Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre07g0881 ATGTCCAAAGAAAGAGAGAGATTCGACGAGATAGCGAAGAAGATAAAGAGAGAGACAGATGTATCATCAAATATTCATCCCCAGCAAATTATGGGGAGAAGAACCTCATTGCAAGCTCCTCCTGGGACACTTAACACCATTACCCCATGTGCAGCCTGCAAGCTCTTAAGAAGAAGATGTGCTCAAGAATGCCCCTTCTCCCCATACTTCTCCCCTCATGAGCCTCATAAATTTGCCTCTGTCCACAAGGTTTTCGGCGCTAGCAACGTCTCCAAGATGCTCATGGAAGTTTCAGAGAATCAGAGAGCGGATGCTGCGAATAGCTTAGTTTATGAAGCTAATGTGAGGTTAAGAGATCCTGTTTATGGCTGTATGGGCGCCATTTCAGCCCTACAACACCAAATTCAAGCCTTACAAGTTGAGCTCAATGCGGTGAGAGCTGAGATTTTAAGACACAAATTTAGAGAAGCTAATAATATGATTCACTCTTCTCCTCAACAACAACATTTGCCTTTTCTTTCTTCTTCTACGGAGGTCGTTTCGGTCGCCGTGCCACCACCGCCTCCGCCACCACCGCTACCTCCACCGCCTCATCATGATGCTTCTTCTTCTACTTCCTCCTTGTACAACCGACCGGTGGTGGCCGTGGCGGCTGACTATAGTACTATTTCAAGTGATGAAAATGTTACCTACTTTGTTACTACTTCTAGTACTGCTCATCAATTGAATTCTTAG 735 45.44 MSKERERFDEIAKKIKRETDVSSNIHPQQIMGRRTSLQAPPGTLNTITPCAACKLLRRRCAQECPFSPYFSPHEPHKFASVHKVFGASNVSKMLMEVSENQRADAANSLVYEANVRLRDPVYGCMGAISALQHQIQALQVELNAVRAEILRHKFREANNMIHSSPQQQHLPFLSSSTEVVSVAVPPPPPPPPLPPPPHHDASSSTSSLYNRPVVAVAADYSTISSDENVTYFVTTSSTAHQLNS 244
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 7515089 7516359 + CrPI670011_07g008810.1 Cre07g0881 503462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre07g0881 244 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 47 169 - -
Cre07g0881 244 MobiDBLite consensus disorder prediction 182 199 - -
Cre07g0881 244 Pfam Lateral organ boundaries (LOB) domain 49 146 IPR004883 -
Cre07g0881 244 MobiDBLite consensus disorder prediction 178 207 - -
Cre07g0881 244 Coils Coil 128 148 - -
Cre07g0881 244 ProSiteProfiles LOB domain profile. 48 149 IPR004883 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre07g0881 Cre-Chr7:7515089 Cre09g1636 Cre-Chr9:33675716 4.00E-37 dispersed
Cre11g1062 Cre-Chr11:8056520 Cre07g0881 Cre-Chr7:7515089 2.30E-58 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
54011 PF03195 LOB 3.80E-40 No_clan Cre TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre07g0881 - - - 0.0