Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre07g0973 ATGACGAAGTCCAAGAGTTTTATACACAACCTCATCAGACCATTCAGATTCGGTTCCTCAAGAGATAGGCAGGGCGAGGATGATTTGGAGGAGATTGCTGCTAAGGAACAGAAGGTTATTCAGTTCGAAATCTTAGTTGAAGCTACCAATAATTTCCACCAGAATAACAAGCTTGGCCAAGGCGGATTTGGTCCAGTTTTCAAGGGGAAGTTAAAGGATGGAAGAGTTATTGCAGTTAAAAAGTTGTCGCATTATTCAAAACAAGGAAGAAAGGAGTTTATGACTGAAGCTAAATTGTTGGCTCGTGTGCAGCACAGAAATGTTGTCAATCTGTTGGGATACTGTGTGCATGGTTCAGAGAAACTACTGGTTTACGAATACGTCACGAATGAGAGCCTTGACAAGCTTCTATTTAAATCCAGCAGACGAGGAGAACTTGATTGGAAGAGGAGGTATGACATAATCTTTGGCATCGCACGAGGGTTGCAATATCTTCATGTTGACTCACATAATGTCATTATCCATCGTGACATAAAGGCTAGTAACATTTTGTTGGATGATAAATGGGTCCCTAAGATTGCAGATTTTGGCATGGCTCGTCTCTTCCCTGAAGATCAAACTCATGTCAATACTCGTGTTGCTGGTACAAACGGATATATGGCTCCCGAATATGTGATGCACGGACATCTATCAGCAAAGGCAGATGTTTTTAGCTTTGGTGTTTTGGTTTTGGAACTTATAAGCGGCCAGCGAAATTCGTCATTTAGTTCATTTATGGATGCCGAGAATCTACTTGATTGGGCTTACAAGCTATACAAGAAGGGCAGGAGCTTGGAAATCATGGACCCAACATTAGCATCATCAGCTGTTCCTGACCAAGTTACAATGTGCATTCAGATAGGATTGCTCTGCACACAAGGCGATCCGCACCTACGGCCAGCCATGCCACGTGTAGTTTTAATCCTTTCGAAGAGACATGGTAATTTGGACGAACCAACAAGACCAGGAATACCTGGGTCTCGGTATAGAAGATCTCGTAGGACAAGTGCATCGTCCTCCAACGCTGGTACTTCGGGAACTTCTGGTGCATCCGACTCCTATGCTATGACGAGCAATACTACTGGAACTATAACTGCTACCGCAACGGCAACGGCAACAGCAAACGAACTTGCTTCTGGTTCTTCTCCTGTTAGTCGAGTATCTGCAACAGCAAATGAAGTTGCTTCTGGTTCTTCTTCAGTTAGTCAAGGATACGATACTCGTGGGAAACGTCCGATAGAAGGTTAG 1287 43.75 MTKSKSFIHNLIRPFRFGSSRDRQGEDDLEEIAAKEQKVIQFEILVEATNNFHQNNKLGQGGFGPVFKGKLKDGRVIAVKKLSHYSKQGRKEFMTEAKLLARVQHRNVVNLLGYCVHGSEKLLVYEYVTNESLDKLLFKSSRRGELDWKRRYDIIFGIARGLQYLHVDSHNVIIHRDIKASNILLDDKWVPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGHLSAKADVFSFGVLVLELISGQRNSSFSSFMDAENLLDWAYKLYKKGRSLEIMDPTLASSAVPDQVTMCIQIGLLCTQGDPHLRPAMPRVVLILSKRHGNLDEPTRPGIPGSRYRRSRRTSASSSNAGTSGTSGASDSYAMTSNTTGTITATATATATANELASGSSPVSRVSATANEVASGSSSVSQGYDTRGKRPIEG 428
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 11506013 11511062 + CrPI670011_07g009730.1 Cre07g0973 503554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre07g0973 428 ProSiteProfiles Protein kinase domain profile. 52 329 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cre07g0973 428 Gene3D Phosphorylase Kinase; domain 1 17 127 - -
Cre07g0973 428 Gene3D Transferase(Phosphotransferase) domain 1 128 332 - -
Cre07g0973 428 Pfam Protein tyrosine and serine/threonine kinase 53 317 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cre07g0973 428 FunFam Cysteine-rich receptor-like protein kinase 10 16 127 - -
Cre07g0973 428 SUPERFAMILY Protein kinase-like (PK-like) 38 340 IPR011009 -
Cre07g0973 428 MobiDBLite consensus disorder prediction 385 419 - -
Cre07g0973 428 MobiDBLite consensus disorder prediction 344 368 - -
Cre07g0973 428 CDD STKc_IRAK 58 324 - -
Cre07g0973 428 ProSitePatterns Serine/Threonine protein kinases active-site signature. 173 185 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cre07g0973 428 FunFam Cysteine-rich receptor-like protein kinase 10 129 334 - -
Cre07g0973 428 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 32 358 IPR052059 GO:0004674(PANTHER)|GO:0006468(PANTHER)
Cre07g0973 428 MobiDBLite consensus disorder prediction 327 368 - -
Cre07g0973 428 SMART serkin_6 52 329 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cre07g0973 428 MobiDBLite consensus disorder prediction 385 428 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre07g0973 Cre-Chr7:11506013 Cre10g0828 Cre-Chr10:8941168 1.80E-80 dispersed
Cre07g0973 Cre-Chr7:11506013 Cre04g1858 Cre-Chr4:36262618 8.30E-86 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
64260 PF00069 Pkinase 2.90E-49 CL0016 Cre PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre07g0973 - - - 0.0