Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cre07g0899 | ATGGCCAAGAAAATGATTGCAGTGTTTTTGATGTTCATTGTGGTGTTTGCCACTGCCAATGAGGATGAGGTGACCAAATATGAGGCCAAATTTGATGCCAAATACAAGTCTTGTTATGAAACTTGCGAGAAGGAATGCCTTGAAAATGGGAATGGCCAAAGCTTCTGTGAAGTTAAATGTGATGAAGATTGTGATGAAAAAGAAACTGCTGCCGCTCCCGCATCGATCGATTTTTCGGTTAAGATGCTTTACAGGGCCTTGCAGCAATTCCTTCCAATTTCCAAATTTGTTTCCATTGTTCCAAAGAACACACAGCCATCTGACCAAACCCAGAACACCCCTCTTCTCTTCACAACCTTACTCTCTCTCAAATTCTCCAATTCCCAATTTCCTTCATCTTCCCCTTTTCCGTTTTCACCAATTCCCACCTTCCTTCTCTCTCAAAACCCACCATGGCCGATTCCCGATAACACTCAATTTCCAATTCCATTCCAACCCCCAACACACACACACACAATGTCCTCCGAAGACATCAATGGCCTCAACTCCCAGCTCGTCTTCCAAGACGAAGCCCTCCCCTTCAATTGCTCCACCACGCCGCAGCGTCGTGTCCCCGACCCAGGTCCCAAAACCCGCGAACTCTGCGGTTTCATGGACGACAAGCTCTTCCCTGGCGTGGACCGAGACCGATTCTTTTCCCACCAGGGTGAAGATTTCCGCCGCAGTGTTTTCGGTCACACCCGGAATTGGAATGGGAATGGGACTGCGAGAACTGGAAGTGGGAAAGGATCGGATGAGGATGATGATGATGACGACGATGATGAAGATGAAGTCGATGATGGTGATGATGATGTTGAGGGGCTTGTTTCTTTGGATGATGTCAATAAGTGTACTAAAACTTCTATCCCCAACGACAGCAACAATGATAGAAGCGATCAGAGTAGTGAGGGCTTGAAGAATGGGACCAACAAATTGGGAAATGGGAAGCTTAAGCACCATTCTTCTTTTGGTGGAACTCTGTTAGTCAAGGATGGTTTAGTTGGCTCTTCAGGCAACAACACAGGAGCAACTCAGAGTGAGAACCATCCGCAGGGAAGGTTGGGGAACTACCCAAATGCTGTTACAATTGCAGAACCTGAAAGTGATGCTTATTATTCCCAGTATTTGCAAAGCACTGAAGTGTCTGCTTCTGGGCAGAAGGATTTGGGTATGGAAAATGGATGTGGTTTTGGGAGAAGGGATGTGTCGTTTTCAGGAGAGCCTGGAGAGTCTCTGAGAGCAATTCTCACTGACCCTGTGACGGGCGCTCTCATGGACGATGCAATGATATTGCCGTGTGGGCATTCCTTTGGAAGCGGTGGAATCCAACATGTTCTTAGAGTAAAATCTTGTTACTCATGCTCTCAGTCAGTTTCTGAAGACTCTATTGCTCAAAACTTATCTCTTCAAGCTGCAGTCCAAGCATTCCGCCGGGAAGAAGAATTAATATTTTACCGCTCACCGAAAAGGAGAAGGGAGAGGTTTGAGCAGGACAAGGGTGGTTATGGTGATTTGACTCTCATGGATACCACAAGAGGTCGAGGTGTTCAGTTTCCTTTCGCAGTGACTGATAGGGTAATTATCAAGGGGAACAAGAGGACACCGCAACGTTTTGTGGGACGTGAGGCTGTTGTTACAACACAGTGCTTGAATGGATGGTATGTGGTGAAAACACTAGACAATGCAGAGAGTGTAAAGTTGCAGTACCGCTCGCTTGCGAAGGTTCCAAATGATGCAACATCAAAGACGATAACAAGGAAGATCACACCAAATTGGCTTTAG | 1821 | 46.46 | MAKKMIAVFLMFIVVFATANEDEVTKYEAKFDAKYKSCYETCEKECLENGNGQSFCEVKCDEDCDEKETAAAPASIDFSVKMLYRALQQFLPISKFVSIVPKNTQPSDQTQNTPLLFTTLLSLKFSNSQFPSSSPFPFSPIPTFLLSQNPPWPIPDNTQFPIPFQPPTHTHTMSSEDINGLNSQLVFQDEALPFNCSTTPQRRVPDPGPKTRELCGFMDDKLFPGVDRDRFFSHQGEDFRRSVFGHTRNWNGNGTARTGSGKGSDEDDDDDDDDEDEVDDGDDDVEGLVSLDDVNKCTKTSIPNDSNNDRSDQSSEGLKNGTNKLGNGKLKHHSSFGGTLLVKDGLVGSSGNNTGATQSENHPQGRLGNYPNAVTIAEPESDAYYSQYLQSTEVSASGQKDLGMENGCGFGRRDVSFSGEPGESLRAILTDPVTGALMDDAMILPCGHSFGSGGIQHVLRVKSCYSCSQSVSEDSIAQNLSLQAAVQAFRREEELIFYRSPKRRRERFEQDKGGYGDLTLMDTTRGRGVQFPFAVTDRVIIKGNKRTPQRFVGREAVVTTQCLNGWYVVKTLDNAESVKLQYRSLAKVPNDATSKTITRKITPNWL | 606 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 8081280 | 8089568 | - | CrPI670011_07g008990.1 | Cre07g0899 | 503480 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cre07g0899 | 606 | Gene3D | Pollen allergen ole e 6 | 32 | 76 | IPR036466 | - | |
Cre07g0899 | 606 | MobiDBLite | consensus disorder prediction | 244 | 331 | - | - | |
Cre07g0899 | 606 | ProSiteProfiles | U-box domain profile. | 424 | 496 | IPR003613 | GO:0004842(InterPro)|GO:0016567(InterPro) | |
Cre07g0899 | 606 | PANTHER | U-BOX DOMAIN-CONTAINING PROTEIN 62-RELATED | 181 | 597 | - | - | |
Cre07g0899 | 606 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 423 | 495 | IPR013083 | - | |
Cre07g0899 | 606 | MobiDBLite | consensus disorder prediction | 294 | 322 | - | - | |
Cre07g0899 | 606 | MobiDBLite | consensus disorder prediction | 265 | 288 | - | - | |
Cre07g0899 | 606 | MobiDBLite | consensus disorder prediction | 347 | 368 | - | - | |
Cre07g0899 | 606 | SUPERFAMILY | RING/U-box | 424 | 496 | - | - | |
Cre07g0899 | 606 | Pfam | Pollen allergen Ole e 6 | 38 | 69 | IPR015333 | - | |
Cre07g0899 | 606 | SUPERFAMILY | Pollen allergen ole e 6 | 32 | 69 | IPR036466 | - | |
Cre07g0899 | 606 | MobiDBLite | consensus disorder prediction | 246 | 260 | - | - | |
Cre07g0899 | 606 | MobiDBLite | consensus disorder prediction | 347 | 371 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cre06g1005 | Cre-Chr6:3616404 | Cre07g0899 | Cre-Chr7:8081280 | 2.80E-06 | dispersed | |
Cre07g0899 | Cre-Chr7:8081280 | Cre11g0613 | Cre-Chr11:3248434 | 6.50E-36 | dispersed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cre07g0899 | - | - | - | 0.0 |