Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre07g1071 ATGAAGCCCGCTTCTCATAACTCTGTCTTCGTTGTGCGCCCCAGTACAGAGATCCATGGCAATGCCCCCGTTTCTTCTTCAATCTCCAATTATAACTCCTGTAATTCCTGTTCCTTTGCTTCTCCCAATCCCATTCCTCAACCAACCCACCACTTTCTGATCGATCTTCAAGCTTCAACCGGCGGAAATGGCAATGCAGGCTTCTTAATCCACGGAAGTGATGGAACGGAAGGACTTTTTGTCGATGATTGCAGTTCGGAACTCGCCAATTTCAGTAGTCGGTGTTTTCCCGAGGACGTTGCCATTGGAGAGCATCTTGTTCTTAACTCCATGTCTACAGAAGATGAGACTGTTTGCAATGCCAATCCAACCGAGCTCCAAGAGGTGTTTTCTGCGATGAACCTTATGGTTTTGAGGTATTCTCCATTTTTCTTCATTTTGTTGGTTTGTGTACTGCCTCTGGTTCGAGCTGGAGATGCAGAAGCTCTGTTAGCACTGAAAGAATCTCTTGACCCTGGGAACTCGCTACCATGGCGGGGAAGATCTGTCTGCCACTGGCAAGGGGTTAAAGAATGTGCGAATGGGCGGGTAACTAAGCTCGTTTTGGAGCATCTAAATCTCTCTGGTGTTCTTAACCACAAGATTTTGAATCGTTTAGATCAGCTTCGTGTTCTCAGTTTCAAAGGAAATTCACTTTCCGGTCAAATCCCTGACCTCTCGGGTCTCGTTAATCTCAAATCCCTCTATCTAAGTGACAACAACTTTTCCGGCGAGTTTCCGAGCTCCATCTCCGATCTCCACCGCTTGAAAGTCGTCGTTCTTTCCGGTAACCAAATATCTGGCCCCATTCCAGAGTCATTGCTCAAACTCCGGCGTCTCTATGTTCTACACTTGCAGGACAACCAACTCACCGGCTCCATTCCTCCTTTCAACCAAACCAGTCTCCGATTCTTCAATGTCTCTAACAACCACCTCTCCGGCGACATCCCAGTGACCCCCACCTTAGCCCGATTTAATGTCTCGTCATTTTCCGGCAACCTGGAACTTTGCGGAGAACAAGTTCAAAACCCTTGTGGGAATATTTCCATTGCGCCATCATTAAGTCCCTCTTATCCACAATTCCCGAACTCAAGCTCGTCTTCAAGACGCAACAAATTGGTCAAGATAATAGCAGGAAGCGTTGGTGGGTTTGTCGGGCTGCTATTAATCATTCTTTTACTGTGTATGATTTGCAAATGTAGGGAAAGAAAGAGCCTAGCGGAGGTTAGAAACAAAGGAATTGGGGACGAGGGGATGGGGATGGGAATGGAGGAAACATCTGGAACTCCGGGCGGTGGTAGAGGAGGTAATAACGGTGTAAAACAAGGGGGGTTTTCATGGGAAAGTGAAGGACTAGGGAGTCTAGTGTTCTGCGGAGCAGGGGATCAGAAAATGACTTATAGCTTGGAAGATCTGTTGAAAGCTTCGGCTGAGACTTTGGGCAGAGGGACCATCGGAAGCACATACAAGGCAGTGATGGAATCTGGGTATATTGTGACAGTGAAGCGGCTGAAGGATTCAAGGTACCCACGAGCAGAGGAATTCGGACGGCAAATGGAGGTTCTTGGGCGGCTCAGACACCCCAACTTGGTTCCTCTTAGGGCATATTTCCAGGCTAAGGAGGAACGCTTGCTCGTATACGATTACTTCCCCAATGGTAGTCTCTTCTCTCTCATCCACGGATCGAGAACTTCAGGCGGAGGAAAGCCTCTTCATTGGACATCCTGCCTAAAAATAGCTGAAGACTTGGCCAATGGTCTGCTCTACATCCACCAGAACCCAGGCTCCACACATGGAAACCTCAAATCCTCAAACGTACTATTAGGATCCGACTTCGAGTCTTGTCTTACTGATTACGGTCTTAACTTATTCCGAGACCCCGACTCGCTCGAAGAACCTAGTGCAACCTCACTCTTTTACCGAGCTCCTGAATGCCGCGACATCCGTAAGCCAACCACTCAACAAGCTGATGTTTATAGTTTTGGTGTTCTTCTGTTGGAGCTTCTTACTGGGAAAACACCATTCCAGGATCTTGTTCAAGAACATGGTTCTGACATTCCCAAGTGGGTTAGTTCAGTTAGAGAAGAGGAGACGGAGTCCGGGGACGATCCTGCGTCTGGGAACGAGGCATCCGAAGAGAAACTTCAAGCTCTTTTGAACATAGCAATGGCTTGTGTTTCGCTTATGCCGCAAAACCGACCTACAATGAGGGAAGTTCTAAAGATGATAAGAGATACAAGAGCAGAGGCTCAAATCTCATCCAACAGTAGTGACCATTCACCAGGGAGATGGTCTGATATTGTGCAGAGTTTGCCCAGGGAAGAACATTTAAGCATTTGA 2379 47.54 MKPASHNSVFVVRPSTEIHGNAPVSSSISNYNSCNSCSFASPNPIPQPTHHFLIDLQASTGGNGNAGFLIHGSDGTEGLFVDDCSSELANFSSRCFPEDVAIGEHLVLNSMSTEDETVCNANPTELQEVFSAMNLMVLRYSPFFFILLVCVLPLVRAGDAEALLALKESLDPGNSLPWRGRSVCHWQGVKECANGRVTKLVLEHLNLSGVLNHKILNRLDQLRVLSFKGNSLSGQIPDLSGLVNLKSLYLSDNNFSGEFPSSISDLHRLKVVVLSGNQISGPIPESLLKLRRLYVLHLQDNQLTGSIPPFNQTSLRFFNVSNNHLSGDIPVTPTLARFNVSSFSGNLELCGEQVQNPCGNISIAPSLSPSYPQFPNSSSSSRRNKLVKIIAGSVGGFVGLLLIILLLCMICKCRERKSLAEVRNKGIGDEGMGMGMEETSGTPGGGRGGNNGVKQGGFSWESEGLGSLVFCGAGDQKMTYSLEDLLKASAETLGRGTIGSTYKAVMESGYIVTVKRLKDSRYPRAEEFGRQMEVLGRLRHPNLVPLRAYFQAKEERLLVYDYFPNGSLFSLIHGSRTSGGGKPLHWTSCLKIAEDLANGLLYIHQNPGSTHGNLKSSNVLLGSDFESCLTDYGLNLFRDPDSLEEPSATSLFYRAPECRDIRKPTTQQADVYSFGVLLLELLTGKTPFQDLVQEHGSDIPKWVSSVREEETESGDDPASGNEASEEKLQALLNIAMACVSLMPQNRPTMREVLKMIRDTRAEAQISSNSSDHSPGRWSDIVQSLPREEHLSI 792
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 16049468 16055525 + CrPI670011_07g010710.1 Cre07g1071 503652
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre07g1071 792 Gene3D Phosphorylase Kinase; domain 1 470 562 - -
Cre07g1071 792 ProSiteProfiles Protein kinase domain profile. 487 765 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cre07g1071 792 MobiDBLite consensus disorder prediction 702 723 - -
Cre07g1071 792 SUPERFAMILY Protein kinase-like (PK-like) 491 765 IPR011009 -
Cre07g1071 792 SUPERFAMILY L domain-like 158 350 - -
Cre07g1071 792 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 154 764 IPR046959 -
Cre07g1071 792 FunFam Nuclear pore complex protein NUP107 156 309 - -
Cre07g1071 792 MobiDBLite consensus disorder prediction 763 777 - -
Cre07g1071 792 Pfam Protein kinase domain 490 754 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cre07g1071 792 MobiDBLite consensus disorder prediction 763 792 - -
Cre07g1071 792 Gene3D Ribonuclease Inhibitor 157 311 IPR032675 -
Cre07g1071 792 Gene3D Ribonuclease Inhibitor 312 360 IPR032675 -
Cre07g1071 792 Pfam Leucine rich repeat N-terminal domain 158 189 IPR013210 -
Cre07g1071 792 Pfam Leucine rich repeat 244 303 IPR001611 GO:0005515(InterPro)
Cre07g1071 792 Gene3D Transferase(Phosphotransferase) domain 1 563 778 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre07g1071 Cre-Chr7:16049468 Cre11g0754 Cre-Chr11:4739809 4.00E-78 dispersed
Cre07g1071 Cre-Chr7:16049468 Cre04g1323 Cre-Chr4:32050929 2.70E-106 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
64264 PF00069 Pkinase 8.00E-36 CL0016 Cre PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre07g1071 - - - 0.0