Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre07g1119 ATGGCGACGATGATCAATGCGACGGCGATGGGTGGTGCATGTCCGGCGGCGATGAAAGCCACTTCAGACGGTATTTTCCAAGGCGATAATCCTCTGGATTATGCCCTCCCTCTTGCAATTCTTCAGATTTGTCTCGTCGTCCTTCTCACTCGCCTTCTTTCTTTCCTTCTTCGTCCTGTCCGACAACCTCGTGTTATTGCTGAGATCGTCGGCGGAATCTTGCTGGGTCCATCGGCACTTGGGCGGAACTTGAATTACTTACACACAATCTTCCCGGCGAGGAGTCTCACCGTATTGGACACATTGGCCAATTTGGGTCTTCTCTTCTTCCTTTTTCTCGTCGGCTTGGAGTTGGACCTTAAATCCCTCCGCCGCACCGGAAAACGAGCCATGTGCATTGCCTTTGCTGGGATCACCTTCCCCTTCGTCCTCGGAATCGGCACTTCTTACATCCTTCGATCAACCATCTCCAAAGGCGTCAATGAAGCTGCATTGCTCGTCTTTATGGGTGTCGCTCTTTCCATCACTGCCTTTCCTGTTCTTGCTCGTATTTTGGCGGAGCTCAAGCTTTTGACCACGGACGTCGGACGGATGGCTATGTCCGCCGCTGCCGTTAACGACATTGCAGCTTGGATCCTTCTGGCATTGGCAATTGCACTCTCTGGCACCGGCCACTCCCCTCTGGTTTCCCTCTGGGTTTTCCTATCTGGCGCTACTTTTATCCTGTTTTGTACCTTCACTATTCCGCCGGTGTTTCGGTGGATGTCGCAACGGTGCTCTGAGGGAGAGCCGGTGAAGGAATTGTACATTTGTGCCACTCTTTCCATCGTTTTGGCTGCTGGGTTCATGACTGATTTGATCGGAATCCATGCTCTGTTTGGAGCTTTCGTAGTCGGAGTTTTGATTCCGAAAGAAGGCCCATTCGCCGGAGTTCTGGTGGAGAAAGTTGAAGATCTCGTGTCCAGTCTTTTCCTTCCCTTATACTTCGTTTCCAGCGGATTGAAAACAAACGTTGCAACAATTAAAGGAGGTAAATCATGGGGTCTTCTCGTTTTAGTCATTTTCAATGCTTGTTTCGGTAAAATCGTCGGAACTGTCTCTGTTTCCCTAATGTGCAAAATGCCACTTCAAGAATCAGTTGCTTTGGGGTTCTTAATGAACACGAAAGGCTTGGTGGAATTAATCGTTCTGAATATCGGCAAAGACAGGAAGGTTTTGAATGATCAAACATTTGCAATTATGGTTCTAATGGCAATCTTCACAACTTTCATCACAACCCCAATTGTTATGGCTGTTTACAAGCCGGCGAAAAGACACAGCAAATCTAACTACCACCATAGAAAACTGGAGAGGGAAAATCCCAATTCCGAGCTCCGCATTCTGGCCTGTTTCCACTCCTTCGGAAACATTCCGGCGACGATTAACCTTATTGAGGCTTCTCGAGGGATTGAAAAGAAAGAAGGGCTCTGTGTTTATGCTCTGCATTTAACGGAGCTAACAGAGAGATCCTCTGCCATTCTTATGGTTCACAAAGCAAGGAAAAACGGCGTTCCCTTTTGGAACAAAGGCCGTGTCGATTCGAACCAGATCGTCGTTGCCTTCGAGGCATTCCGACAACTCAGCCGGGTTTCCATCCGGCCGATGACTGCCATTTCTGCTCTGTCCAACATGCACGAAGATATCTGTAGCAGTGCTGAAGCGAAAAGGGCCGCCATAATAATTCTCCCCTTTCACAAACACCAAAGATTGGATGGATCTCTTGAAACGACGAGGACTGATTACCGGTCTGTCAATCGGAAAGTTCTGGAACAAGCCCCCTGCTCCGTCGCAATTTTGATCGACAGAGGACTCGGCGGTGGGTCTCACGTCAACGCAAGTAACGTCTCCTCCACAATCACCGTCTTCTTCTTCGGCGGACGTGACGACCGTGAAGCTCTGGCGTTCGGGAAAAGAATGGCGGAACATCCCGGAATCAGCCTGCACGTCGTCCGATTCACACCCAGCGCTGATTTCGCGGTGGAATCCGTCACCGTGGACATAAACAAGAACAATTCGATGGATTCCGACGGTGACGAAAAAGCGCTAGCGTCGATTGCATACGAAGAGAGGAACGTGAGCAAAGGGAGCCACGCGGTTGAAGCGATGAAGGAATTCAATAAATCCAATTTGATTTTGGTCGGACGAATGCCGGAGGGGGAAGTGGTGAGGAGTTTGAATGTGAACGGTGGGGAAGCTTCGGAGCTTGGGCCCGTCGGTGGGGTGTTGGCATTGGCGGAGTTTTCGACGACGGCGTCGGTGCTGGTGGTGCAGCAATTTCGTGGTGAACAGTCACAGTCGCCGGTGGATTCGACTCGAGAGGAATCGACTGAAGACGATCGTTAA 2382 50.04 MATMINATAMGGACPAAMKATSDGIFQGDNPLDYALPLAILQICLVVLLTRLLSFLLRPVRQPRVIAEIVGGILLGPSALGRNLNYLHTIFPARSLTVLDTLANLGLLFFLFLVGLELDLKSLRRTGKRAMCIAFAGITFPFVLGIGTSYILRSTISKGVNEAALLVFMGVALSITAFPVLARILAELKLLTTDVGRMAMSAAAVNDIAAWILLALAIALSGTGHSPLVSLWVFLSGATFILFCTFTIPPVFRWMSQRCSEGEPVKELYICATLSIVLAAGFMTDLIGIHALFGAFVVGVLIPKEGPFAGVLVEKVEDLVSSLFLPLYFVSSGLKTNVATIKGGKSWGLLVLVIFNACFGKIVGTVSVSLMCKMPLQESVALGFLMNTKGLVELIVLNIGKDRKVLNDQTFAIMVLMAIFTTFITTPIVMAVYKPAKRHSKSNYHHRKLERENPNSELRILACFHSFGNIPATINLIEASRGIEKKEGLCVYALHLTELTERSSAILMVHKARKNGVPFWNKGRVDSNQIVVAFEAFRQLSRVSIRPMTAISALSNMHEDICSSAEAKRAAIIILPFHKHQRLDGSLETTRTDYRSVNRKVLEQAPCSVAILIDRGLGGGSHVNASNVSSTITVFFFGGRDDREALAFGKRMAEHPGISLHVVRFTPSADFAVESVTVDINKNNSMDSDGDEKALASIAYEERNVSKGSHAVEAMKEFNKSNLILVGRMPEGEVVRSLNVNGGEASELGPVGGVLALAEFSTTASVLVVQQFRGEQSQSPVDSTREESTEDDR 793
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 22249678 22252681 + CrPI670011_07g011190.1 Cre07g1119 503700
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre07g1119 793 FunFam Cation/H(+) antiporter 15 38 440 - -
Cre07g1119 793 Pfam Sodium/hydrogen exchanger family 47 429 IPR006153 GO:0006812(InterPro)|GO:0015297(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)|GO:1902600(InterPro)
Cre07g1119 793 PANTHER CATION/H + ANTIPORTER 14 778 IPR050794 GO:0006885(PANTHER)|GO:0012505(PANTHER)|GO:0015672(PANTHER)
Cre07g1119 793 Gene3D - 38 443 IPR038770 -
Cre07g1119 793 Gene3D - 489 741 - -
Cre07g1119 793 MobiDBLite consensus disorder prediction 773 793 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre04g0930 Cre-Chr4:27977533 Cre07g1119 Cre-Chr7:22249678 5.60E-211 dispersed
Cre07g1114 Cre-Chr7:21843139 Cre07g1119 Cre-Chr7:22249678 0.00E+00 dispersed
Cre07g1116 Cre-Chr7:22196290 Cre07g1119 Cre-Chr7:22249678 0.00E+00 dispersed
Cre07g1119 Cre-Chr7:22249678 Cre10g1664 Cre-Chr10:30900053 2.10E-103 dispersed
Cre07g1119 Cre-Chr7:22249678 Cre07g1122 Cre-Chr7:22410072 1.40E-293 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre07g1119 K26731 - csv:101202937 1368.99