Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre07g1026 TCTTTCATTTTGATTCCCACTTCTTTTCGCTTTGAAAACCATCAAGGCATCAACGCACGCCTCTGTGGACCCCTTCACAAGAATATGATTGAAAAGGAATTTTTCACTGAATATGGTGAAGCTACTCAATATGAAATTGAAGAAGTAATAGGTAGAGGGAGCTATGGAGTTGTTGCATCTGCCATAGACACTCATTCTGGTGAGAAAGTTGCCATCAAGAAGATAAATAATGTCTTCGAGCATGTTTCTGATGCCACACGGATTCTAAGAGAAGTTAAGCTCCTTAGGTTTCTTCGTCATCCTGATATTGTTGATATAAAACATATAATGCTCCCTCCATCCAGAAGGGATTTCAAAGATTTGTACATTGTTTTTGAGTTGATGGAGTGTGATCTTCATCATGTACTCAAGACTAATGATGATCTCACTCCTCAGCATCATCAGTTTTTCTTGTATCAACTTCTTAGAGCCTTGAAATATATACATTCAGCGCATGTGTTCCATAGAGATCTGAAGCCGAAGAATATACTTGCCAATGCAGACTGCAAGCTGAAGATCTGTGACTTTGGGCTTGCACGTGCATCTTTTAGTGATGCCCCATCTGCTATTTTTTGGACTGATTATGTGGCTACTCGATGGTACCGTGCTCCTGAACTCTGTGGTTCTTTTTTCTCAAAGTATACACCAGCTATTGATATTTGGAGCATAGGATGTATTTTTGCTGAAATGTTGGCAAGCAAGCCATTGTTTCCTGGGAAAAGTGTTGTCCATGAGCTGGATCTAATAACTGACTTACTTGGTACTCCTTCAGCTGAATGTATTGCTAAGATTCGTAATGAAAAGGCTAAAAGGTATTTGAGTGGCATGAGAAAAAAGAATCCAATACCTCTGTCTAGAAAGTTCCCTAATGCAGATCCACTAGCTCTTCGTTTACTTGAACGCCTGCTTGCATTTGATCCTGAGGATCGTCCTTCTGCAGAGGAGGCATTAGCTGATCCTTATTTCCATGGACTGGCAAATCTGAAGGATGAACCATCTAGGCAACCCATTTCAAAACTCGAGTTTGAGTTTGAAAGGAGAAAGTTGACCAAAGATGATGTCAGAGAGCTTATCTATAGAGAAATTTTAGAGTATCACCCTCAAATGCTACAGGAATACCTTCAAGGTTCTGGGAGTCACTTTGTGTATCCCAGTGGAATTGATCGATTCAAGCGACAATTTGATCATCTTGAGGAACGTTCTGGTAAAGGTGAGAGAGGCAGTCCAGTTCTAAGGAAGTATGCCTCCTTGCCTAGGGAACGAATTTATATGCCAATAAATGAAGATGATGACGAAAAACGTAAAACAGAACAACGAAATGCAGCTTCAGCTGAACATGTAGCACTTCAAAGCCCTCCTGGACCTGCTTATTCATTAACTGCTCGGAACGGTTCTGTTCAATGGTTGCACGGAAGGAAAGAATACAACATTGCTAGCCTTCCTCAGATTCTTAATTTGTAA 1500 40.53 SFILIPTSFRFENHQGINARLCGPLHKNMIEKEFFTEYGEATQYEIEEVIGRGSYGVVASAIDTHSGEKVAIKKINNVFEHVSDATRILREVKLLRFLRHPDIVDIKHIMLPPSRRDFKDLYIVFELMECDLHHVLKTNDDLTPQHHQFFLYQLLRALKYIHSAHVFHRDLKPKNILANADCKLKICDFGLARASFSDAPSAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLASKPLFPGKSVVHELDLITDLLGTPSAECIAKIRNEKAKRYLSGMRKKNPIPLSRKFPNADPLALRLLERLLAFDPEDRPSAEEALADPYFHGLANLKDEPSRQPISKLEFEFERRKLTKDDVRELIYREILEYHPQMLQEYLQGSGSHFVYPSGIDRFKRQFDHLEERSGKGERGSPVLRKYASLPRERIYMPINEDDDEKRKTEQRNAASAEHVALQSPPGPAYSLTARNGSVQWLHGRKEYNIASLPQILNL 499
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 13598636 13602892 - CrPI670011_07g010260.1 Cre07g1026 503607
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre07g1026 499 ProSiteProfiles Protein kinase domain profile. 44 335 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cre07g1026 499 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 41 376 IPR050117 GO:0004674(PANTHER)|GO:0004707(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0035556(PANTHER)
Cre07g1026 499 FunFam Mitogen-activated protein kinase 359 381 - -
Cre07g1026 499 Pfam Protein kinase domain 44 335 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cre07g1026 499 SMART serkin_6 44 335 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cre07g1026 499 SUPERFAMILY Protein kinase-like (PK-like) 41 340 IPR011009 -
Cre07g1026 499 Gene3D Phosphorylase Kinase; domain 1 60 381 - -
Cre07g1026 499 FunFam Mitogen-activated protein kinase 31 136 - -
Cre07g1026 499 Gene3D Transferase(Phosphotransferase) domain 1 130 358 - -
Cre07g1026 499 MobiDBLite consensus disorder prediction 437 469 - -
Cre07g1026 499 FunFam Mitogen-activated protein kinase 130 358 - -
Cre07g1026 499 ProSitePatterns MAP kinase signature. 79 182 IPR003527 GO:0004707(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cre07g1026 499 MobiDBLite consensus disorder prediction 437 454 - -
Cre07g1026 499 CDD STKc_TDY_MAPK 43 380 - -
Cre07g1026 499 ProSitePatterns Protein kinases ATP-binding region signature. 50 74 IPR017441 GO:0005524(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre03g1273 Cre-Chr3:18957520 Cre07g1026 Cre-Chr7:13598636 3.50E-255 dispersed
Cre07g1026 Cre-Chr7:13598636 Cre07g1403 Cre-Chr7:28935437 1.60E-173 dispersed
Cre07g1026 Cre-Chr7:13598636 Cre06g2306 Cre-Chr6:31024317 1.70E-207 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
64261 PF00069 Pkinase 3.20E-67 CL0016 Cre PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre07g1026 - - - 0.0