Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre07g1288 ATGGCGTATATGTGCGCAGACAGTGGCAATCTAATGGCAATTGCCCAACAACTCATCAACCAAAAACAACACCAACACCAAGACCAACATCAACATCTTTCTCCACTTACCACTCCTTTTTCTCTTCTTCCTTGCACTAATAACAATCCTTCCCCTTCCCCAACTATGGCTTCTTCTTCTTCTTCTCCTAATTTCTCCTTCGGGATTTCTGCTTCTGCTTTCTCTGATCCTTTTCAGGTCGCCGGACCCCCCGATTCTGCCGACCCATCTTTTCATTTCTCTAATTTGGACCACCCTTCTGCTGCCTTTAGGTTTTTCCCTAATTTTGGCGATGCCACCGGTGGAGAGTTTGAATCTGATGAGTGGATGGATAGTTTAGTAGGCGGTGGAGATTCCACGTATAGCTCAAATTTGCCGTCTGCTTGCGATGCTTATGGTGAGTTTGGTCTCTATGGTACAGATCCCTTTAATGGCTCTCCCAGAAGACTTACTGTCGCTTGCTCTCCGCCATCTGAGTTGATCAACCGAGTTGTTCTCCCGGAAAGTTCATACAAAATGAATAGTGTTCCGCCACCATGGCCATCATCTCCACAGTTGGTAAAGGATGATGGAGCAACCAATCCACCGGTGGAGAGGTCGGTGAAGAATGATGACGTTGTTGAAGGCTCGTCGAGTGCGGAAGAGGTTGATTCATCGTCGCCGCTTCTGAAAGTCTTGCTCGATTGTGCGCGGCTCTGCGATTCTGAACCCAACCGAGCAGCGAAAGGTCTTAATCGGATTAGTAAATCGTTACGAGAAGATGGAGATCCGGCTGAACGAGTGGCGTTTTACTTCGGCGAGGCTCTTCGGAAGAGATTATCCTTGACGGTGATGAAGAATTGCTTGGATAAAACTGAGAGTGATGCTAATTCTGAAGATTTCTTGCTCTCTTACAAAGCTCTGAACGACGCCTGTCCTTACTCCAAGTTCGCGCATCTAACAGCCAACCAAGCAATTCTGGAAGCTACAGAGAGAGCAAGTAAAATTCACATTGTCGACTTCGGAATCGTTCAAGGTGTTCAATGGGCGGCGCTTCTGCAGGCTTTGGCCACGCGAGCCACTGGAAAGCCTATCAGAGTTCGTATCTCCGGAATACCAGCGCCGTCGCTCGGAGATTCACCGGCAGCGTCCCTATACGCCACTGGCAATAGACTCTCCGAGTTCGCAAAGCTTCTAGAACTGAATTTCGAGTTCGAACCGATTCTAACGCCGATTGAGAACCTGAACGAATCGAGCTTTAGCGTTCAATCAGACGAGGTATTGGCCGTGAATTTCATGCTTCAATTGTATAATCTCCTCGACGAGGATCCAGCTGGAGTTCATAATGCTCTTCGATTAGCAAAATCGTTGAGCCCTCAAATAGTGACTCTCGGCGAGTACGAGGCGGGTTTGAACCGGATCGGATTCTACAATCGCTTCAAGAACGCATTGAAATTCTACTCCGCCATTTTCGAATCGCTAGAGCCGAATTTGCCTCGAGACTCGCCAGAAAGACTCCAGTTAGAAAAACTGTTACTCGGCCGTCGAATCGCCGGCGTGGTTGGAACCGAAGAAGATTCAAGAAACAAAAGAAGAGTACGCATGGAAGACAAAGATCAATGGAAGAATTTGATGGAAAGCGCCGGATTCGAACCTGTAGCACTCAGCCATTACGCCATTAGTCAGGGGAAAATACTTTTATGGAACTACAATTACAGTTCTCTCTACACTCTGATCGAATCGGCGCCGGAGTTTCTGTCGCTGGCATGGAACGACGTTCCTCTCTTAACTGTATCTTCCTGGCGTTGA 1827 47.84 MAYMCADSGNLMAIAQQLINQKQHQHQDQHQHLSPLTTPFSLLPCTNNNPSPSPTMASSSSSPNFSFGISASAFSDPFQVAGPPDSADPSFHFSNLDHPSAAFRFFPNFGDATGGEFESDEWMDSLVGGGDSTYSSNLPSACDAYGEFGLYGTDPFNGSPRRLTVACSPPSELINRVVLPESSYKMNSVPPPWPSSPQLVKDDGATNPPVERSVKNDDVVEGSSSAEEVDSSSPLLKVLLDCARLCDSEPNRAAKGLNRISKSLREDGDPAERVAFYFGEALRKRLSLTVMKNCLDKTESDANSEDFLLSYKALNDACPYSKFAHLTANQAILEATERASKIHIVDFGIVQGVQWAALLQALATRATGKPIRVRISGIPAPSLGDSPAASLYATGNRLSEFAKLLELNFEFEPILTPIENLNESSFSVQSDEVLAVNFMLQLYNLLDEDPAGVHNALRLAKSLSPQIVTLGEYEAGLNRIGFYNRFKNALKFYSAIFESLEPNLPRDSPERLQLEKLLLGRRIAGVVGTEEDSRNKRRVRMEDKDQWKNLMESAGFEPVALSHYAISQGKILLWNYNYSSLYTLIESAPEFLSLAWNDVPLLTVSSWR 608
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 27006836 27008662 + CrPI670011_07g012880.1 Cre07g1288 503869
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre07g1288 608 ProSiteProfiles GRAS family profile. 226 608 IPR005202 -
Cre07g1288 608 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 228 607 IPR005202 GO:0003700(PANTHER)|GO:0005634(PANTHER)|GO:0006355(PANTHER)|GO:0043565(PANTHER)
Cre07g1288 608 MobiDBLite consensus disorder prediction 185 228 - -
Cre07g1288 608 MobiDBLite consensus disorder prediction 22 60 - -
Cre07g1288 608 Pfam GRAS domain family 236 608 IPR005202 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre07g1288 Cre-Chr7:27006836 Cre11g1204 Cre-Chr11:9983798 1.30E-55 dispersed
Cre07g1288 Cre-Chr7:27006836 Cre04g1560 Cre-Chr4:34204842 2.20E-161 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
54041 PF03514 GRAS 3.90E-108 CL0063 Cre TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre07g1288 - - - 0.0