Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre07g1260 ATGCAAAAGAAAGAAAAAGAAACCCCACACCAAAAAGATCAGATCAAAACAAGTTTTTCCAAGACAAAGATGGAAGCCAATTTGGAGGTGCTGAGGGAAAGCTTCAAAAATGGAAGAACAAGGAGTTTCGAATGGAGGAAAAACCAGCTGAGTTCTCTGATTCAGTTCATCCATGACAAAGAAAACGTCATTTTTGAAGCCCTCTATCAAGATCTTGGCAAGCATCCTGTGGAAATTTTCCGAGATGAGGTTGGAATTGTTCTGAAATCTGCAAACAATGCTCTCTGCTCTTTACACAAATGGATGGCCCCTAAAAAGAAATCTGTGCCATTACTATTCTTCCCAGCAAAAGGAGAAGTTTTGTCTGAGCCATTTGGTCTGGTCCTCATAATTTCATCTTGGAATTTCCCCCTTTCTTTGGCATTGGATCCGTTAATTGGAGCGATATCCGCGGGCAACACGGCGGTTATAAAACCGTCGGAATATACTCCTGTTTTCTCCTCTTTTCTTGCTGCAACAATCCCTCTTTACCTTGATAATAAAGCTATCAAAGTTGTTGAGGGTGGAGCTGATGTTACTGAACAACTTCTACAGCACAAATGGGATAAGATCTTCTTCACTGGGAGTCCAAAGGTAGGTAGGATTGTGATGTCTGCAGCTGCAAAGCATCTAACTCCTGTTACTTTAGAGCTCGGGGGAAAATGTCCTGCAATCTTTGATTACTCCTCTGTCCATTCCGATATGAAGGTAGCGGCCAAGAGAATCGTTGGAGGAAAATGGGGGCTGTGCGCCGGGCAGGCGTGCATAGGGATAGATTATGTGCTTGTGGAGGATAAGTTTGCTTCAGAATTGATCGAGTCATTAAAGCGAATACTCAAGAAGTTTTACGGTGAAAACTCGAAAAACTCGACGAGCATAGCCCGAATTGTTAATGAGAAAAATGTTGAAAGAATAAGCAATCTTCTCAAAGACCCTAAGGTTGCTGCTTCCATTGTCCATGGTGGCTCTATTGACAAAGAAAAACTCTTCATTGAGCCAACAATATTGTTGAATCCTCCAATCGACGCTGATATCATGACCGAAGAAATCTTCGGTCCCCTGCTACCGATAATCACATTGAACAAAATTGAAGAAAGCATTGAGTTCATCAACGCAAGACCAAAACCTCTTGCTCTCTATGCCTTCACAGGAGACGAAACTCTCAAGAAACGGATTTTATCCGAAACATCATCCGGAAGTGTCACATTCAATGATACCGTGGTTCAGTTTGTGTGTGATTCGCTACCATTCGGCGGTGTTGGTCAGAGCGGTTTCGGGAGTTATCATGGCAAGTATTCATTTGATACATTCAGCCATGAAAAAGCAGTGATGCAGAGAAGCTTTTTGATAGAACTCGACCCACGATATCCACCATGGAACGATTTCAAGCTCAAGTTCATTAGATTGGCATATCGATTCGACTATTTAGGGCTGGTGCTGCTCTTTTTGGGGTTAAAGAAGTAG 1503 42.45 MQKKEKETPHQKDQIKTSFSKTKMEANLEVLRESFKNGRTRSFEWRKNQLSSLIQFIHDKENVIFEALYQDLGKHPVEIFRDEVGIVLKSANNALCSLHKWMAPKKKSVPLLFFPAKGEVLSEPFGLVLIISSWNFPLSLALDPLIGAISAGNTAVIKPSEYTPVFSSFLAATIPLYLDNKAIKVVEGGADVTEQLLQHKWDKIFFTGSPKVGRIVMSAAAKHLTPVTLELGGKCPAIFDYSSVHSDMKVAAKRIVGGKWGLCAGQACIGIDYVLVEDKFASELIESLKRILKKFYGENSKNSTSIARIVNEKNVERISNLLKDPKVAASIVHGGSIDKEKLFIEPTILLNPPIDADIMTEEIFGPLLPIITLNKIEESIEFINARPKPLALYAFTGDETLKKRILSETSSGSVTFNDTVVQFVCDSLPFGGVGQSGFGSYHGKYSFDTFSHEKAVMQRSFLIELDPRYPPWNDFKLKFIRLAYRFDYLGLVLLFLGLKK 500
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 26490044 26492414 + CrPI670011_07g012600.1 Cre07g1260 503841
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre07g1260 500 Pfam Aldehyde dehydrogenase family 19 456 IPR015590 GO:0016491(InterPro)
Cre07g1260 500 PIRSF ALDH 10 493 IPR012394 GO:0006081(InterPro)
Cre07g1260 500 FunFam Aldehyde dehydrogenase 32 242 - -
Cre07g1260 500 FunFam Aldehyde dehydrogenase 233 436 - -
Cre07g1260 500 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 32 454 IPR016162 GO:0016491(InterPro)
Cre07g1260 500 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 233 436 IPR016163 GO:0016620(InterPro)
Cre07g1260 500 PANTHER ALDEHYDE DEHYDROGENASE 22 497 IPR012394 GO:0004029(PANTHER)|GO:0005737(PANTHER)|GO:0006081(InterPro)|GO:0006081(PANTHER)
Cre07g1260 500 SUPERFAMILY ALDH-like 25 472 IPR016161 GO:0016491(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre02g2627 Cre-Chr2:39531211 Cre07g1260 Cre-Chr7:26490044 1.10E-163 dispersed
Cre07g1260 Cre-Chr7:26490044 Cre11g1995 Cre-Chr11:31723262 1.50E-134 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre07g1260 K00128 - csv:101221321 872.078