Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre07g1116 ATGTTTTTCCATTTTTGTCTTTCAAAATTTTCTTTTGGAGATACAAAATATATTGATATCTCATTTTCCAATCAAGAACTTCTGTCCACCAAAATTCAGTTTTTTTGCTGGTCAGAAATGGCAGTGAATGAGACCGGAACGGGTAGCTGTCCGGCGGCGATGAAAGCGACATCGAACGGCGTGTTTCAAGGCGACAACCCGCTTGATTTCGCTCTCCCTTTAGCCATTCTTCAAATATGTTTAGTGGTTGTTCTTACTCGTCTTCTTGGTTTCCTTCTCCGACCACTCAGACAACCTCGAGTCATCGCTGAGATTGTCGGAGGAATATTGTTGGGACCGTCGGCAGTGGGGCGGAGCCAAGAATTTCTTCACAGAGTCTTTCCGGCAAGAAGCCTACCGGTGTTGGACACATTGGCAAATCTGGGTCTTCTGTTCTTCCTATTTTTGGTGGGGTTGGAGTTAGATCTCAAATCCCTCCGTCGTACCGGAAAGGGTGCAATGGCCATAGCCATTGCCGGAATCACCCTCCCTTTCATCCTCGGCATTGGAACCTCCTATGTCCTCCGTTCCACCATCTCCAAAGGCGTCCATGGCCCTCCTTTTCTCGTCTTCATGGGCGTAGCTCTCTCCATTACCGCTTTCCCCGTCCTTGCCCGCATTCTCGCCGAACTCAAGCTCTTAACCACCAACGTCGGTCGCATGGCCATGTCTGCCGCCGCCGTCAATGACATCGCCGCTTGGATTCTCCTGGCCCTCGCCGTCGCCCTCTCCGGCACCGGCCGCTCCCCTCTCGTCTCCCTCTGGGTCTTCCTGTGCGGCTTTGCTTTTGTCCTGTTTTGCTTCTTCACTCTCCCGCCCATCTTCGGTTGGATTTCCCGCCACTGCTCCAATGGCGAGCCAGTAAGCGAACTCTACATTTGCGCCATTTTATCCAGCGTCTTGGCAGCTGGATTCATCACCGACTTAATTGGAATCCACGCCCTGTTTGGCGCTTTCGTCGTCGGTGTCTTCGTCCCAAAAGACGGCCCACTCGCTGGAGCCCTGGTGGAGAAAGTCGAAGATCTTGTATCGGGTCTATTCCTCCCTCTCTATTTCGTATCAAGCGGATTAAAAACCAACATTGCCACAATCAAAGGAGCCCAATCATGGGGTCTCCTCGTCCTGGTGGTATTCACCTCTTGTTTTGGGAAAATCATCGGCACAATCTCTGTAGCACTCTTTTGCAAGATGCCACTCCAAGAATCAATCGCTTTAGGATTCTTAATGAACACCAAAGGGCTAGTGGAATTAATCGTCCTAAACATAGGGAAAGACAGAAAAGTTTTAAATGACCAAACCTTTGCCATTTTAGTTCTAATGGCTATAATCACGACGTTCATCACAACCCCAGTCGTAATGGCGGTTTACAAGCCAGCAAAAAGAAAGAGCAAATCAGAATACACATGCAGAACAATCGAGCGAGAGGAGGGCAATTCAGAGCTGCGGATTTTGGCTTGCTTTCACTCTGTTAATAACATTCCTTCGATATTGAATCTGATAGAGGTTTCTCGTGGGAGGGAGGGTCGTGGTCGGCGGTTATGTGTTTATGCGATGCATTTGATGGAGCTGACGGAGAGGTCGTCGGCAATTGTAATGGTTCATAGAGCTCGAAAGAATGGATTGCCGTTTTGGAATAAAAGAGGAGGGCAGTCAGATTCGGATCAAATAGTGGTGGCTTTTGAGGCTTTTGAGCAGCTTAGTCGAGTGTCAATACGTCCAATGACGGCCATATCTGCGTTCTCAGATATGCATGAAGATATTTGTAACAGTGCCGACAGAAAACGTGCCGCCATTATCATCCTCCCATTCCACAAACACCAAAGGTTTGATGGATCTTTGGAGACAACACGGACTGATTTTCGATGGGTGAATCAAAAAGTTCTAGAACAACCACCATGCTCGGTTGGGATCTTAGTCGACCGAGGTTTCGGAGGTGGTTCACACATATGTGCTAGTAATGTTTCTTCCATCATAACTGTCTTCTTCTTTGGCGGTCGTGACGATCGCGAAGCTTTAGCCTATGGTCGAAGAATGGCTGAACATCCAGGAATAACCCTAAATGTCGTTCGTTTTCTTCCAAGCTCTGACATGGCTACAGAATCAACTATAGTTGACATGAATAAAGACGATAGCAATATTTCGGCACTCATGGATCAGAAAGTATTGATGGAGTTGAATGTGAAAAAAACAGAGGACGAATCAATTAGATATGAAGAGAGAACAGTGAGCAAATGCAATGAGACCATTGAAATAATAAGAGAATTTAGTAGATGCAATTTGATATTGGTGGGTCAATCCCCTGAAGGCCAAGTAGTGGAAAGTCTTCATTTCAAAGGTGTTGAATGCTCGGAGTTGGGTCCCATTGGCAACTTGTTGATATCATCTGATCTCCCAATGTCAGCTTCAGTGTTGGTGGTGCAACAATTTCGTGGTCCATTATTGTCTTCTTCATCCACGTCTACAGCCATGGTATTGCCCGAAGAAGTTACTGAGTAA 2535 46.94 MFFHFCLSKFSFGDTKYIDISFSNQELLSTKIQFFCWSEMAVNETGTGSCPAAMKATSNGVFQGDNPLDFALPLAILQICLVVVLTRLLGFLLRPLRQPRVIAEIVGGILLGPSAVGRSQEFLHRVFPARSLPVLDTLANLGLLFFLFLVGLELDLKSLRRTGKGAMAIAIAGITLPFILGIGTSYVLRSTISKGVHGPPFLVFMGVALSITAFPVLARILAELKLLTTNVGRMAMSAAAVNDIAAWILLALAVALSGTGRSPLVSLWVFLCGFAFVLFCFFTLPPIFGWISRHCSNGEPVSELYICAILSSVLAAGFITDLIGIHALFGAFVVGVFVPKDGPLAGALVEKVEDLVSGLFLPLYFVSSGLKTNIATIKGAQSWGLLVLVVFTSCFGKIIGTISVALFCKMPLQESIALGFLMNTKGLVELIVLNIGKDRKVLNDQTFAILVLMAIITTFITTPVVMAVYKPAKRKSKSEYTCRTIEREEGNSELRILACFHSVNNIPSILNLIEVSRGREGRGRRLCVYAMHLMELTERSSAIVMVHRARKNGLPFWNKRGGQSDSDQIVVAFEAFEQLSRVSIRPMTAISAFSDMHEDICNSADRKRAAIIILPFHKHQRFDGSLETTRTDFRWVNQKVLEQPPCSVGILVDRGFGGGSHICASNVSSIITVFFFGGRDDREALAYGRRMAEHPGITLNVVRFLPSSDMATESTIVDMNKDDSNISALMDQKVLMELNVKKTEDESIRYEERTVSKCNETIEIIREFSRCNLILVGQSPEGQVVESLHFKGVECSELGPIGNLLISSDLPMSASVLVVQQFRGPLLSSSSTSTAMVLPEEVTE 844
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 22196290 22202001 + CrPI670011_07g011160.1 Cre07g1116 503697
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre07g1116 844 Gene3D - 74 479 IPR038770 -
Cre07g1116 844 Pfam Sodium/hydrogen exchanger family 85 464 IPR006153 GO:0006812(InterPro)|GO:0015297(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)|GO:1902600(InterPro)
Cre07g1116 844 Coils Coil 726 746 - -
Cre07g1116 844 PANTHER CATION/H + ANTIPORTER 50 823 IPR050794 GO:0006885(PANTHER)|GO:0012505(PANTHER)|GO:0015672(PANTHER)
Cre07g1116 844 FunFam Cation/H(+) antiporter 15 74 476 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre07g1116 Cre-Chr7:22196290 Cre07g1119 Cre-Chr7:22249678 0.00E+00 dispersed
Cre07g1114 Cre-Chr7:21843139 Cre07g1116 Cre-Chr7:22196290 0.00E+00 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre07g1116 K26731 - csv:101203169 1353.58