Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre07g0857 ATGGCAGCACAAGATCTTCCAGAAGCAAGGGCAGCCCTCAGCCTCCTCCGCAGTAGACTCTGCAACTCTAGTTTCTATTTCAAACCTCCATCCGATTCTTCTGATAGCAATTACAGCAAATTGAAGTTTATAATATCCAGTTCGGTGGCTGAAGCGTGTAATAATTCGATCCTGCTTCTCGGCCCCCGGGGTTCAGGGAAAATGGCGGTGCTGGAACTCGTTCTACAAGATCTATTGCTAGAATATCCCGATATGATTACCGTGATAAAATTGAGTGGTCTTTTGCATTGTGACGACAATGGTGCCTTCAAGGAGATTGCTAGGCAGCTTTGTTCAGAGTATCAATTATTGTTCTCAAAACTGGCATCCTTCGACGATAACTCCCAGTTTATGATAGCCATGCTTCGGGAGTGTGGCTTGGCACACAAGACAATTGTTTTTGTACTCGATGAATTTGATCTTTTTGCACAAGGAAAACAACGGTTACTTTATAGTTTGTTAGATGCCATGCAATCAGTGTCATCACAAGCTGTTGTTATTGGCATCAGTTGTCGATTGGATGCTGATCAGCTACTCGAGAAAAGAGTAAGATCTCGGTTCTCCCATAGAAAGCTGTTATTTCTTCCTCCCTGCAAGGAAGATGTGGAGAGATTGCTGGAGCACATTTTAACATTGCCAATAGACTCGGACCTTCCTCATGACTACATTATTAAATTTAATGCAAAGCTTCATAATATGTTAGCAAATGAGAGATTTAAAAAGATCATTAACACTTATTTGGACTCTGATTCGACCGTCAAACAATTAGTGAGATATCTGTTTTGTGCCATATCAAAGATGGACTTGAAATCTGGGTTGCTGACCCTTGAGAATTTTGAACATGCTCTTTCGGATATTCAGAGGCAGCCAAAGCAGGAATATATAAAAGATTGTTCCATATTGGAGCTCTATATTCTGGTATGCATGAAAAGGTTGGAAGTTAAGGAGCAGAATTCGTATAACTTCAATTCTGTAATGAAAGAGTATAAGAGTATACATGATTCATTCCGGACATCTGATTATTATTCACGAAGTGTATGCTTACGGGCTTTTGAGCACCTTCTACAGCGTGAATTGATCTGTTTCACTGACAACCGTGGACATAATCAATCAGTTGAATTTCGACCAGTCAAGCTGTTAATAACATCTCATGAACTACATCATGGACTGAAGGCATATCGTTCATGTCCTGTGTTCTGGGACTCCAGACCTTTCGTCTTGTTCAAGGAGGCTCAGATCAGCGGTAAGGCCCTTATGCGAATGTCCTTTTCGGTTAGTTTTGGGCTAGGTTTGACGATTACTCAGCTCATTCCTAGAGTTAGAGGTCCGAATGTTGCTAGAGGAAAGCTGAGATTGTGGTTGATTACTACTAAAGGGTAG 1419 41.23 MAAQDLPEARAALSLLRSRLCNSSFYFKPPSDSSDSNYSKLKFIISSSVAEACNNSILLLGPRGSGKMAVLELVLQDLLLEYPDMITVIKLSGLLHCDDNGAFKEIARQLCSEYQLLFSKLASFDDNSQFMIAMLRECGLAHKTIVFVLDEFDLFAQGKQRLLYSLLDAMQSVSSQAVVIGISCRLDADQLLEKRVRSRFSHRKLLFLPPCKEDVERLLEHILTLPIDSDLPHDYIIKFNAKLHNMLANERFKKIINTYLDSDSTVKQLVRYLFCAISKMDLKSGLLTLENFEHALSDIQRQPKQEYIKDCSILELYILVCMKRLEVKEQNSYNFNSVMKEYKSIHDSFRTSDYYSRSVCLRAFEHLLQRELICFTDNRGHNQSVEFRPVKLLITSHELHHGLKAYRSCPVFWDSRPFVLFKEAQISGKALMRMSFSVSFGLGLTITQLIPRVRGPNVARGKLRLWLITTKG 472
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 7173345 7178446 + CrPI670011_07g008570.1 Cre07g0857 503438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre07g0857 472 PANTHER ORIGIN RECOGNITION COMPLEX SUBUNIT 4 9 410 IPR016527 GO:0000808(InterPro)|GO:0003677(InterPro)|GO:0003688(PANTHER)|GO:0005634(InterPro)|GO:0005664(PANTHER)|GO:0006260(InterPro)|GO:0006270(PANTHER)
Cre07g0857 472 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 43 300 IPR027417 -
Cre07g0857 472 Gene3D - 34 209 IPR027417 -
Cre07g0857 472 FunFam Origin of replication complex subunit 4 35 209 - -
Cre07g0857 472 Pfam AAA domain 55 181 IPR049945 GO:0016887(InterPro)
Cre07g0857 472 PIRSF ORC4 5 413 IPR016527 GO:0000808(InterPro)|GO:0003677(InterPro)|GO:0005634(InterPro)|GO:0006260(InterPro)
Cre07g0857 472 Pfam Origin recognition complex (ORC) subunit 4 C-terminus 218 402 IPR032705 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre07g0857 K02606 - csv:101220845 771.926