Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre07g1122 ATGGCTTCGAATGCTACGGCAGTGACCACATGTCCAACTCCAATGAAAGCAACATCAAACGGGATTTTCCAAGGCGATAATCCTCTTGATTTTGCTCTCCCTCTTGTCATTTTGCAGATATGTTTGGTAGTCGCACTTACTCGTGGTCTTGCTTTTCTTCTCAGGCCGTTAAAACAGCCACGAGTGATTGGAGAAATTATTGGAGGAATACTTCTAGGACCATCAGCTCTTGGACGTAACAAGAAATTTCTTCATACGATATTTCCATCCAATAGTATGACATTGTTAGATACCATAGCAAACATTGGGTTGTTATTCTTTCTCTTTCTTGTGGGTCTTGAGTTAGATCTAAAGTCAATACGTCGTACTGGAAAGAAGGCCCTTGGCATTGCCATTACTGGAATTTGCGTTCCCTTTGCATTAGGAATTGGAACATCATTTGTCCTCCGAGGAACCATATCCAAAGGTGTAGATGCTTCTGCATTTCTCATATTCATGGGTGTTGCACTTTCGATAACAGCCTTTCCCGTCTTAGCTCGCATTCTTGCTGAGCTTAAACTACTGACGACTGATGTTGGCAGGATGGCTATGTCTGCTGCAGCAGTAAATGATGTAGCTGCCTGGATTCTCCTTGCTCTTGCCATTGCATTATCAGGTTCTGATAAATCTCCCCTAACTGCGGTTTGGGTCCTTTTATCTGGCTGCGGCTTTGTTGTGGCCGCTGTCGTCATTTTATCCCCAGTTTTCAAATGGATGACCAAGCAATGTTTTCAAGGGGAGCCTGTACGGGAAATCTACATATGTGCCACATTAGCTATTGTCCTAGCTGCTGGATTTGCCACGGATTTTATTGGGATACATGCTATGTTTGGAGCTTTTGTTGTTGGAGTATTAGTTCCAAAGGATGGACCATTAGTGGGTGCTTTGGTAGAGAAAATAGAGGATCTTGTTTCTGGTCTATTCCTGCCTCTGTACTTTGTCTCAAGTGGATTGAAGACTAATGTAGCCACAATTCAAGGAGCACAGTCCTGGGGTCTTCTAGTTTTAGTTATCGTCACCGCCTGTTCTGGAAAAATCCTTGGCACTTTTCTAGTGTCCCTTCTTTGTAAAGTACCTGTTCATGAGGCTCTCGCGTTAGGATTTCTAATGAACACAAAAGGTTTGGTGGAGCTTATTGTTCTCAATATTGGAAAAGATAGAAAGGTTTTGAATGATCAGACCTTTGCAATAATGATTCTAATGGCTCTTTTTACTACTTTCATTACCACCCCCCTTGTCATTGCTGTATACAAGCCAGCAAGGAGTGCCAAATTACCCGATTATAAACATAGGAAAATCGAACGGAAAAACAAGAATACGCAGCTTCGGATGTTGACCTGTTTCCATAGTGCAGGAAACATTCCATCAATTATAAATCTGCTTGAGGCCTCGAGAGGAATTCAGAAGGGAGAAGAACTTTGTGTATATGCAATGCATCTCATGGAGCTGTCCGAGCGGTCCTCAGCCATTTTAATGGTACATAAGGCCAGGAAAAATGGGTTGCCTTTCTGGAATAAGGGCCAGAGGTCAGATTCCAACCATGTTATCGTTGCGTTTGAAGCTTATCAACAACTGAGCAGAGTATTCATCCGAGCGATGACGGCCATTTCCTCCATGTCTGACATACATGAAGATATCTGTGCTACTGCCGAGAGGAAAAGAACTGCAATCATAATTCTTCCATTCCACAAGCACCAGAGGGTGGATGGTTCCCTGGAGACTACTCAAAGCAGCATCCGTGTTGTTAATCAGAATGTCCTCGAGCATGCTCAATGTTCAGTTGGAATTTTCGTTGATCGGGGGTTGGGTGGAACAACCCATGTTTCTTCGAGCAATGTTTCACTTTTCATCGCTGTTCTATTCTTTGGTGGTGGAGATGATCGCGAAGCACTTTCTTATGGAGTTCGTATGGCCGAGCACCCTGGCATTAGGTTGATGGTTATTCGATTCTTTGTTGAACCCGAGCCTGTTGGGGAGATAGTCAGTGCTGATACTGTTGGGAATTCTTCTGCGAAGATGGTTTCTCAGGATGATGAATTTCTTTCTGAGTTCAGGAACAATGTGAGCAATAACGATTCCATCATATATGTAGAGAAAACCATAAAAAGTGCTGCAGAAGCAATGGATACAGTACAGGAGCTGAAAAACTGCAATCTGTATCTTGTTGGTCGAACACCGGATGTCAATTCAACCTTTGCCTTAAACAGAAGTGACTGTCCGGAGCTTGGTCCAGTTGGGAACCTGTTGACTTCACCGAACTTCACGATTTCAGCGTCGGTTTTGGTGGTGCAGCAATATCGTTCTCAGTTACTGGTGAATTCGGCTTCAGATTCTGCTGATGGAGAATCAGAATCATCATAA 2400 43.38 MASNATAVTTCPTPMKATSNGIFQGDNPLDFALPLVILQICLVVALTRGLAFLLRPLKQPRVIGEIIGGILLGPSALGRNKKFLHTIFPSNSMTLLDTIANIGLLFFLFLVGLELDLKSIRRTGKKALGIAITGICVPFALGIGTSFVLRGTISKGVDASAFLIFMGVALSITAFPVLARILAELKLLTTDVGRMAMSAAAVNDVAAWILLALAIALSGSDKSPLTAVWVLLSGCGFVVAAVVILSPVFKWMTKQCFQGEPVREIYICATLAIVLAAGFATDFIGIHAMFGAFVVGVLVPKDGPLVGALVEKIEDLVSGLFLPLYFVSSGLKTNVATIQGAQSWGLLVLVIVTACSGKILGTFLVSLLCKVPVHEALALGFLMNTKGLVELIVLNIGKDRKVLNDQTFAIMILMALFTTFITTPLVIAVYKPARSAKLPDYKHRKIERKNKNTQLRMLTCFHSAGNIPSIINLLEASRGIQKGEELCVYAMHLMELSERSSAILMVHKARKNGLPFWNKGQRSDSNHVIVAFEAYQQLSRVFIRAMTAISSMSDIHEDICATAERKRTAIIILPFHKHQRVDGSLETTQSSIRVVNQNVLEHAQCSVGIFVDRGLGGTTHVSSSNVSLFIAVLFFGGGDDREALSYGVRMAEHPGIRLMVIRFFVEPEPVGEIVSADTVGNSSAKMVSQDDEFLSEFRNNVSNNDSIIYVEKTIKSAAEAMDTVQELKNCNLYLVGRTPDVNSTFALNRSDCPELGPVGNLLTSPNFTISASVLVVQQYRSQLLVNSASDSADGESESS 799
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 22410072 22412848 + CrPI670011_07g011220.1 Cre07g1122 503703
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre07g1122 799 Gene3D - 35 437 IPR038770 -
Cre07g1122 799 Pfam Sodium/hydrogen exchanger family 44 425 IPR006153 GO:0006812(InterPro)|GO:0015297(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)|GO:1902600(InterPro)
Cre07g1122 799 FunFam Cation/H(+) antiporter 15 35 437 - -
Cre07g1122 799 PANTHER CATION/H + ANTIPORTER 11 787 IPR050794 GO:0006885(PANTHER)|GO:0012505(PANTHER)|GO:0015672(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre02g0393 Cre-Chr2:1105028 Cre07g1122 Cre-Chr7:22410072 2.80E-207 dispersed
Cre04g0362 Cre-Chr4:10925455 Cre07g1122 Cre-Chr7:22410072 8.60E-138 dispersed
Cre07g1122 Cre-Chr7:22410072 Cre10g1664 Cre-Chr10:30900053 2.50E-104 dispersed
Cre07g1119 Cre-Chr7:22249678 Cre07g1122 Cre-Chr7:22410072 1.40E-293 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre07g1122 K26731 - csv:101223205 1403.65