Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre07g0784 ATGTTCGCAGTTGCAGTGCCGAAGACGACGATGACTCCGTTATTCTCATCTCCAAAGCTCCCTTCACTACTCTACAAGTCCTCCTCTCTCAATTCTTCTTCTTCTTCTTCTTCTTCTTCGTCTTCTTCGCCGAGATCGTTGTCCAGTCCGAGGAACCTTCATGTTTCTGCATCGTCGTCGCCGTCGTCTGTTGATACGGTTTTGAAGAGGAAGAGGCCGGCGAGAATCGACGTGCCGCCGAGTATGCCGTCGATTGGATTTGAATTTGGAGTATTCGAGACGCCGGAGGTGATGGAGGAGGAAGGAGAAGGATATTCTGTTTATTGTAAAAGAGGAAGAAGACGGATCAGCGCTATGGAGGATCGATTCTCAGCTACCGTCGGAATTCAAGGAGATTCTCGCCAGGCTTTCTTCGGAGTTTTCGACGGACACGGCGGAGCAAAAGTGGCGGAAATCGCAGCGAAAAGAATGAGCGAGAATGTAATCGATCAAGTAACGAGAAGAACAGAGTCGGAACTGGAGGAAGCAATCAAAGACGGCTATCTGACGACGGATCGGGAAGTATCGGAGGAAGGCGTGAGCGGCGGCGGCGCTTGTTGCGTGACTGCATTGATACGGAACGGAAATCTGGCAGTCTCGAACGTTGGCGATTGTCGTGCTGTGTTGAGCAGAAAGGGAAAAGCGGAAGCCCTAACTTCGGATCACAGGGCGTGCAGAGAAGACGAGAGAAATCGGATCGAAAAATCGGGAGGTTATGTAGATTGTTGCGGTGGTGGATGGAGAGTTCAAGGAACACTGGCTGTATCTCGAGCCATCGGAGACGAGCATCTGAAACAGTGGGTGATATCGGAGCCGGAGACGAGAGTGATGAAGATCGAGGATGATTGTCATTTCTTGATCCTTGCTTCTGATGGTCTTTGGGACAAGGTTACAAATCAGGAAGCAGTAGACATAGTAGAGGCAGTATGCGGCGTAGAGATAATGAAGAAGAAACCAAATCCGGCATTAATAATGTCGGCCTGCAAACAGTTGGCGACTTTGTCAACATCAAGAGGCTCAATCGACGATACCACTGTTATGATCATCAAACTAAATTCCCTTTTTCATTCCTCAACCTCAATTAATCATCATCATTAA 1137 48.64 MFAVAVPKTTMTPLFSSPKLPSLLYKSSSLNSSSSSSSSSSSSPRSLSSPRNLHVSASSSPSSVDTVLKRKRPARIDVPPSMPSIGFEFGVFETPEVMEEEGEGYSVYCKRGRRRISAMEDRFSATVGIQGDSRQAFFGVFDGHGGAKVAEIAAKRMSENVIDQVTRRTESELEEAIKDGYLTTDREVSEEGVSGGGACCVTALIRNGNLAVSNVGDCRAVLSRKGKAEALTSDHRACREDERNRIEKSGGYVDCCGGGWRVQGTLAVSRAIGDEHLKQWVISEPETRVMKIEDDCHFLILASDGLWDKVTNQEAVDIVEAVCGVEIMKKKPNPALIMSACKQLATLSTSRGSIDDTTVMIIKLNSLFHSSTSINHHH 378
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 6471288 6473300 + CrPI670011_07g007840.1 Cre07g0784 503365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre07g0784 378 SMART PP2C_4 97 362 IPR001932 -
Cre07g0784 378 MobiDBLite consensus disorder prediction 26 66 - -
Cre07g0784 378 MobiDBLite consensus disorder prediction 1 20 - -
Cre07g0784 378 MobiDBLite consensus disorder prediction 26 75 - -
Cre07g0784 378 CDD PP2Cc 104 364 IPR001932 -
Cre07g0784 378 Gene3D - 98 371 IPR036457 -
Cre07g0784 378 ProSitePatterns PPM-type phosphatase domain signature. 137 145 IPR000222 GO:0043169(InterPro)
Cre07g0784 378 Pfam Protein phosphatase 2C 114 355 IPR001932 -
Cre07g0784 378 PANTHER PROTEIN PHOSPHATASE 96 362 IPR015655 GO:0004722(PANTHER)|GO:0004722(InterPro)|GO:0006470(InterPro)|GO:0035970(PANTHER)
Cre07g0784 378 ProSiteProfiles PPM-type phosphatase domain profile. 104 364 IPR001932 -
Cre07g0784 378 SUPERFAMILY PP2C-like 104 366 IPR036457 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre03g0380 Cre-Chr3:2228184 Cre07g0784 Cre-Chr7:6471288 1.50E-94 dispersed
Cre07g0784 Cre-Chr7:6471288 Cre11g1291 Cre-Chr11:11882183 1.80E-68 dispersed
Cre07g0784 Cre-Chr7:6471288 Cre03g0435 Cre-Chr3:2773531 2.60E-30 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre07g0784 K17506 - csv:101208170 543.888