Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre07g1070 ATGGAGAAGGAAATGAAGAAGACGAGCCTGAAGATGGAGAAGGAAATGACCGAAGACGAGCCTGAAGAAACTGAAGAAGACGTGAGATGGTTGTACGAAATTCAGAGGGGGCCAGAGTCTGTGTTGCAGTTATGGGCTTGTAGCTTCCACTCTGTCAATCACTTCCCAATGGATCCCCCAACCTCCCACCGTAGTCGCAGAACCACCAACAAATCTGAGCTCTACTCCACAGTTGTCATCCATTCCAATTCTGATTCCGACTCCGACAACAATCCTGACGATCGGAATCTTCACCCTCCACGAAGGCTACCCAGCGAAGGACAAGACCTTTACGCCACAATGCTCTATAAGGACGTTGATAAGCCCCGCGGCGACGACGACGACGACGATGATTCCTCTCTCCCTCCTCTCCTCAAACGTCTTCCCAAGGATTTCGGTGGCGGAGCCCCAATTGACTACGAGGACGACCATGCTTTTGATTTCGATCACGATACTGAAGACTTCGGTACCATGATCGTCAAGACGGACAGAAATCGTCCTCGAAATCGCTCTATGTCTTCTTCAGTTTCGACGAAGCCTCGAACTTCGCCGCTGTCGTTTATGAACTTTCAGCCGGGGAGCCCCGGAAAGAGAGCTGGCAGTGAAGAAGGCGACGACAGCGAGGAAGATGATGGTGATGAGTATTCTACGTTTGTGGTGAGGTCCACGGGGAGGTCGCGGAACAGAGAATCTGTTAGTGGGACTGTTGTTCGAAGGACTGCTGGTAGTCGCAGTGGTTCCAGAGATGGAGGCGGAGGACATGAGGGGTCCACGATGGGCAGAGCGGTCGCCAGTATGCAAGGTATGGGAGAGTTAGGGTTTGGGAAGCAGAGGAAGGGGAATGGATCACCGAGGAGTGAGGAAGGCGGTGGTCGGATACGCAGTAAGGTATCCTCAAGTTCGATTCCGGAAAGCATCACCAGGGAAGATCCACATTCTAAGTATGAATTGCTCAACGAACTTGGAAAGGGGTCCTATGGGGCTGTATATAAAGCAAGAGATATTAAGACCTCTGAGCTGGTTGCTATCAAGGTCATTTCTTTATGTGAAGGGGAGGAAGGATATGAAGAAATTCGTGGTGAAATTGAGATGTTGCAGCAATGCAGTCATCCAAATGTTGTTCGCTATCTTGGGAGCTATCAAGGAGAAGAGTATCTATGGATAGTAATGGAGTACTGTGGGGGTGGCAGTGTTGCTGACTTGATGAATGTTACCGAGGAACCTCTAGAGGAATATCAGATTGCATATATCTGTAGGGAGGCATTGAAGGGCCTCACTTATCTTCATTCAATATTCAAAGTTCACAGAGATATCAAGGGTGGTAATATTTTGTTAACTGAGCAAGGAGATGTCAAGTTGGGCGATTTTGGAGTTGCAGCCCAGCTGACTAGGACCATGTCAAAGCGCAATACATTCATTGGCACTCCACATTGGATGGCTCCAGAAGTTATTCAGGAAAGTCGATACGATGGGAAGGTGGATGTGTGGGCTCTTGGTGTTTCTGCTATTGAAATGGCTGAGGGGCTTCCTCCAAGATCAGCAGTGCATCCAATGAGGGTTTTATTCATGATATCGATTGAGCCAGCTCCAATGCTTGAAGACAAAGAAAAATGGTCCTTGTTGTTCCATGATTTTGTTGCAAAGTGTCTGACAAAAGATCCCCGTTCACGTCCTGCTGCTTCTGAAATGTTGAAGGAGGATTTGTTCTTGATCTTGAATCATGTTCTTGTCTTCTTTGAAGAAATGTTAGGTTTGAGGATAAATAGGGGTAAATGCTGTATTATGGGGCTCAATTATGTTGATGAAAAACTAGAAGATGGGTAG 1863 47.56 MEKEMKKTSLKMEKEMTEDEPEETEEDVRWLYEIQRGPESVLQLWACSFHSVNHFPMDPPTSHRSRRTTNKSELYSTVVIHSNSDSDSDNNPDDRNLHPPRRLPSEGQDLYATMLYKDVDKPRGDDDDDDDSSLPPLLKRLPKDFGGGAPIDYEDDHAFDFDHDTEDFGTMIVKTDRNRPRNRSMSSSVSTKPRTSPLSFMNFQPGSPGKRAGSEEGDDSEEDDGDEYSTFVVRSTGRSRNRESVSGTVVRRTAGSRSGSRDGGGGHEGSTMGRAVASMQGMGELGFGKQRKGNGSPRSEEGGGRIRSKVSSSSIPESITREDPHSKYELLNELGKGSYGAVYKARDIKTSELVAIKVISLCEGEEGYEEIRGEIEMLQQCSHPNVVRYLGSYQGEEYLWIVMEYCGGGSVADLMNVTEEPLEEYQIAYICREALKGLTYLHSIFKVHRDIKGGNILLTEQGDVKLGDFGVAAQLTRTMSKRNTFIGTPHWMAPEVIQESRYDGKVDVWALGVSAIEMAEGLPPRSAVHPMRVLFMISIEPAPMLEDKEKWSLLFHDFVAKCLTKDPRSRPAASEMLKEDLFLILNHVLVFFEEMLGLRINRGKCCIMGLNYVDEKLEDG 620
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 15983830 15996737 - CrPI670011_07g010700.1 Cre07g1070 503651
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre07g1070 620 MobiDBLite consensus disorder prediction 232 255 - -
Cre07g1070 620 MobiDBLite consensus disorder prediction 285 324 - -
Cre07g1070 620 PANTHER SERINE/THREONINE-PROTEIN KINASE TAO 300 580 IPR050285 GO:0006468(PANTHER)|GO:0035556(PANTHER)|GO:0043408(PANTHER)
Cre07g1070 620 CDD STKc_MAP4K3_like 327 578 - -
Cre07g1070 620 FunFam serine/threonine-protein kinase dst1 isoform X1 325 596 - -
Cre07g1070 620 FunFam Aurora kinase A 320 409 - -
Cre07g1070 620 MobiDBLite consensus disorder prediction 1 26 - -
Cre07g1070 620 SUPERFAMILY Protein kinase-like (PK-like) 325 583 IPR011009 -
Cre07g1070 620 MobiDBLite consensus disorder prediction 81 151 - -
Cre07g1070 620 ProSiteProfiles Protein kinase domain profile. 328 583 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cre07g1070 620 MobiDBLite consensus disorder prediction 87 102 - -
Cre07g1070 620 MobiDBLite consensus disorder prediction 172 273 - -
Cre07g1070 620 SMART serkin_6 328 582 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cre07g1070 620 ProSitePatterns Protein kinases ATP-binding region signature. 334 357 IPR017441 GO:0005524(InterPro)
Cre07g1070 620 Pfam Protein kinase domain 328 582 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cre07g1070 620 MobiDBLite consensus disorder prediction 182 203 - -
Cre07g1070 620 Gene3D Transferase(Phosphotransferase) domain 1 324 590 - -
Cre07g1070 620 MobiDBLite consensus disorder prediction 1 17 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre07g1070 Cre-Chr7:15983830 Cre11g1591 Cre-Chr11:26097022 2.90E-273 dispersed
Cre07g1070 Cre-Chr7:15983830 Cre03g1805 Cre-Chr3:34901700 3.50E-37 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
64263 PF00069 Pkinase 1.60E-66 CL0016 Cre PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre07g1070 - - - 0.0