Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cre07g0805 | ATGGGTGGCAATTCACCGTGCGCCTCGTGCAAACTCCTCCGGCGACGGTGTGCCAAAGACTGCATTTTTGCTCCCTATTTTCCCTCTGATGACCCCCACAAGTTTGCTATTGTCCATAAAGTTTTTGGTGCCAGCAATGTCAGCAAAATGTTGCAGGAACTGCCAGTGCAGCAAAGAGGCGACGCCGTGATGAGTTTAGTTTATGAGGCAAGTGCAAGAGTGAGGGACCCAGTTTATGGTTGTGTAGGGGCAATTTCGTACTTACAAAATCAAGTTTCACAACTACAAATGCAATTGGCTGTGGCTCAAGCTGAGATTCTTTGCATCCAAATGCAACAAGACAACCCCGTTTTCCCAAATTGCCCTCAGATCCACTCCGATGACAAACCCTCCTCTCTTCTACTCCCGCCGCCGTCTCCTCCGCCCTCTCAGTGCCTCAATTTTGCTTCCTCTCCCAATGTAATTTATGACACCATTTTTGGACATGACATAGTTTCTTAA | 501 | 47.7 | MGGNSPCASCKLLRRRCAKDCIFAPYFPSDDPHKFAIVHKVFGASNVSKMLQELPVQQRGDAVMSLVYEASARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILCIQMQQDNPVFPNCPQIHSDDKPSSLLLPPPSPPPSQCLNFASSPNVIYDTIFGHDIVS | 166 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 6832827 | 6833806 | + | CrPI670011_07g008050.1 | Cre07g0805 | 503386 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cre07g0805 | 166 | Coils | Coil | 85 | 105 | - | - | |
Cre07g0805 | 166 | ProSiteProfiles | LOB domain profile. | 5 | 106 | IPR004883 | - | |
Cre07g0805 | 166 | PANTHER | LOB DOMAIN-CONTAINING PROTEIN 4-RELATED | 4 | 115 | - | - | |
Cre07g0805 | 166 | Pfam | Lateral organ boundaries (LOB) domain | 6 | 103 | IPR004883 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cre02g2163 | Cre-Chr2:35235154 | Cre07g0805 | Cre-Chr7:6832827 | 2.90E-45 | dispersed | |
Cre03g0548 | Cre-Chr3:4224671 | Cre07g0805 | Cre-Chr7:6832827 | 3.20E-36 | dispersed | |
Cre03g0550 | Cre-Chr3:4254034 | Cre07g0805 | Cre-Chr7:6832827 | 9.80E-37 | dispersed | |
Cre07g0805 | Cre-Chr7:6832827 | Cre09g1636 | Cre-Chr9:33675716 | 4.00E-44 | dispersed | |
Cre04g2098 | Cre-Chr4:38216030 | Cre07g0805 | Cre-Chr7:6832827 | 4.80E-31 | transposed | |
Cre05g0966 | Cre-Chr5:8888631 | Cre07g0805 | Cre-Chr7:6832827 | 2.60E-31 | transposed | |
Cre02g2240 | Cre-Chr2:36019568 | Cre07g0805 | Cre-Chr7:6832827 | 1.40E-49 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
54009 | PF03195 | LOB | 3.70E-42 | No_clan | Cre | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cre07g0805 | - | - | - | 0.0 |