Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre07g0885 ATGGATCTTGAGCATGGGAAGTGTTGGGATAGTTCAAAGAAGGATTCTTGGAAAACGGTTCTTGTATTGGCCTATCAAAGCCTTGGTGTCGTCTATGGCGATTTGAGCATCTCTCCTCTTTACGTTTACAGAAGCACTTTTGCTGAAGACATCCAACATTCAGATACCAATGAAGAAATCTATGGTGTTCTTTCATTTGTCTTCTGGACTCTCACTATAGTCCCCCTTTTCAAATACGTCTTTGTGGTTCTCAGAGCTGATGACAATGGCGAAGGTGGGACTTTTGCTCTGTACTCGTTAATTTGTAGACATGCCAAAGTAAGCCTTCTCCCCAACAGACAAGTTGCAGATGAAGCTCTTTCCACTTACTTGCTGGAACATCCACCAGAGAAGAAGAAGCAATCTAAGGTTAAATTGCTGCTGGAGAAGCACAGAGCTCTTCACACTTCCTTGTTGATTCTTGTTCTTCTAGGTACTTGTATGGTGATTGGAGACGGGCTTCTCACTCCTGCCATTTCTGTTTTCTCAGCAGTTTCTGGACTTGAGTTATCCATGTCCAAGGCTCACCATGAGTATGCAGTGGTTCCAATCACTTGCTTTATCTTGGTTTGTCTATTTGCACTTCAACACTACGGCACACATCGAGTTGGTTTTGTATTTGCCCCCATTGTATTGGCATGGCTACTCTGCATCAGCACCCTTGGCATATACAATATTATACACTGGAATCCACGTGTTTATCAGGCTCTTTCTCCATATTACATGTTCAAGTTTTTGGAGAAGACAAGGAAGAGCGGTTGGATGTCGTTGGGGGGTATATTGTTGTGCATAACAGGCTCAGAAGCAATGTTTGCTGATCTTGGTCACTTCTCATACACTGCAATACAGATTGCTTTCACTTTCCTGGTGTATCCAGCGCTTATATTGGCATACATGGGCCAAGCTGCTTACTTATCACAACATCACCATACCACCAAAAACATTGGCTTCTACGTTTCTGTTCCAGAGAGTGTGAGATGGCCAGTGCTTACAATTGCTATACTTGCGTCGGTTGTGGGAAGCCAAGCAATCATCAGCGGAACATTCTCCATTATTAACCAGAGCCAGTCCCTTGGGTGCTTCCCTAGAGTGAAGGTTGTTCATACTTCTGATAAGATCCATGGCCAGATATACATTCCAGAGATAAATTGGATTCTTATGATTCTCTGTGTCGCCGTTACCATTGGATTTAGGGACATAAAACACCTTGGAAATGCTTCAGGTCTGGCTGTAATGACTGTGATGCTTGTGACAACCTGTCTTACATCTTTGGTGATTGTCCTGTGTTGGAACAAATCTCCACTCTTGGCTCTCTCCTTTTTGATATTCTTTGGGTCTGTTGAATTGCTCTACTTCTCAGCTTCACTCACCAAGTTCAGGGAGGGCGCTTGGCTCCCCATTCTTTTAGCTCTCTTCCTCATGACCATCATGTTTGTTTGGCACTATGCAACCATCAAGAAGTATGAATTTGATCTTCACAACAAGGTTTCATTAGAATGGTTACTAGCATTGGGGCCAAGCCTTGGGATTGCACGTGTCCCCGGCATTGGATTAGTCTTCACTGATCTCACTTCTGGCATCCCTGCCAACTTCTCTCGGTTTGTCACCAACCTCCCGGCATTTCATCGGATTCTTGTCTTTGTATGCATAAAGTCAGTACCAGTTCCTTTCGTACCTCCAGCTGAGAGATATCTCGTGGGAAGAGTTGGCCCAGCTACGCATCGATCGTACAGGTGCATTGTTCGGTATGGCTACCGTGATGTTCACCAGGACGTGGACTCATTTGAGTCTGAATTAGTCACGAAACTTGCAGACTTCATCCGCTATGATTGGTTCAGAAAGCAAAGAGGCAACTCTTGCAGTGAGGATGATGCATCCCGTTCAAATGAATCGACAAGTGAGTGCAAGCTGGCTGTGATTGGAACCATAGCATTTGCAGGTGCAACTGCCTATGAAGAGACTGTGCAGCCTGCAAGCGTATCAGTTGGGTTCCAAACTGTTGACAGCATCGGTGATGTGATTGAAATGGAGCCACCGGGAGAAGAAAGAAGAGTCAGGTTTGCCATAGATGACGAATTTGAATGTGGCTCACGAGCTGAAACAGAAGCCCTTCTGCAAGAAGAACTAGAAGATCTTGTAGCAGCCCAGCAATCAGGGACAGCGTTCATTCTCGGGCATTCACACGTCCGGGCAAAGCAAGGATCGTCTCTGTTGAAGAGACTGGCCATTAACTATGGCTACAACTTCCTAAGAAGGAATTGCAGAGGAGCAGATGTTGCTCTTAAGGTGCCACCAGTTTCTCTTCTTGAAGTTGGCATGGTTTATGTTGTATAA 2373 44.96 MDLEHGKCWDSSKKDSWKTVLVLAYQSLGVVYGDLSISPLYVYRSTFAEDIQHSDTNEEIYGVLSFVFWTLTIVPLFKYVFVVLRADDNGEGGTFALYSLICRHAKVSLLPNRQVADEALSTYLLEHPPEKKKQSKVKLLLEKHRALHTSLLILVLLGTCMVIGDGLLTPAISVFSAVSGLELSMSKAHHEYAVVPITCFILVCLFALQHYGTHRVGFVFAPIVLAWLLCISTLGIYNIIHWNPRVYQALSPYYMFKFLEKTRKSGWMSLGGILLCITGSEAMFADLGHFSYTAIQIAFTFLVYPALILAYMGQAAYLSQHHHTTKNIGFYVSVPESVRWPVLTIAILASVVGSQAIISGTFSIINQSQSLGCFPRVKVVHTSDKIHGQIYIPEINWILMILCVAVTIGFRDIKHLGNASGLAVMTVMLVTTCLTSLVIVLCWNKSPLLALSFLIFFGSVELLYFSASLTKFREGAWLPILLALFLMTIMFVWHYATIKKYEFDLHNKVSLEWLLALGPSLGIARVPGIGLVFTDLTSGIPANFSRFVTNLPAFHRILVFVCIKSVPVPFVPPAERYLVGRVGPATHRSYRCIVRYGYRDVHQDVDSFESELVTKLADFIRYDWFRKQRGNSCSEDDASRSNESTSECKLAVIGTIAFAGATAYEETVQPASVSVGFQTVDSIGDVIEMEPPGEERRVRFAIDDEFECGSRAETEALLQEELEDLVAAQQSGTAFILGHSHVRAKQGSSLLKRLAINYGYNFLRRNCRGADVALKVPPVSLLEVGMVYVV 790
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 7660789 7666324 - CrPI670011_07g008850.1 Cre07g0885 503466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre07g0885 790 NCBIfam potassium uptake protein 23 789 IPR003855 GO:0015079(InterPro)|GO:0016020(InterPro)|GO:0071805(InterPro)
Cre07g0885 790 Pfam K+ potassium transporter integral membrane domain 23 515 IPR053951 -
Cre07g0885 790 Coils Coil 711 731 - -
Cre07g0885 790 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 11 789 IPR003855 GO:0005886(PANTHER)|GO:0006813(PANTHER)|GO:0015079(InterPro)|GO:0015079(PANTHER)|GO:0016020(PANTHER)|GO:0016020(InterPro)|GO:0071805(InterPro)
Cre07g0885 790 Pfam K+ potassium transporter C-terminal domain 527 788 IPR053952 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre01g0568 Cre-Chr1:4987854 Cre07g0885 Cre-Chr7:7660789 6.60E-278 dispersed
Cre05g1412 Cre-Chr5:16837140 Cre07g0885 Cre-Chr7:7660789 9.20E-235 dispersed
Cre05g2687 Cre-Chr5:37815408 Cre07g0885 Cre-Chr7:7660789 1.20E-276 dispersed
Cre07g0885 Cre-Chr7:7660789 Cre11g0535 Cre-Chr11:2351729 9.30E-192 dispersed
Cre07g0885 Cre-Chr7:7660789 Cre10g1582 Cre-Chr10:29861172 7.60E-287 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre07g0885 K03549 - csv:101211022 1508.81