Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre07g1171 ATGAAAAACAGGAGATGCTTTCTTCTTGCTCTCTTCTTCTATGCCTCAATCTTTGAGAAACTGACTGTAAAACCAGAGGCAAGTGGCAAGCTTCTTCATATCGTACACCTCGAACATAACCAACATGATCCCAACTCCAGCATCGTCGAGATTCATCATAATTTCTTGTCTACTCTGCTGGGAAGTAAAAAGAAGGCTTCGAAATCCATGGTGTACAGTTATACACATGCCTTTTCTGGATTTGCTGCAAAGCTCACAAAATCTCAAGCTTATCAGCTTTCTGAAATGCGTGGTGTGGTTCGAGTTCTTCCAAATGTTCTTTACGATCTCCATACAACTAGAAGCTGGGATTTTCTCGGCCTTTCTCCTTCTCCATCTCCCTCAAATCTTCTGCAGATGAGTAATTTGGGTGACGGGATAATCATTGGAGTAGTGGATACAGGAATTTGGCCGGAATCGGAGGCGTTCGACGATCAAGGATTGGGGCCGGTGCCAGCTCGGTGGAAAGGCGAGTGCCAATCAGGGGAACAATTCAAAGCGACGAGAGATTGCAATAGAAAAATCATAGGAGCCAAATGGTACGTTGATGGGTTCATAGCCGAATTTGGGGAATTCAACAGATCAGCAGTGAAGGAATTCATGTCTTCAAGAGATTCAAACGGACATGGGACTCAAACGGCGAGCACCGCCGCCGGTTCGTTCGTGAAAAATGTCAGTTACAGAGGCCTCGGCGGTGGGACTGCAAGGGGCGGCGCACCAGCAGCGCGGTTGGCAGTGTACAAGGCATGTTGGAGCTTGCCCGGTGGCGGTGGCCAGTGTTCGGCGGCGGACGTATTGAAGGGAATGGACGACGCCGTACACGACGGCGTTGATGTATTGTCTCTATCTTTGGGGAAGAGTGCTCCTCTGTTTGCGGAGGTGGATGAAGAGAACGTGGTTGCGATTGGGTCATTCCGGGCAAACATGAGGAATATTTCGGTGGTCTGTTCCGCCGGTAACGACGGGCCTTCTGCAGAGACGGTGGTCAACACTTCCCCTTGGATCTTGAGTGTTGCTGCAACTTCTATTGACAGAACTTTTTTGGGCTCTATTACTCTTGGAAATAACAACACTTTTCTGAGTCAAACCCTATACACTAGAAAGGAGATTGGATATAGTGGCTTGGTATATCCAAGGTCTGGGTTGAACCAGATCATCGCAGGGTTATGTGATTCAATAACATTAGTGAATGGTAGTAATTGGATGAGTGGAAAAGTGGTTCTCTGCTTCAGCACAATGGTGGGGATGAATCCAATAGCCATAACAAGAGCTATGGAAGCTGTGAAAGCAGGAAATGGCTTGGGGTTAATTGTTGCTAGGCATCCTGATGATATCTGGTTTACATGTGACAATGATTTCCCTTGTTTTCAAGTCAATTTTGAAGTTGGCACCAAAATCTTCTATTACATCCGGGCAACAAGTTCTCCAATGGTGAAGCTGAGCCCTTCAAGGACCATCACAGGCAACCCCATTTCAGCACATATGGCATACTTCTCATCAAGAGGTCCCAATTCTGTTGCACCAGCAATTCTGAAGCCAGATATTGGTGCACCAGGTGTGGCAATATTAGTAGCCACTTCCCCATTTGACATAACAAATGATGGAGGTTTTACCATACAAACAGGAACTTCCATAGCAACCCCTCATATTTCAGCCATTGTGGCTCTTCTCAAGTCACTTCATCCTAGTTGGTCTCCTGCTGCCATCAAATCTGCCATTATCACAACTGCATGGAGCAGGCATCCTTCTGGGGTACCAATTCTGGCTGAAGGATCTCCACATAAACTTGGCAATCCATTTGACTATGGAGGAGGAATTGTTAACCCAAATGCAGCTGCAAACCCAGGCCTCATTTACGACATGTCGACTTCCGATTACATCTCTTACTTTTGCTCAATGGGCTACAAAAACTCTGCCATATCTTTTCTAACAGAGCAAAAAACAGAGTGCCCATCAAAACCCCAAATTTCTTTGTTGGATCTTAATCTACCTTCCATAACACTCCCAGCACTTACAAACTCAACCACTATCACTCGAACTGTCACTAATGTTGGTAATTTGACCTCCATTTACAAAGCTTTGATTCACCCTCCAATGGGAATCAATGTCACTGTGGACCCTCTTGTCTTACTCTTCAATGCTACTGTCACCAATTTGTCCTTCAAGGTTATGATTTCAACCCTTTTAGAGATGGATTATGGTTTTTCTTTCGGAGCTATCATTTGGAGTGATGGAGTGCATCTTGTTAAAACTCCATTGTCAGTTAGAACTCAAATTCTACATTCTTCTACATAG 2334 45.2 MKNRRCFLLALFFYASIFEKLTVKPEASGKLLHIVHLEHNQHDPNSSIVEIHHNFLSTLLGSKKKASKSMVYSYTHAFSGFAAKLTKSQAYQLSEMRGVVRVLPNVLYDLHTTRSWDFLGLSPSPSPSNLLQMSNLGDGIIIGVVDTGIWPESEAFDDQGLGPVPARWKGECQSGEQFKATRDCNRKIIGAKWYVDGFIAEFGEFNRSAVKEFMSSRDSNGHGTQTASTAAGSFVKNVSYRGLGGGTARGGAPAARLAVYKACWSLPGGGGQCSAADVLKGMDDAVHDGVDVLSLSLGKSAPLFAEVDEENVVAIGSFRANMRNISVVCSAGNDGPSAETVVNTSPWILSVAATSIDRTFLGSITLGNNNTFLSQTLYTRKEIGYSGLVYPRSGLNQIIAGLCDSITLVNGSNWMSGKVVLCFSTMVGMNPIAITRAMEAVKAGNGLGLIVARHPDDIWFTCDNDFPCFQVNFEVGTKIFYYIRATSSPMVKLSPSRTITGNPISAHMAYFSSRGPNSVAPAILKPDIGAPGVAILVATSPFDITNDGGFTIQTGTSIATPHISAIVALLKSLHPSWSPAAIKSAIITTAWSRHPSGVPILAEGSPHKLGNPFDYGGGIVNPNAAANPGLIYDMSTSDYISYFCSMGYKNSAISFLTEQKTECPSKPQISLLDLNLPSITLPALTNSTTITRTVTNVGNLTSIYKALIHPPMGINVTVDPLVLLFNATVTNLSFKVMISTLLEMDYGFSFGAIIWSDGVHLVKTPLSVRTQILHSST 777
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 24146915 24151764 + CrPI670011_07g011710.1 Cre07g1171 503752
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre07g1171 777 Pfam Subtilase family 137 595 IPR000209 GO:0006508(InterPro)|GO:0008236(InterPro)
Cre07g1171 777 Gene3D - 357 500 - -
Cre07g1171 777 ProSitePatterns Serine proteases, subtilase family, serine active site. 555 565 IPR023828 -
Cre07g1171 777 ProSiteProfiles Serine proteases, subtilase domain profile. 115 626 - -
Cre07g1171 777 PRINTS Subtilisin serine protease family (S8) signature 554 570 IPR015500 -
Cre07g1171 777 PRINTS Subtilisin serine protease family (S8) signature 137 156 IPR015500 -
Cre07g1171 777 PRINTS Subtilisin serine protease family (S8) signature 218 231 IPR015500 -
Cre07g1171 777 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 33 765 IPR045051 -
Cre07g1171 777 CDD Peptidases_S8_3 108 591 IPR034197 -
Cre07g1171 777 SUPERFAMILY Subtilisin-like 38 695 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Cre07g1171 777 FunFam Subtilisin-like protease SBT1.5 139 366 - -
Cre07g1171 777 Gene3D - 643 771 - -
Cre07g1171 777 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 18 111 IPR037045 -
Cre07g1171 777 Gene3D Peptidase S8/S53 domain 139 639 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Cre07g1171 777 Pfam Fibronectin type-III domain 673 768 IPR041469 -
Cre07g1171 777 Pfam Peptidase inhibitor I9 33 111 IPR010259 -
Cre07g1171 777 FunFam Subtilisin-like protease SBT1.5 643 771 - -
Cre07g1171 777 CDD PA_subtilisin_like 363 493 - -
Cre07g1171 777 FunFam Subtilisin-like protease SBT5.3 22 111 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre01g1144 Cre-Chr1:22586199 Cre07g1171 Cre-Chr7:24146915 1.80E-158 dispersed
Cre07g1171 Cre-Chr7:24146915 Cre10g0634 Cre-Chr10:5919773 1.00E-134 dispersed
Cre07g1171 Cre-Chr7:24146915 Cre09g0097 Cre-Chr9:1216869 3.50E-135 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre07g1171 - - - 0.0