Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cre07g1255 | ATGACATTCCATTTTCCGTCAATGGATTTCATTTTGCAAAATATTCAGAGTTCGCCATTGCTATTCTTCATAGTGCCTCTAGTGCTCCTTCTTCTCACTTCTGTTCTCCGGCGGCCGCCGCGGCTGCCACTCCCTCCGGGGCCTAAAGGGCTACCCATCATCGGCAATATGCGGATGATAGACCAACTCACCCACCGTGGACTTGCCGCCATGGCCAAACGGTATGGCGGAATCTTCCACCTCCGCATCGGCTTCCTCCACATGGTTGCCATTTCCGACCCCGATGTTGCTCGGAATGTTCTTCAGGTACAAGATCTAGTGTTTTCAAACCGTCCAGCAACCAAAGCCATAAAGTACTTAACATACGAGCGAGCCGACATGGCGTTCGCTCACTACGGCCCATTCTGGCGACAAATGAGAAAAGTGTGTGTCATGAAATTATTCAGCCGCAAGCGAGCCGAGTCTTGGGCATCGGTTCGACATGAGGTTCATAATCTCATCACCACAATTGCCAACAACACACAAACCCCTCTCAACCTTGGCCACTTAATCTTCACAATGAGCATTAATATAATTTACAGGGCTGCCTTTGGGACAATCGAACCACAACACCAATCCCAATTCATCAAAATACTGGAAGAATTCTCCAAGCTTTTTGGAGCTTTCAATGCTGCTGATTTTTTCCCTTGTCTTGCCTGGATCGATCCTCAAGGTCTCACTCCTAGACTTGTCGAGGCTCGTCGATCTCTCGACTGGTTCATTGATAGAATCATTGACCAACATTTGGTGAACAGGAAGAAAATAGAGGAAATTGATAAGGACATGGTTGATGAGCTACTAGCTTTCTATAGTGAAGATGGCGGAGGAAATAACGAAAGTGAGTTAGAGGATTTGCAATTGCAAAATGCTATTAAACTCACTAGAGACAATATCAAAGCCATCATAATGGACGTAATGTTTGGCGGCACAGAAACAGTTGCCTCCGCCATAGAATGGGCCATGGCGGAGCTCATGAAGAACCCCGATGACCTCAACAAACTTCAACAAGAACTCACCGCTGCCGTCGGCCTTCACCGGTGTCCACAAGAATCCAACTTAGAGAATCTAACATACCTAAAATGCATTCTCAAGGAAACTCTCCGGCTCCACCCACCCATTCCGCTACTCCTCCACGAGACGGCCGCCGAAACGGAACTCGCCGGCTACCGGATTCCTGCGAAGTCCCGCGTCTTCATCAACGCATGGGCACTCGGGCGGGACGAGAAGTCGTGGGTGGACCCAAACAGTTTCCGGCCGGAGAGGTTCGAAAGCAACGGCGCCGCCGACTTCAAAGGCGGGAACTTTGAGTTCATTCCATTCGGGTCGGGCCGTCGGTCTTGCCCCGGAATGCAGCTGGGGACTTACACGGTGGAGATGGCGGTAGCGAATTTGGTACATTGTTTCCGGTGGGAGTTGCCGGAGGGGATGAAGCCCGGGGAGTTGGATATGAATGACGTTTTTGGACTCACTGCGCCCAGAGCGAGTCGACTCGTGGCTATTCCGTACAAGAGAGTTGTTTGTAGTTTGGACTGA | 1572 | 50.19 | MTFHFPSMDFILQNIQSSPLLFFIVPLVLLLLTSVLRRPPRLPLPPGPKGLPIIGNMRMIDQLTHRGLAAMAKRYGGIFHLRIGFLHMVAISDPDVARNVLQVQDLVFSNRPATKAIKYLTYERADMAFAHYGPFWRQMRKVCVMKLFSRKRAESWASVRHEVHNLITTIANNTQTPLNLGHLIFTMSINIIYRAAFGTIEPQHQSQFIKILEEFSKLFGAFNAADFFPCLAWIDPQGLTPRLVEARRSLDWFIDRIIDQHLVNRKKIEEIDKDMVDELLAFYSEDGGGNNESELEDLQLQNAIKLTRDNIKAIIMDVMFGGTETVASAIEWAMAELMKNPDDLNKLQQELTAAVGLHRCPQESNLENLTYLKCILKETLRLHPPIPLLLHETAAETELAGYRIPAKSRVFINAWALGRDEKSWVDPNSFRPERFESNGAADFKGGNFEFIPFGSGRRSCPGMQLGTYTVEMAVANLVHCFRWELPEGMKPGELDMNDVFGLTAPRASRLVAIPYKRVVCSLD | 523 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 7 | 26308016 | 26311516 | - | CrPI670011_07g012550.1 | Cre07g1255 | 503836 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cre07g1255 | 523 | PRINTS | E-class P450 group I signature | 96 | 117 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre07g1255 | 523 | PRINTS | E-class P450 group I signature | 330 | 356 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre07g1255 | 523 | PRINTS | E-class P450 group I signature | 460 | 483 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre07g1255 | 523 | PRINTS | E-class P450 group I signature | 310 | 327 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre07g1255 | 523 | PRINTS | E-class P450 group I signature | 450 | 460 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre07g1255 | 523 | PRINTS | E-class P450 group I signature | 413 | 437 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre07g1255 | 523 | PRINTS | E-class P450 group I signature | 373 | 391 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre07g1255 | 523 | PRINTS | E-class P450 group I signature | 72 | 91 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre07g1255 | 523 | SUPERFAMILY | Cytochrome P450 | 45 | 517 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre07g1255 | 523 | CDD | CYP71-like | 74 | 510 | - | - | |
| Cre07g1255 | 523 | PRINTS | P450 superfamily signature | 451 | 460 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre07g1255 | 523 | PRINTS | P450 superfamily signature | 321 | 338 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre07g1255 | 523 | PRINTS | P450 superfamily signature | 374 | 385 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre07g1255 | 523 | PANTHER | CYTOCHROME P450 84A1-RELATED | 18 | 522 | IPR053062 | GO:0004497(PANTHER) | |
| Cre07g1255 | 523 | FunFam | Cytochrome P450 84A1 | 37 | 516 | - | - | |
| Cre07g1255 | 523 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 453 | 462 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Cre07g1255 | 523 | Gene3D | Cytochrome P450 | 33 | 516 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre07g1255 | 523 | Pfam | Cytochrome P450 | 45 | 506 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cre02g0830 | Cre-Chr2:5083662 | Cre07g1255 | Cre-Chr7:26308016 | 1.50E-177 | dispersed | |
| Cre07g1255 | Cre-Chr7:26308016 | Cre07g1773 | Cre-Chr7:33204851 | 4.00E-98 | dispersed | |
| Cre10g2057 | Cre-Chr10:35268139 | Cre07g1255 | Cre-Chr7:26308016 | 4.40E-81 | transposed | |
| Cre04g1623 | Cre-Chr4:34649634 | Cre07g1255 | Cre-Chr7:26308016 | 1.10E-196 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cre07g1255 | K09755 | - | mdm:103400991 | 687.182 |