Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre07g0902 ATGGAGGCTTCTTCTTCTTCAATCAAATGGAGCTCTGAAAATGAAAATGGATCTCAACCTCATGTTCTTGCTGTTGATGATAATCTTGTTGATCGTAAACTTGTTGAGAAGTTACTCAAAAACTCCTCTTGTAAAGTAACGACGGCAGAAAATGGTGTTAGTGCTTTGGAGTTCTTAGGTTTGTTGGATGAACATAATCAACACAGCAACTTAGAATGCTCCAATAGGTCAAAGGTGAACATGATCATCACAGATTATTGCATGCCAGGAATGTCTGGATATGAACTTCTCAAGAAAATCAAGAGATCTTCGATGATGAAGGAAGTTCCTGTGGTGGTTGTATCATCGGAAAACGTGCCCACTCGCATCAACAAGTGTTTGAAAGAAGGAGCAGAAATGTTCATGCTGAAACCTTTGAAACAATCTGATGTGGTGAAACTCAAGTGCCAGTTGATGAACTGA 462 39.39 MEASSSSIKWSSENENGSQPHVLAVDDNLVDRKLVEKLLKNSSCKVTTAENGVSALEFLGLLDEHNQHSNLECSNRSKVNMIITDYCMPGMSGYELLKKIKRSSMMKEVPVVVVSSENVPTRINKCLKEGAEMFMLKPLKQSDVVKLKCQLMN 153
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 8148361 8150520 + CrPI670011_07g009020.1 Cre07g0902 503483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre07g0902 153 ProSiteProfiles Response regulatory domain profile. 21 152 IPR001789 GO:0000160(InterPro)
Cre07g0902 153 SUPERFAMILY CheY-like 18 147 IPR011006 -
Cre07g0902 153 PANTHER TWO-COMPONENT RESPONSE REGULATOR 16 148 IPR045279 GO:0009736(InterPro)
Cre07g0902 153 Pfam Response regulator receiver domain 22 146 IPR001789 GO:0000160(InterPro)
Cre07g0902 153 Gene3D - 16 153 - -
Cre07g0902 153 SMART REC_2 20 148 IPR001789 GO:0000160(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre05g2664 Cre-Chr5:37620159 Cre07g0902 Cre-Chr7:8148361 2.90E-37 dispersed
Cre07g0902 Cre-Chr7:8148361 Cre10g1736 Cre-Chr10:31659739 4.20E-40 dispersed
Cre07g0902 Cre-Chr7:8148361 Cre06g2534 Cre-Chr6:32991425 2.10E-39 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
54013 PF00072 Response_reg 1.00E-21 CL0304 Cre TR
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre07g0902 K14492 - csv:101208898 248.825