLLENLAVGDEQICATLVGAGNVTCWREGNNASVGFSSLQYDSISSGYGFSCGILKGSQSIRCWGRNSSIATVIENGFRNISMLSIVAGGFHACGLNSSGGLVCKGNNDFGQLDFPSNSSMGFSELALGERHSCGILVSNGSVVCWGGLGFSVDSIRETSFELISSGSDFVCGLTTSNFSVLCWGPGWSNDSFGLSSLSLPKILPGPCVQSSCSDCGVYPLSQTLCSNSGNVCNRCLFTASTPPPPLPSSPPPQQRLPPPTVKAASPPPAALRKGLLAFGIVGSVGAFAGICTIVYCLWTGACFGHKKIHNSVQPTITRAASSNGGTTTSNTNNSPPSRSLTIRRQGSRIMRRQRSGTSSKHADRAEEFTLAELAIATNDFSPENKIGEGSFGVVYRGKLYDGREVAIKRGETGPKTKKFQEKESAFDSELAFLSRLHHKHLVRLVGYCEEKDERLLVYEYMKNGALYNHLHDKNNFEKASSVINSWKMRIKIALDAARGIEYLHNYAVPPIIHRDIKSSNILLDANWTARVSDFGLSLMSPGSDRDYRPTKAAGTVGYIDPEYYGLNVLTAKSDVYGLGVVLLELLTGKRAIFKDDEQGGTPVSVVDYAVPVIMVGELVKILDQRVGPPQMNEAEAVELVAYTAMHSVHLEGKDRPTMTDIVANLERALNLCDDSYGSISSGGISIVSE 806
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 6051053 6053473 - CrPI670011_07g007720.1 Cre07g0772 503353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre07g0772 806 ProSitePatterns Serine/Threonine protein kinases active-site signature. 628 640 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cre07g0772 806 SUPERFAMILY RCC1/BLIP-II 73 304 IPR009091 -
Cre07g0772 806 MobiDBLite consensus disorder prediction 436 480 - -
Cre07g0772 806 ProSiteProfiles Protein kinase domain profile. 497 786 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cre07g0772 806 FunFam Serine/threonine-protein kinase-like protein CCR4 578 798 - -
Cre07g0772 806 Gene3D - 121 312 IPR009091 -
Cre07g0772 806 SUPERFAMILY Protein kinase-like (PK-like) 478 782 IPR011009 -
Cre07g0772 806 Gene3D Phosphorylase Kinase; domain 1 459 577 - -
Cre07g0772 806 Gene3D Transferase(Phosphotransferase) domain 1 578 794 - -
Cre07g0772 806 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN CCR4 33 795 IPR044815 GO:0004674(InterPro)
Cre07g0772 806 Pfam Regulator of chromosome condensation (RCC1) repeat 201 228 - -
Cre07g0772 806 Pfam Protein kinase domain 499 779 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cre07g0772 806 MobiDBLite consensus disorder prediction 360 382 - -
Cre07g0772 806 SMART serkin_6 497 786 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cre07g0772 806 MobiDBLite consensus disorder prediction 436 461 - -
Cre07g0772 806 ProSitePatterns Protein kinases ATP-binding region signature. 503 525 IPR017441 GO:0005524(InterPro)
Cre07g0772 806 FunFam serine/threonine-protein kinase-like protein CCR1 466 577 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre03g0388 Cre-Chr3:2348245 Cre07g0772 Cre-Chr7:6051053 8.00E-177 dispersed
Cre04g0987 Cre-Chr4:28458511 Cre07g0772 Cre-Chr7:6051053 2.40E-53 dispersed
Cre07g0772 Cre-Chr7:6051053 Cre08g0225 Cre-Chr8:5852521 7.20E-99 dispersed
Cre07g0772 Cre-Chr7:6051053 Cre04g0723 Cre-Chr4:25370642 4.30E-59 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
64256 PF00069 Pkinase 1.40E-44 CL0016 Cre PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre07g0772 - - - 0.0