Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre07g0899 ATGGCCAAGAAAATGATTGCAGTGTTTTTGATGTTCATTGTGGTGTTTGCCACTGCCAATGAGGATGAGGTGACCAAATATGAGGCCAAATTTGATGCCAAATACAAGTCTTGTTATGAAACTTGCGAGAAGGAATGCCTTGAAAATGGGAATGGCCAAAGCTTCTGTGAAGTTAAATGTGATGAAGATTGTGATGAAAAAGAAACTGCTGCCGCTCCCGCATCGATCGATTTTTCGGTTAAGATGCTTTACAGGGCCTTGCAGCAATTCCTTCCAATTTCCAAATTTGTTTCCATTGTTCCAAAGAACACACAGCCATCTGACCAAACCCAGAACACCCCTCTTCTCTTCACAACCTTACTCTCTCTCAAATTCTCCAATTCCCAATTTCCTTCATCTTCCCCTTTTCCGTTTTCACCAATTCCCACCTTCCTTCTCTCTCAAAACCCACCATGGCCGATTCCCGATAACACTCAATTTCCAATTCCATTCCAACCCCCAACACACACACACACAATGTCCTCCGAAGACATCAATGGCCTCAACTCCCAGCTCGTCTTCCAAGACGAAGCCCTCCCCTTCAATTGCTCCACCACGCCGCAGCGTCGTGTCCCCGACCCAGGTCCCAAAACCCGCGAACTCTGCGGTTTCATGGACGACAAGCTCTTCCCTGGCGTGGACCGAGACCGATTCTTTTCCCACCAGGGTGAAGATTTCCGCCGCAGTGTTTTCGGTCACACCCGGAATTGGAATGGGAATGGGACTGCGAGAACTGGAAGTGGGAAAGGATCGGATGAGGATGATGATGATGACGACGATGATGAAGATGAAGTCGATGATGGTGATGATGATGTTGAGGGGCTTGTTTCTTTGGATGATGTCAATAAGTGTACTAAAACTTCTATCCCCAACGACAGCAACAATGATAGAAGCGATCAGAGTAGTGAGGGCTTGAAGAATGGGACCAACAAATTGGGAAATGGGAAGCTTAAGCACCATTCTTCTTTTGGTGGAACTCTGTTAGTCAAGGATGGTTTAGTTGGCTCTTCAGGCAACAACACAGGAGCAACTCAGAGTGAGAACCATCCGCAGGGAAGGTTGGGGAACTACCCAAATGCTGTTACAATTGCAGAACCTGAAAGTGATGCTTATTATTCCCAGTATTTGCAAAGCACTGAAGTGTCTGCTTCTGGGCAGAAGGATTTGGGTATGGAAAATGGATGTGGTTTTGGGAGAAGGGATGTGTCGTTTTCAGGAGAGCCTGGAGAGTCTCTGAGAGCAATTCTCACTGACCCTGTGACGGGCGCTCTCATGGACGATGCAATGATATTGCCGTGTGGGCATTCCTTTGGAAGCGGTGGAATCCAACATGTTCTTAGAGTAAAATCTTGTTACTCATGCTCTCAGTCAGTTTCTGAAGACTCTATTGCTCAAAACTTATCTCTTCAAGCTGCAGTCCAAGCATTCCGCCGGGAAGAAGAATTAATATTTTACCGCTCACCGAAAAGGAGAAGGGAGAGGTTTGAGCAGGACAAGGGTGGTTATGGTGATTTGACTCTCATGGATACCACAAGAGGTCGAGGTGTTCAGTTTCCTTTCGCAGTGACTGATAGGGTAATTATCAAGGGGAACAAGAGGACACCGCAACGTTTTGTGGGACGTGAGGCTGTTGTTACAACACAGTGCTTGAATGGATGGTATGTGGTGAAAACACTAGACAATGCAGAGAGTGTAAAGTTGCAGTACCGCTCGCTTGCGAAGGTTCCAAATGATGCAACATCAAAGACGATAACAAGGAAGATCACACCAAATTGGCTTTAG 1821 46.46 MAKKMIAVFLMFIVVFATANEDEVTKYEAKFDAKYKSCYETCEKECLENGNGQSFCEVKCDEDCDEKETAAAPASIDFSVKMLYRALQQFLPISKFVSIVPKNTQPSDQTQNTPLLFTTLLSLKFSNSQFPSSSPFPFSPIPTFLLSQNPPWPIPDNTQFPIPFQPPTHTHTMSSEDINGLNSQLVFQDEALPFNCSTTPQRRVPDPGPKTRELCGFMDDKLFPGVDRDRFFSHQGEDFRRSVFGHTRNWNGNGTARTGSGKGSDEDDDDDDDDEDEVDDGDDDVEGLVSLDDVNKCTKTSIPNDSNNDRSDQSSEGLKNGTNKLGNGKLKHHSSFGGTLLVKDGLVGSSGNNTGATQSENHPQGRLGNYPNAVTIAEPESDAYYSQYLQSTEVSASGQKDLGMENGCGFGRRDVSFSGEPGESLRAILTDPVTGALMDDAMILPCGHSFGSGGIQHVLRVKSCYSCSQSVSEDSIAQNLSLQAAVQAFRREEELIFYRSPKRRRERFEQDKGGYGDLTLMDTTRGRGVQFPFAVTDRVIIKGNKRTPQRFVGREAVVTTQCLNGWYVVKTLDNAESVKLQYRSLAKVPNDATSKTITRKITPNWL 606
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 8081280 8089568 - CrPI670011_07g008990.1 Cre07g0899 503480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre07g0899 606 Gene3D Pollen allergen ole e 6 32 76 IPR036466 -
Cre07g0899 606 MobiDBLite consensus disorder prediction 244 331 - -
Cre07g0899 606 ProSiteProfiles U-box domain profile. 424 496 IPR003613 GO:0004842(InterPro)|GO:0016567(InterPro)
Cre07g0899 606 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 62-RELATED 181 597 - -
Cre07g0899 606 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 423 495 IPR013083 -
Cre07g0899 606 MobiDBLite consensus disorder prediction 294 322 - -
Cre07g0899 606 MobiDBLite consensus disorder prediction 265 288 - -
Cre07g0899 606 MobiDBLite consensus disorder prediction 347 368 - -
Cre07g0899 606 SUPERFAMILY RING/U-box 424 496 - -
Cre07g0899 606 Pfam Pollen allergen Ole e 6 38 69 IPR015333 -
Cre07g0899 606 SUPERFAMILY Pollen allergen ole e 6 32 69 IPR036466 -
Cre07g0899 606 MobiDBLite consensus disorder prediction 246 260 - -
Cre07g0899 606 MobiDBLite consensus disorder prediction 347 371 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre06g1005 Cre-Chr6:3616404 Cre07g0899 Cre-Chr7:8081280 2.80E-06 dispersed
Cre07g0899 Cre-Chr7:8081280 Cre11g0613 Cre-Chr11:3248434 6.50E-36 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre07g0899 - - - 0.0