Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre07g1161 ATGAGGATCCCATCATTCACATTCCTGCACTTTAATCTCCGACGAACAGATAGGCCGTACGCATACCACCCCACAGCGCTTACTTGCCAGAGGAATCGAAAAATGGCGCTTAAAGTCTATGCAGATCGAATGTCACAGCCATCTCGCGCCGTCCTGATCTTCTGCAAGGTTAACGGGATTGCTTTTGAGGAGGTGGGGGTAGCCTTGTCCAAACTCCAACAGCTGACTCCCCAATTCAAAGAGGTCAACCCAATGGCAAAGGTTCCCGTCATTGTTGATGGAAGATTTAAGTTGTTCGAGAGTCATGCTATTCTTATCTACCTTTCTTGTGCATTTCCTGGTGTGGCAGATCACTGGTATCCAGCCGATCTTTTCAGGAGGGCTAAAATAAATTCCGTACTGGATTGGCATCATTCAAATTTACGTAGTGGTGCAGCTCCTTTTATATTCAATACTGTTCTAGCACCTCTGTTTGGCCGTACTCCAAACCTTCAAGCAGCTGCTGAAGCTGAGAAGCTTTTATCCAATTCACTTTCAAAAATAGAGTCGTTTTGGCTGAAGGGGAATGGGAAGTTTTTGTTAGGTGGCTTTAAACCATCCATAGCTGATCTTAGCCTGGTTTGTGAAATTATGCAACTAGAGCTTTTGGATGAGGAGGATCGCAATCGTATTCTGGGTCCGCACCAGAAAGTGAGGGAGTGGGTTGAGAATACAAGAAATGCTACAAACCCGCATTTTGACGAGGTTCATAAGCTTCTCTTCAAGCTCAAGGAAACCCTTCAGAAGCGGCGCTCAGAGAAATTGACTTCAAAGATGTGA 819 45.3 MRIPSFTFLHFNLRRTDRPYAYHPTALTCQRNRKMALKVYADRMSQPSRAVLIFCKVNGIAFEEVGVALSKLQQLTPQFKEVNPMAKVPVIVDGRFKLFESHAILIYLSCAFPGVADHWYPADLFRRAKINSVLDWHHSNLRSGAAPFIFNTVLAPLFGRTPNLQAAAEAEKLLSNSLSKIESFWLKGNGKFLLGGFKPSIADLSLVCEIMQLELLDEEDRNRILGPHQKVREWVENTRNATNPHFDEVHKLLFKLKETLQKRRSEKLTSKM 272
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 23884971 23888470 - CrPI670011_07g011610.1 Cre07g1161 503742

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cre07g1161 272 Gene3D - 117 272 - -
Cre07g1161 272 CDD GST_N_Theta 37 112 IPR040075 -
Cre07g1161 272 Gene3D Glutaredoxin 35 116 - -
Cre07g1161 272 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 123 259 IPR010987 -
Cre07g1161 272 CDD GST_C_Theta 126 256 IPR040077 -
Cre07g1161 272 Pfam Glutathione S-transferase, N-terminal domain 35 108 IPR004045 -
Cre07g1161 272 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 35 116 IPR004045 -
Cre07g1161 272 SUPERFAMILY GST C-terminal domain-like 117 251 IPR036282 -
Cre07g1161 272 SFLD Glutathione Transferase (cytosolic) 35 264 IPR040079 -
Cre07g1161 272 PANTHER GLUTATHIONE S-TRANSFERASE T1-RELATED 35 268 IPR043377 -
Cre07g1161 272 FunFam Glutathione S-transferase theta-1 117 265 - -
Cre07g1161 272 SUPERFAMILY Thioredoxin-like 27 121 IPR036249 -
Cre07g1161 272 SFLD Main.4: Theta-like 35 264 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre07g1161 K00799 - - csv:101211608 413.69
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi2g333 Blo02g01106 . . Bda08g00522 Bpe05g00640 . . . . Cmo16g00640 . . . . . Cpe14g00502 . . . . . . . . Cla07g00766 Cam07g0822 Cec07g0880 Cco07g0857 Clacu07g0801 Cmu07g0806 Cre07g1161 . . . Cone9ag0776 . . . Cme07g01625 . . . . . . Bma05g00815 . . . . . Cma16g00590 . . . . . . . . . . . . . . . . . . . Csa04g00600 Chy07g01212 .
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Cre09g0573 . 1 210 Glutathione S-transferase Gene Family AT4G02520 60.1 5.2e-65 244.6
Cre09g0575 . 1 209 Glutathione S-transferase Gene Family AT4G02520 58.0 6.8e-65 244.2
Cre09g0574 . 1 209 Glutathione S-transferase Gene Family AT4G02520 55.2 2.8e-58 222.2
Cre09g0573 . 1 211 Glutathione S-transferase Gene Family AT2G02930 61.2 2.8e-66 248.8
Cre09g0575 . 1 210 Glutathione S-transferase Gene Family AT2G02930 58.2 2.0e-64 242.7
Cre09g0574 . 1 210 Glutathione S-transferase Gene Family AT2G02930 55.9 2.5e-59 225.7
Cre09g0575 . 5 206 Glutathione S-transferase Gene Family AT1G02950 53.7 1.6e-60 229.9
Cre09g0573 . 6 215 Glutathione S-transferase Gene Family AT1G02950 55.0 1.8e-59 226.5
Cre09g0574 . 5 206 Glutathione S-transferase Gene Family AT1G02950 52.2 7.2e-53 204.5
Cre09g0573 . 1 211 Glutathione S-transferase Gene Family AT1G02930 58.8 5.7e-64 241.1
Cre09g0575 . 1 210 Glutathione S-transferase Gene Family AT1G02930 55.7 2.4e-62 235.7
Cre09g0574 . 1 210 Glutathione S-transferase Gene Family AT1G02930 53.3 2.3e-57 219.2
Cre09g0573 . 1 211 Glutathione S-transferase Gene Family AT1G02920 60.2 2.3e-65 245.7
Cre09g0575 . 1 210 Glutathione S-transferase Gene Family AT1G02920 56.2 2.2e-63 239.2
Cre09g0574 . 1 210 Glutathione S-transferase Gene Family AT1G02920 54.8 2.5e-59 225.7
Cre09g0575 . 1 215 Glutathione S-transferase Gene Family AT2G47730 58.3 2.8e-68 255.8
Cre09g0573 . 4 215 Glutathione S-transferase Gene Family AT2G47730 58.2 1.7e-65 246.5
Cre09g0574 . 1 214 Glutathione S-transferase Gene Family AT2G47730 55.3 3.3e-61 232.3
Cre09g0576 . 1 214 Glutathione S-transferase Gene Family AT3G62760 57.5 9.2e-73 270.4
Cre09g0573 . 20 215 Glutathione S-transferase Gene Family AT1G49860 51.5 2.4e-48 189.5
Cre04g0857 . 3 214 Glutathione S-transferase Gene Family AT3G09270 53.8 3.6e-64 241.9
Cre05g0336 . 2 213 Glutathione S-transferase Gene Family AT3G09270 50.9 8.5e-58 220.7
Cre04g0862 . 1 222 Glutathione S-transferase Gene Family AT3G09270 52.2 2.5e-57 219.2
Cre04g0847 . 224 421 Glutathione S-transferase Gene Family AT3G09270 51.8 9.5e-57 217.2
Cre05g2601 . 1 109 Glutathione S-transferase Gene Family AT1G74590 60.6 3.9e-37 152.1
Cre07g1425 . 1 216 Glutathione S-transferase Gene Family AT1G78380 69.9 8.6e-87 317.0
Cre07g1423 . 1 214 Glutathione S-transferase Gene Family AT1G78380 70.6 1.1e-86 316.6
Cre07g1424 . 1 217 Glutathione S-transferase Gene Family AT1G78380 67.3 6.4e-82 300.8
Cre09g1687 . 4 221 Glutathione S-transferase Gene Family AT1G78380 56.4 8.9e-68 253.8
Cre07g1426 . 1 201 Glutathione S-transferase Gene Family AT1G78380 51.2 8.6e-55 210.7
Cre07g1423 . 7 214 Glutathione S-transferase Gene Family AT1G78370 64.9 3.8e-79 291.6
Cre07g1425 . 7 214 Glutathione S-transferase Gene Family AT1G78370 61.5 1.1e-73 273.5
Cre07g1424 . 7 216 Glutathione S-transferase Gene Family AT1G78370 57.1 3.2e-70 261.9
Cre09g1687 . 7 220 Glutathione S-transferase Gene Family AT1G78370 54.7 5.9e-64 241.1
Cre07g1423 . 1 214 Glutathione S-transferase Gene Family AT1G78340 64.5 1.0e-79 293.5
Cre07g1425 . 1 216 Glutathione S-transferase Gene Family AT1G78340 63.9 6.5e-79 290.8
Cre07g1424 . 1 217 Glutathione S-transferase Gene Family AT1G78340 59.4 6.3e-74 274.2
Cre09g1687 . 4 218 Glutathione S-transferase Gene Family AT1G78340 54.0 3.9e-63 238.4
Cre07g1423 . 1 216 Glutathione S-transferase Gene Family AT1G78320 53.7 4.2e-61 231.5
Cre07g1423 . 1 218 Glutathione S-transferase Gene Family AT1G17180 69.7 8.4e-90 327.0
Cre07g1425 . 1 219 Glutathione S-transferase Gene Family AT1G17180 63.5 1.7e-82 302.8
Cre07g1424 . 1 220 Glutathione S-transferase Gene Family AT1G17180 61.4 1.6e-80 296.2
Cre09g1687 . 4 224 Glutathione S-transferase Gene Family AT1G17180 55.7 1.8e-68 256.1
Cre07g1426 . 1 195 Glutathione S-transferase Gene Family AT1G17180 51.3 4.6e-56 214.9
Cre07g1423 . 3 217 Glutathione S-transferase Gene Family AT1G17190 58.1 2.4e-73 272.3
Cre07g1425 . 2 217 Glutathione S-transferase Gene Family AT1G17190 56.5 7.8e-72 267.3
Cre07g1424 . 2 218 Glutathione S-transferase Gene Family AT1G17190 53.9 6.2e-69 257.7
Cre07g1423 . 3 214 Glutathione S-transferase Gene Family AT3G43800 57.9 5.2e-71 264.6
Cre07g1425 . 3 214 Glutathione S-transferase Gene Family AT3G43800 56.5 4.9e-69 258.1
Cre07g1424 . 3 212 Glutathione S-transferase Gene Family AT3G43800 53.1 5.6e-65 244.6
Cre07g1423 . 4 218 Glutathione S-transferase Gene Family AT1G53680 58.5 6.7e-71 264.2
Cre07g1425 . 2 219 Glutathione S-transferase Gene Family AT1G53680 56.4 1.2e-67 253.4
Cre09g1687 . 1 224 Glutathione S-transferase Gene Family AT1G53680 53.9 1.0e-63 240.4
Cre07g1426 . 1 201 Glutathione S-transferase Gene Family AT1G53680 51.0 7.0e-52 201.1
Cre02g0378 . 55 221 Glutathione S-transferase Gene Family AT2G02390 68.3 1.1e-61 233.4
Cre05g0308 . 61 224 Glutathione S-transferase Gene Family AT2G02390 50.9 7.9e-44 174.1
Cre02g0378 . 14 224 Glutathione S-transferase Gene Family AT2G02380 64.9 3.1e-76 282.0
Cre05g0308 . 18 223 Glutathione S-transferase Gene Family AT2G02380 52.6 1.6e-56 216.5
Cre07g1161 . 35 271 Glutathione S-transferase Gene Family AT5G41210 68.4 1.5e-92 336.3
Cre07g1161 . 35 271 Glutathione S-transferase Gene Family AT5G41240 66.7 1.7e-89 327.4
Cre10g2181 . 1 235 Glutathione S-transferase Gene Family AT5G02780 66.5 1.9e-87 319.3
Cre10g2180 . 13 232 Glutathione S-transferase Gene Family AT5G02780 68.9 2.8e-83 305.4
Cre02g1689 . 75 294 Glutathione S-transferase Gene Family AT5G02780 65.8 3.8e-80 295.0
Cre02g1689 . 29 292 Glutathione S-transferase Gene Family AT3G55040 61.1 1.3e-85 313.5
Cre10g2181 . 6 233 Glutathione S-transferase Gene Family AT3G55040 60.1 2.5e-78 289.3
Cre10g2180 . 3 234 Glutathione S-transferase Gene Family AT3G55040 58.4 9.7e-78 287.3
Cre10g2181 . 1 235 Glutathione S-transferase Gene Family AT5G02790 68.9 7.8e-94 340.5
Cre10g2180 . 7 232 Glutathione S-transferase Gene Family AT5G02790 69.2 2.0e-89 325.9
Cre02g1689 . 67 294 Glutathione S-transferase Gene Family AT5G02790 62.9 4.0e-82 301.6
Cre02g1663 . 1 212 Glutathione S-transferase Gene Family AT1G19570 65.7 1.5e-80 296.2
Cre05g1317 . 65 272 Glutathione S-transferase Gene Family AT1G19570 58.9 3.4e-72 268.5
Cre02g1663 . 1 211 Glutathione S-transferase Gene Family AT1G75270 69.8 5.4e-86 314.3
Cre05g1317 . 65 272 Glutathione S-transferase Gene Family AT1G75270 62.2 4.3e-75 278.1
Cre05g1317 . 9 274 Glutathione S-transferase Gene Family AT5G16710 68.3 7.7e-103 370.5
Cre02g1663 . 3 210 Glutathione S-transferase Gene Family AT5G16710 59.1 5.4e-72 268.1
Cre11g2016 . 510 765 Glutathione S-transferase Gene Family AT1G77290 69.5 7.2e-104 374.0
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0007926 1 1 1 1 1 1 2 1 1 1 1 1 2 1 1 2 1 1 2 1 1 1 1 1 1 1 1 1 3 1 36