Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre07g1238 ATGGCTCAATCTCGGAGCTTACTCTTTGCATTTGCTCTTCTTGCCTTGGCTTCGGTTGCTTTCTCTCACAAGATTGGCGGTGGTGGCGGTGGCGGCGGCGGCGGCGGCGGCGGCTATTATTTGTATCCTCAATTCTATGACCATTCTTGTCCGAGAGCTCAAGAGATAGTGAAGTCCATAGTGGCTAAGGCTTTTGCAAAGGAAGCTCGTATTGCTGCTTCCTTGCTTAGGCTTCATTTCCATGATTGTTTTGTGAAGGGCTGTGATGCTTCACTGTTGTTAGATAGCAGTGGGAAAATAGCCAGTGAGAAAAGGTCAAATCCAAACAGAAACTCTGCTAGAGGCTTTGAAGTCATTGATGAGATCAAATCTGCCTTGGAAAAGGAGTGTCCTCAAACTGTTTCTTGTGCTGATATTTTGGCCATTGCTGCTAGAGACTCCACAGTCATAACTGGAGGACCCAGTTGGGAAGTTCCACTTGGAAGAAGGGACTCAAGAGGAGCAAGTCTAAGTGGCTCTAACAATGACATTCCTGCTCCAAACAACACTTTCCAAACCATTCTCACCAAGTTCAAAAGACAAGGCCTTGATATTGTTGATCTTGTTGCTCTTTCAGGAAGCCACACCATTGGAAATTCCCGATGCACCAGCTTCAGGCAACGTCTCTACAACCAATCTGGCAATGCCCAGCCCGATCCCTCCCTCGATCCATCATACGCCGCTGAATTGCGCAAGGGATGCCCGAGATCAGGGGGTGACCAGAACCTGTTTTTCCTGGACTTTGTGAGCCCTACCAAGTTCGACAACTACTACTTTAAGAATCTTTTGGCTGCAAAGGGTCTGCTGAACTCAGATCAAGTTCTTTTGACAAAAAACTTGCAATCAGCGGAATTGGTGAGGACATATGCAGAGAATTCTGAGATCTTTTTTGAGCAATTTGCTAAGTCCATGGTTAAGATGGGAAACATTTCTCCTCTCACTGGTTCAAGGGGAGAGATCAGAAAGCACTGCAGAAAAGTTAACAAAAATTAG 1032 46.12 MAQSRSLLFAFALLALASVAFSHKIGGGGGGGGGGGGGYYLYPQFYDHSCPRAQEIVKSIVAKAFAKEARIAASLLRLHFHDCFVKGCDASLLLDSSGKIASEKRSNPNRNSARGFEVIDEIKSALEKECPQTVSCADILAIAARDSTVITGGPSWEVPLGRRDSRGASLSGSNNDIPAPNNTFQTILTKFKRQGLDIVDLVALSGSHTIGNSRCTSFRQRLYNQSGNAQPDPSLDPSYAAELRKGCPRSGGDQNLFFLDFVSPTKFDNYYFKNLLAAKGLLNSDQVLLTKNLQSAELVRTYAENSEIFFEQFAKSMVKMGNISPLTGSRGEIRKHCRKVNKN 343
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 25883449 25885561 + CrPI670011_07g012380.1 Cre07g1238 503819
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre07g1238 343 Gene3D - 45 341 - -
Cre07g1238 343 PRINTS Haem peroxidase superfamily signature 260 275 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre07g1238 343 PRINTS Haem peroxidase superfamily signature 72 86 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre07g1238 343 PRINTS Haem peroxidase superfamily signature 134 151 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre07g1238 343 PRINTS Haem peroxidase superfamily signature 152 164 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre07g1238 343 PRINTS Haem peroxidase superfamily signature 200 215 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre07g1238 343 SUPERFAMILY Heme-dependent peroxidases 41 341 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre07g1238 343 FunFam Peroxidase 44 186 - -
Cre07g1238 343 PANTHER PEROXIDASE 72-RELATED 12 340 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre07g1238 343 FunFam Peroxidase 178 320 - -
Cre07g1238 343 PRINTS Plant peroxidase signature 133 143 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre07g1238 343 PRINTS Plant peroxidase signature 258 273 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre07g1238 343 PRINTS Plant peroxidase signature 274 291 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre07g1238 343 PRINTS Plant peroxidase signature 199 211 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre07g1238 343 PRINTS Plant peroxidase signature 114 127 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre07g1238 343 PRINTS Plant peroxidase signature 74 94 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre07g1238 343 PRINTS Plant peroxidase signature 50 69 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre07g1238 343 PRINTS Plant peroxidase signature 152 167 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre07g1238 343 PRINTS Plant peroxidase signature 315 328 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre07g1238 343 ProSitePatterns Peroxidases active site signature. 72 83 IPR019794 GO:0004601(InterPro)
Cre07g1238 343 ProSiteProfiles Plant heme peroxidase family profile. 40 341 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre07g1238 343 CDD secretory_peroxidase 41 340 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Cre07g1238 343 ProSitePatterns Peroxidases proximal heme-ligand signature. 200 210 IPR019793 -
Cre07g1238 343 Gene3D Peroxidase, domain 2 178 321 - -
Cre07g1238 343 Pfam Peroxidase 57 305 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre04g0981 Cre-Chr4:28411569 Cre07g1238 Cre-Chr7:25883449 2.90E-51 dispersed
Cre07g1238 Cre-Chr7:25883449 Cre11g1063 Cre-Chr11:8063455 1.20E-87 dispersed
Cre11g1193 Cre-Chr11:9770968 Cre07g1238 Cre-Chr7:25883449 1.70E-59 dispersed
Cre06g1205 Cre-Chr6:5909996 Cre07g1238 Cre-Chr7:25883449 1.20E-78 transposed
Cre07g2073 Cre-Chr7:36282642 Cre07g1238 Cre-Chr7:25883449 5.40E-80 transposed
Cre09g1192 Cre-Chr9:14068796 Cre07g1238 Cre-Chr7:25883449 1.50E-87 transposed
Cre04g1605 Cre-Chr4:34520778 Cre07g1238 Cre-Chr7:25883449 3.50E-148 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre07g1238 K00430 - csv:101223204 606.675