Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre07g1311 ATGTCGGTCGCTAACGCCGACACATCTCTGACTATGTCGGACGTCTCGACAGTCGAGAAAAGCAGCCCGGCGGAGAGGGCTGAGTGGGTGGCAAACCCACCAGAGCCGCCAGGGATATGGCGAGAGGTAATCGAGTCTCTCCGTGACACCATGTTTCCCGATCCGAACAAGCTTTCGTCCCTTAAGAACAAGACCGGAACTGCGGTGGTTGGAAGCCTCTTGCAGGGTGTGTTCCCTATCCTCTGCTGGGGACAGAGCTACAATCTGGGGAAGTTCAAGAATGACATCTTGGCTGGTTTGACCCTGGCTAGCCTCTGCATTCCCCAGAGTATTGGATATGCAAATCTGGCTAAACTTGATCCTCAATATGGGCTGTATACAAGCATTGTGCCACCGCTGGTTTATGCAGTGTTGGGAAGTTCGAGGGAAATAGCAATCGGACCGGTGGCCATAGTATCTCTACTTTTGCCGTCAATGATTCAGAAAATTCAAGATCCCGCCGCCGACCCTCTTGCCTACAAAAACCTTGTCTTCACCGTCACTTTCTTCGCCGGAATCTTTCAGGCCGCCTTTGGACTCTTTCGGCTGGGGTTTTTGGTGGATTTTCTGTCACATGCTGCCATAGTTGGGTTCATGGGTGGAGCTGCCATTGTAATTGGGCTTCAACAGCTCAAAGGATTGCTTGGCATCACTCACTTCACTAACAAAACTGATATTCTATCTGTTATGGAAGCTGTGTTTGGATCATTCCATCATCATAATGATCAATGGAATCCCTTCAACTTCATCATTGGCTCTTCATTCCTGTCCTTCATCCTCATCACCAAATTATTGGGGAATAAGTACAAGAAAGTATTCTGGTTAGCTGCCATAGCTCCACTGTTGTGTGTAATCCTATCGACGCTTTTGGTGTTCCTCACAAGAGCCGACCGGCAGGGCGTGAAGATCGTCAAACGAGTCCCCGCCGGCCTGAACCCCATCTCGGCTCGCCACATCCAAATCCACTCCCCTCACTTCTCCCAAATCCTCAACGCCGCCTTCATCGTGGCCGTCATAGCCCTCACGGAGGCCATTGCTGTGGGGAGGTCACTGGCGTCCATGAAAGGTTACAACATTGATGGGAACAGAGAAATGGTTGCGTTAGGCTTCATGAACCTAGCCGGCTCTCTCACTTCTTGCTACGCAGCAACAGGTTCTCTGTCACGGTCGGCGGTTAATTTCAGTGCCGGGTGCGAGACCGCGGTTTCGAACGTGGTGATGGCGGTGACGGTGATGATATCATTGGAGATGTTCACCAAGCTCCTCTACTTCACTCCCAACGCCATTCTTGCTTCCATTATTCTATCTGCACTTCCAGGCCTTATTGATCTTCACAAAGCTTACAATATCTGGAAGATCGACAAGCTCGACTTCTTGGCTTGCCTTGCAGCTTTTCTTGGTGTTCTCTTTCTCTCCGTCGAATTCGGCCTCCTCCTTTCGTTAGTGATATCATTTGCAAAGATAATAGTAATCTCAATCAAACCTGGGACTGAGATATTGGGAAAACTCCCTGGAAGTGATACCTTCTGTGATATTCACCAATATCCAATGGCTCTCAATACTCCTGGAGTCCTCATCATCCGTGTTAAATCTGGCTTACTTTGCTTTGCAAATGCCAACTTCGTCAAAGATAGGATTCTGAGGTTCATCAGCAGCCAAGAAGATGCATCAGCAAAGAGAATCACTAACTTCCTAGTCATTGATCTCTCCAACTTAATGAACATTGACACTTCAGGAATTGCTTCTCTTGAAGAGCTGCAGAATAGTTTGGCAGCCAGTGGAATAGAGTTGGCCATTGCAAATCCAAAGTGGCAAGTGATTCACAAGCTAAAGGTAGCAAATTTTGTTGCCAAGCTCAAAGGGAGGGTGTTCTTGAGTGTTGGGGAAGCTGTGGATGCTTGCCTTACAGCTAAAATGGGAGCTATCTAA 1968 48.37 MSVANADTSLTMSDVSTVEKSSPAERAEWVANPPEPPGIWREVIESLRDTMFPDPNKLSSLKNKTGTAVVGSLLQGVFPILCWGQSYNLGKFKNDILAGLTLASLCIPQSIGYANLAKLDPQYGLYTSIVPPLVYAVLGSSREIAIGPVAIVSLLLPSMIQKIQDPAADPLAYKNLVFTVTFFAGIFQAAFGLFRLGFLVDFLSHAAIVGFMGGAAIVIGLQQLKGLLGITHFTNKTDILSVMEAVFGSFHHHNDQWNPFNFIIGSSFLSFILITKLLGNKYKKVFWLAAIAPLLCVILSTLLVFLTRADRQGVKIVKRVPAGLNPISARHIQIHSPHFSQILNAAFIVAVIALTEAIAVGRSLASMKGYNIDGNREMVALGFMNLAGSLTSCYAATGSLSRSAVNFSAGCETAVSNVVMAVTVMISLEMFTKLLYFTPNAILASIILSALPGLIDLHKAYNIWKIDKLDFLACLAAFLGVLFLSVEFGLLLSLVISFAKIIVISIKPGTEILGKLPGSDTFCDIHQYPMALNTPGVLIIRVKSGLLCFANANFVKDRILRFISSQEDASAKRITNFLVIDLSNLMNIDTSGIASLEELQNSLAASGIELAIANPKWQVIHKLKVANFVAKLKGRVFLSVGEAVDACLTAKMGAI 655
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 27497846 27506706 - CrPI670011_07g013110.1 Cre07g1311 503892
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre07g1311 655 CDD STAS_SulP_like_sulfate_transporter 528 638 - -
Cre07g1311 655 MobiDBLite consensus disorder prediction 1 20 - -
Cre07g1311 655 MobiDBLite consensus disorder prediction 1 33 - -
Cre07g1311 655 SUPERFAMILY SpoIIaa-like 534 647 IPR036513 -
Cre07g1311 655 PANTHER SULFATE TRANSPORTER 68 648 IPR001902 GO:0005887(PANTHER)|GO:0016020(InterPro)|GO:0055085(InterPro)
Cre07g1311 655 Pfam Sulfate permease family 92 476 IPR011547 GO:0016020(InterPro)
Cre07g1311 655 Pfam STAS domain 528 643 IPR002645 -
Cre07g1311 655 ProSiteProfiles STAS domain profile. 544 647 IPR002645 -
Cre07g1311 655 ProSitePatterns SLC26A transporters signature. 121 142 IPR018045 GO:0008271(InterPro)|GO:0008272(InterPro)
Cre07g1311 655 FunFam Sulfate transporter 31 507 650 - -
Cre07g1311 655 NCBIfam sulfate permease 79 638 IPR001902 GO:0016020(InterPro)|GO:0055085(InterPro)
Cre07g1311 655 Gene3D STAS domain 507 650 IPR036513 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre07g1311 Cre-Chr7:27497846 Cre11g1949 Cre-Chr11:31287786 6.10E-181 dispersed
Cre07g1311 Cre-Chr7:27497846 Cre03g1187 Cre-Chr3:12698964 2.10E-221 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre07g1311 K17469 - csv:116403192 1112.83