Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre07g0896 ATGGAACTCCCCAATTCCACTAATCAAATGGCTTCCTCTTCCAACCCCACCACCCCATTTCGCGGTTCCTTCCACCGTCGAGCCCATTCCGAGGTCCATTTCCGGATTCCCGATGATCTCGATCTTGTCTCCGACCCTTTCGACGCCCCTTCTTCTGGATTTGGAGATCTGGGCTTCGAGGATGATCTCTTGTGCACTTTCATGGACATCGAGAAGATCGGATCCAAAATCGACAATGGGCCTTCGTCGAATCCTGAAGTGGCTGGCGGCGGTACTGCGGCGGAGAATGTTGAAGGGGAGAAAATCTCCCGCCCCAGGCACCGTCATAGCAATTCTGCTGATGGGTCTTCTATTATGGAGTCTATTGAGGCTAAGAAGGCCATGGATCCTGATAAGCTCGCTGAGTTGTGGACAATTGATCCTAAACGTGCCAAAAGGATTTTGGCGAATAGACAGTCTGCTGCTCGGTCAAAAGAGAGAAAAGCTCGCTACATAATGGAACTTGAGAGAAAAGTTCAAAGCCTTCAGACCGAAGCGACAACGCTCTCTGCACAGCTCACGTTGTACCAGAGAGATACCACAGGGCTTTCAACAGAAAACTCAGAGCTCAAACTTCGTTTACAAGCTATGGAACAGCAAGCTCATCTACGCGATGCTCTAAATGAAGCTTTGAAAAAGGAAGTTGAGCGGCTCAAGATCGCAACTGGAGAAGTAATGACAGCTACAGATTCGTATAACTTTGGAATGCCTCAAGTTTCATATCCCCAATCTTGCTTCTCACACCAACCACAACCTGGGCGACACAACCCACAGAGGACGACGCAAGGGCCCCAAGTTCATCCATTCCATTCTAGTTTACCGAACCCACATCAGTCTTTGTTTGTTGCATCGCACCAGCCTCATGCCTTGACAGAAATGTTTCATCAAGATCCTATTAGCCGATTGCAGGGTCTCGACATCAGTAGCAGAGGCACAGAAATAAAGCCAGAAGGCTCCTCTATATCCGTAGGTGGGGCTAGAGAAATTACTAAATTGTCCACAGTTGAAGGGTTATTGGGGTCCCTCATGGGACTGCCATTAAAGGCCACATGGTAG 1095 48.77 MELPNSTNQMASSSNPTTPFRGSFHRRAHSEVHFRIPDDLDLVSDPFDAPSSGFGDLGFEDDLLCTFMDIEKIGSKIDNGPSSNPEVAGGGTAAENVEGEKISRPRHRHSNSADGSSIMESIEAKKAMDPDKLAELWTIDPKRAKRILANRQSAARSKERKARYIMELERKVQSLQTEATTLSAQLTLYQRDTTGLSTENSELKLRLQAMEQQAHLRDALNEALKKEVERLKIATGEVMTATDSYNFGMPQVSYPQSCFSHQPQPGRHNPQRTTQGPQVHPFHSSLPNPHQSLFVASHQPHALTEMFHQDPISRLQGLDISSRGTEIKPEGSSISVGGAREITKLSTVEGLLGSLMGLPLKATW 364
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 7970892 7976951 - CrPI670011_07g008960.1 Cre07g0896 503477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre07g0896 364 MobiDBLite consensus disorder prediction 1 21 - -
Cre07g0896 364 Coils Coil 158 185 - -
Cre07g0896 364 MobiDBLite consensus disorder prediction 76 115 - -
Cre07g0896 364 SUPERFAMILY Leucine zipper domain 142 193 IPR046347 GO:0003700(InterPro)|GO:0006355(InterPro)
Cre07g0896 364 FunFam probable transcription factor PosF21 141 194 - -
Cre07g0896 364 MobiDBLite consensus disorder prediction 99 113 - -
Cre07g0896 364 MobiDBLite consensus disorder prediction 258 279 - -
Cre07g0896 364 Coils Coil 217 237 - -
Cre07g0896 364 Gene3D - 141 194 - -
Cre07g0896 364 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 11 291 - GO:0003700(PANTHER)|GO:0005634(PANTHER)
Cre07g0896 364 CDD bZIP_plant_RF2 143 192 IPR044759 GO:0003700(InterPro)|GO:0006355(InterPro)
Cre07g0896 364 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 140 203 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Cre07g0896 364 SMART brlzneu 138 202 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Cre07g0896 364 MobiDBLite consensus disorder prediction 1 23 - -
Cre07g0896 364 Pfam bZIP transcription factor 142 196 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre02g2211 Cre-Chr2:35787316 Cre07g0896 Cre-Chr7:7970892 1.60E-72 dispersed
Cre05g0883 Cre-Chr5:7947826 Cre07g0896 Cre-Chr7:7970892 4.20E-50 dispersed
Cre05g0886 Cre-Chr5:7986999 Cre07g0896 Cre-Chr7:7970892 6.00E-41 dispersed
Cre07g0896 Cre-Chr7:7970892 Cre08g0642 Cre-Chr8:19356321 9.60E-51 dispersed
Cre07g0896 Cre-Chr7:7970892 Cre02g1236 Cre-Chr2:12535113 2.20E-10 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
54012 PF00170 bZIP_1 1.80E-08 CL0018 Cre TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre07g0896 - - - 0.0